| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0447 |
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| Symbol | |
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| ID | 5192270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 516728 |
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| End bp | 517975 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584891 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001265801 |
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| Protein GI | 148545699 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.328312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATTG CAGTGCCCCT CAACGAAGGC GCGGGTTCAA GTCTCAAGCA GCGCCTCAAA
CACGCCGAGC GGGTCAACCG CTGGAAGGCG CAGGCGTTGA TCGCGCCGCT GGCGCTGTTT
CTTCTGCTGG TGTTCCTGGT GCCGATTGCG GCGCTGCTGT ACAAGAGCGT CGGCAACCCT
GAAGTGGTCG GCGGCCTGCC GCGCACGGTG GAAGTCATCA GCCAGTGGGA TGGCAAAAGC
CTGCCAGGCG AGGACGTTTA CAAGGCGCTG AGCCAGGATT TGGCCGAGTC GCGCAAGAAC
CAGACCCTTG GTGACCTTTC CAAACGCTTG AACATGGAGC TGGCCGGTTA CCGCAGCTTG
TTGACCAAGA CTGCCCGTGC ACTGCCCTTC AAGGCTGAGC CTGCCTCTTA TAAGGATGCG
TTGCAGGCTG TCGACGAGCG TTGGGGTGAC CCGGCTTATT GGCAGGCGAT CCGCCGCAAT
ACCAGTTCGG TGACTTCTTT CTACCTGTTG GCCTCGGTGG ACCATCGCAT CGATGACCTT
GGTGAGCTGG CCAAGGCCAC CCCGGACCAG GCCATTTACC TGGACATTTT TGTCCGTACC
CTGTGGATGG GGGTGGTGAT TACCACTATC TGCCTGGTAC TGGCCTACCC ACTGGCCTAC
TTGTTGGCCA ACCTGCCGAC CCGGCAGAGC AACCTGCTGA TGATTCTGGT GCTGTTGCCT
TTCTGGACAT CGATCCTGGT GCGGGTGGCG GCCTGGATCG TGCTGCTGCA GTCGGGCGGG
CTGATCAACA GCGCGCTGAT GGCCATGGGC ATCATCGACC AGCCGCTGGA GCTGGTGTTC
AACCGCACAG GTGTCTACAT CTCGATGGTG CACATCCTGC TGCCGTTCAT GATCCTGCCG
CTGTACAGCG TGATGAAGGG TATTTCCCCG AGCTACATGC GTGCGGCGAT CTCGCTGGGC
TGCCACCCGT TCGCCAGTTT CTGGCGGGTG TACTTCCCGC AGACTTACGC CGGTGTTGGC
GCCGGTTGCC TGTTGGTGTT CATCCTGGCC ATCGGTTACT ACATCACCCC GGCGCTGCTG
GGTAGCCCCA ACGACCAGAT GGTCAGCTAC TTCGTCGCCT TCTACACCAA CACCAGCATC
AACTGGGGCA TGGCCACCGC ACTGGGCGGG CTGTTGCTGC TGGCGACCGT GCTGTTGTAC
CTGATCTATA GCTGGCTGGT CGGCGCCAGC CGTCTGCGCC TGAGCTGA
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| Protein sequence | MAIAVPLNEG AGSSLKQRLK HAERVNRWKA QALIAPLALF LLLVFLVPIA ALLYKSVGNP
EVVGGLPRTV EVISQWDGKS LPGEDVYKAL SQDLAESRKN QTLGDLSKRL NMELAGYRSL
LTKTARALPF KAEPASYKDA LQAVDERWGD PAYWQAIRRN TSSVTSFYLL ASVDHRIDDL
GELAKATPDQ AIYLDIFVRT LWMGVVITTI CLVLAYPLAY LLANLPTRQS NLLMILVLLP
FWTSILVRVA AWIVLLQSGG LINSALMAMG IIDQPLELVF NRTGVYISMV HILLPFMILP
LYSVMKGISP SYMRAAISLG CHPFASFWRV YFPQTYAGVG AGCLLVFILA IGYYITPALL
GSPNDQMVSY FVAFYTNTSI NWGMATALGG LLLLATVLLY LIYSWLVGAS RLRLS
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