| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4001 |
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| Symbol | |
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| ID | 5110224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4374108 |
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| End bp | 4375355 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640505264 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001189480 |
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| Protein GI | 146309015 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCG TACTGCCTGC CACCGAGTTG CCCGGGCCGA GCCTGAAGCA GCGTCTGGCC
CGTGCCGAGC GTTTCAATCG TCTGAAATCC AAGGCGCTGA TCCTGCCGCT GTTGCTGTTC
CTTCTGCTGA CCTTCCTGTT GCCCATTGGC GCCCTGTTGC TGCGCAGCGT CGACAACCCG
GAAGTGGTCG GCAGTCTGCC GCGCACCGTC GAGGCGATCA GTGCCTGGGA TGGTCGTGGT
TTGCCGGACG AGTCGGTGTA CCAGGCCATT GCCAGCGACA TCGTCGAGGC GCGCCGCAAC
CAGAGCCTGG GCGATCTGTC CAAGCGCCTG AACATGGAGC TGGCGGGCTT TCGCAGTCTG
GTCAGCAGCA CCGCACGCAA GCTGCCGTTG CGCGAGGAGC CGGCGTCCTA CCAGGAGGCC
TTCCTCGACC TGGACGAGCG CTGGGGCGAT CCCGCCTATT GGCAGGTGAT CCGCCGCAAC
GCCTCGCCGG TCACGCCCTA TTACCTGCTG GCTGCGCTCG ATCATCGTAT CGACGATCTC
GGTGAGCTGG CCAAGGCCAC GCCGGATCAG GCCATCTATC TGGACATCTT CGCCCGCACC
TTCTGGATGA GCCTGGTGAT CACCGCCATT TGCCTGGTGC TGGCCTATCC GTTGGCTTAT
CTGCTGGCCA ACCTGCCGAC CCGCTCCGGC AACCTGTTGA TGATTCTGGT GCTGCTGCCG
TTCTGGACCT CGATTCTGGT GCGGGTGGCG GCCTGGATCG TGCTGTTGCA GTCGGGCGGA
TTGATCAACA GTGCGCTGAT GTCGCTGGGC ATCATCGAGC AGCCCCTGCA GCTGGTGTTC
AACCGCAGTG GTGTTTACGT GGCCATGGTG CACATCATGC TGCCGTTCAT GATCCTGCCG
ATCTACAGCG TGATGAAGGG CATCTCGCCC AGCTACATGC GCGCGGCGGT GTCGCTCGGC
TGTCATCCGT TCGCCAGTTT CTGGCGGGTG TACTTCCCGC AGACCCTGGC CGGTGTCGGC
GCCGGTTGCC TGCTGGTGTT CATCCTGTCC ATCGGCTACT ACATCACCCC GGCGCTGCTG
GGCAGCCCGA ACGACCAGAT GATCAGCTAC TTCGTCGCCT TCTACACCAA CACCACCATC
AACTGGGGCA TGGCCACGGC CCTTGGCGGC CTGTTGCTGG CTGCGACCCT GGTGCTTTAC
GTGGTGTACA GCTGGCTGGT CGGTGCCAGC AAGCTGAGGC TTGGTTAA
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| Protein sequence | MAAVLPATEL PGPSLKQRLA RAERFNRLKS KALILPLLLF LLLTFLLPIG ALLLRSVDNP
EVVGSLPRTV EAISAWDGRG LPDESVYQAI ASDIVEARRN QSLGDLSKRL NMELAGFRSL
VSSTARKLPL REEPASYQEA FLDLDERWGD PAYWQVIRRN ASPVTPYYLL AALDHRIDDL
GELAKATPDQ AIYLDIFART FWMSLVITAI CLVLAYPLAY LLANLPTRSG NLLMILVLLP
FWTSILVRVA AWIVLLQSGG LINSALMSLG IIEQPLQLVF NRSGVYVAMV HIMLPFMILP
IYSVMKGISP SYMRAAVSLG CHPFASFWRV YFPQTLAGVG AGCLLVFILS IGYYITPALL
GSPNDQMISY FVAFYTNTTI NWGMATALGG LLLAATLVLY VVYSWLVGAS KLRLG
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