More than 300 homologs were found in PanDaTox collection
for query gene HY04AAS1_0554 on replicon NC_011126
Organism: Hydrogenobaculum sp. Y04AAS1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011126  HY04AAS1_0554  Carbamoyl-phosphate synthase L chain ATP-binding  100 
 
 
528 aa  1067    Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00479073  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0583  MGS domain protein  62.5 
 
 
530 aa  676    Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.774187  n/a   
 
 
-
 
NC_008009  Acid345_2197  carbamoyl-phosphate synthase large subunit  55.39 
 
 
1102 aa  585  1.0000000000000001e-165  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1852  carbamoyl-phosphate synthase, large subunit  53.61 
 
 
1072 aa  581  1e-164  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1981  carbamoyl-phosphate synthase large subunit  54.32 
 
 
1078 aa  578  1.0000000000000001e-163  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  decreased coverage  0.00635498 
 
 
-
 
NC_010814  Glov_2079  carbamoyl-phosphate synthase, large subunit  54.91 
 
 
1082 aa  574  1.0000000000000001e-162  Geobacter lovleyi SZ  Bacteria  normal  0.0359545  n/a   
 
 
-
 
NC_007794  Saro_2230  carbamoyl phosphate synthase large subunit  51.89 
 
 
1107 aa  574  1.0000000000000001e-162  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.497608  n/a   
 
 
-
 
NC_011769  DvMF_2306  carbamoyl-phosphate synthase, large subunit  55.05 
 
 
1078 aa  574  1.0000000000000001e-162  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009634  Mevan_0341  carbamoyl-phosphate synthase, large subunit  55.47 
 
 
1081 aa  571  1e-161  Methanococcus vannielii SB  Archaea  normal  0.756805  n/a   
 
 
-
 
NC_007484  Noc_2572  carbamoyl-phosphate synthase, large subunit, glutamine-dependent  52.75 
 
 
1073 aa  570  1e-161  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.0164695  n/a   
 
 
-
 
NC_013889  TK90_0699  carbamoyl-phosphate synthase, large subunit  54.37 
 
 
1077 aa  571  1e-161  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.133334  normal  0.0796001 
 
 
-
 
NC_008048  Sala_0985  carbamoyl phosphate synthase large subunit  53.98 
 
 
1106 aa  570  1e-161  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.557617  normal 
 
 
-
 
NC_008789  Hhal_1775  carbamoyl-phosphate synthase, large subunit  54.3 
 
 
1073 aa  569  1e-161  Halorhodospira halophila SL1  Bacteria  normal  0.0103005  n/a   
 
 
-
 
NC_008609  Ppro_2524  carbamoyl-phosphate synthase, large subunit  54.48 
 
 
1078 aa  571  1e-161  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0237548  n/a   
 
 
-
 
NC_007517  Gmet_1774  carbamoyl-phosphate synthase large subunit  53.9 
 
 
1081 aa  566  1e-160  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000157385  normal  0.0854041 
 
 
-
 
NC_007947  Mfla_0779  carbamoyl-phosphate synthase large subunit  52.47 
 
 
1068 aa  565  1e-160  Methylobacillus flagellatus KT  Bacteria  normal  0.0332696  hitchhiker  0.000231672 
 
 
-
 
NC_011901  Tgr7_0977  carbamoyl-phosphate synthase, large subunit  53.04 
 
 
1072 aa  565  1e-160  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.270817  n/a   
 
 
-
 
NC_009719  Plav_2313  carbamoyl-phosphate synthase, large subunit  53.7 
 
 
1079 aa  564  1.0000000000000001e-159  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.417995  normal  0.014378 
 
 
-
 
NC_009511  Swit_0438  carbamoyl phosphate synthase large subunit  52.64 
 
 
1110 aa  563  1.0000000000000001e-159  Sphingomonas wittichii RW1  Bacteria  normal  0.561352  normal 
 
 
-
 
NC_012560  Avin_42930  carbamoyl phosphate synthase large subunit  54.33 
 
 
1073 aa  563  1.0000000000000001e-159  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3358  carbamoyl-phosphate synthase, large subunit  54.42 
 
 
1072 aa  563  1.0000000000000001e-159  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1276  carbamoyl-phosphate synthase, large subunit  53.33 
 
 
1081 aa  559  1e-158  Geobacter sulfurreducens PCA  Bacteria  normal  0.104945  n/a   
 
 
-
 
NC_009135  MmarC5_0581  carbamoyl-phosphate synthase large subunit  53.21 
 
 
1081 aa  560  1e-158  Methanococcus maripaludis C5  Archaea  normal  0.600476  n/a   
 
 
-
 
NC_002947  PP_4723  carbamoyl phosphate synthase large subunit  53.54 
 
 
1073 aa  555  1e-157  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00575089 
 
 
-
 
NC_009656  PSPA7_5476  carbamoyl phosphate synthase large subunit  53.24 
 
 
1073 aa  556  1e-157  Pseudomonas aeruginosa PA7  Bacteria  normal  0.783479  n/a   
 
 
-
 
NC_010322  PputGB1_4724  carbamoyl phosphate synthase large subunit  53.54 
 
 
1073 aa  555  1e-157  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A0479  carbamoyl-phosphate synthase, large subunit  51.69 
 
 
1075 aa  556  1e-157  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2728  carbamoyl phosphate synthase large subunit  53.04 
 
 
1077 aa  557  1e-157  Saccharophagus degradans 2-40  Bacteria  normal  0.523784  normal 
 
 
-
 
NC_009975  MmarC6_1646  carbamoyl-phosphate synthase, large subunit  53.31 
 
 
1081 aa  556  1e-157  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_013173  Dbac_3211  carbamoyl-phosphate synthase, large subunit  53.6 
 
 
1082 aa  556  1e-157  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_62910  carbamoyl phosphate synthase large subunit  53.24 
 
 
1073 aa  556  1e-157  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0008  carbamoyl phosphate synthase large subunit  51.91 
 
 
1080 aa  557  1e-157  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.196188  normal 
 
 
-
 
NC_010501  PputW619_0709  carbamoyl phosphate synthase large subunit  53.54 
 
 
1073 aa  557  1e-157  Pseudomonas putida W619  Bacteria  normal  normal  0.0416816 
 
 
-
 
NC_009637  MmarC7_0255  carbamoyl-phosphate synthase, large subunit  53.02 
 
 
1081 aa  557  1e-157  Methanococcus maripaludis C7  Archaea  normal  0.527098  normal  0.0694111 
 
 
-
 
NC_012918  GM21_2308  carbamoyl-phosphate synthase, large subunit  53.24 
 
 
1082 aa  552  1e-156  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_4501  carbamoyl-phosphate synthase, large subunit  53.35 
 
 
1073 aa  554  1e-156  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4191  carbamoyl phosphate synthase large subunit  53.35 
 
 
1073 aa  553  1e-156  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.725714  normal 
 
 
-
 
NC_007404  Tbd_1128  carbamoyl-phosphate synthase large subunit  53.13 
 
 
1068 aa  554  1e-156  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0767  carbamoyl phosphate synthase large subunit  53.35 
 
 
1073 aa  552  1e-156  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.256868  normal  0.1584 
 
 
-
 
NC_007519  Dde_0333  carbamoyl-phosphate synthase large subunit  51.81 
 
 
1087 aa  552  1e-156  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.639877  n/a   
 
 
-
 
NC_009635  Maeo_0045  carbamoyl-phosphate synthase L chain ATP-binding  51.79 
 
 
604 aa  552  1e-156  Methanococcus aeolicus Nankai-3  Archaea  normal  0.308823  n/a   
 
 
-
 
NC_009675  Anae109_2072  carbamoyl phosphate synthase large subunit  51.89 
 
 
1083 aa  553  1e-156  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.471557 
 
 
-
 
NC_012856  Rpic12D_1726  carbamoyl phosphate synthase large subunit  51.04 
 
 
1081 aa  553  1e-156  Ralstonia pickettii 12D  Bacteria  normal  normal  0.746976 
 
 
-
 
NC_009439  Pmen_3620  carbamoyl phosphate synthase large subunit  53.35 
 
 
1073 aa  554  1e-156  Pseudomonas mendocina ymp  Bacteria  normal  0.830394  normal 
 
 
-
 
NC_009483  Gura_1864  carbamoyl-phosphate synthase, large subunit  54.39 
 
 
1082 aa  554  1e-156  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000611023  n/a   
 
 
-
 
NC_010682  Rpic_2034  carbamoyl phosphate synthase large subunit  51.04 
 
 
1081 aa  553  1e-156  Ralstonia pickettii 12J  Bacteria  normal  0.305177  normal 
 
 
-
 
NC_008825  Mpe_A1262  carbamoyl-phosphate synthase large subunit  51.48 
 
 
1090 aa  551  1e-156  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.0303508 
 
 
-
 
NC_009512  Pput_4589  carbamoyl phosphate synthase large subunit  53.35 
 
 
1055 aa  554  1e-156  Pseudomonas putida F1  Bacteria  normal  0.387511  normal 
 
 
-
 
NC_008751  Dvul_2806  carbamoyl-phosphate synthase, large subunit  52.38 
 
 
1077 aa  555  1e-156  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1521  carbamoyl phosphate synthase large subunit  50.47 
 
 
1081 aa  549  1e-155  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp2678  carbamoyl-phosphate synthase large subunit  53.24 
 
 
1067 aa  550  1e-155  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2550  carbamoyl-phosphate synthase large subunit  53.24 
 
 
1067 aa  548  1e-155  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_0939  carbamoyl phosphate synthase large subunit  51.99 
 
 
1068 aa  551  1e-155  Dechloromonas aromatica RCB  Bacteria  normal  0.245842  normal 
 
 
-
 
NC_011146  Gbem_1900  carbamoyl-phosphate synthase, large subunit  53.24 
 
 
1082 aa  550  1e-155  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00662116  n/a   
 
 
-
 
NC_013223  Dret_0320  carbamoyl-phosphate synthase, large subunit  51.43 
 
 
1078 aa  548  1e-155  Desulfohalobium retbaense DSM 5692  Bacteria  unclonable  0.000000336143  normal 
 
 
-
 
NC_011206  Lferr_0789  carbamoyl-phosphate synthase, large subunit  54.55 
 
 
1079 aa  550  1e-155  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_0711  carbamoyl phosphate synthase large subunit  52.43 
 
 
1097 aa  550  1e-155  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0639  carbamoyl-phosphate synthase, large subunit  54.55 
 
 
1079 aa  550  1e-155  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0911  carbamoyl phosphate synthase large subunit  53.28 
 
 
1081 aa  550  1e-155  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0976  carbamoyl phosphate synthase large subunit  51.81 
 
 
1073 aa  548  1e-155  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_3031  carbamoyl phosphate synthase large subunit  52.92 
 
 
1084 aa  545  1e-154  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.144026  decreased coverage  0.0049366 
 
 
-
 
NC_011830  Dhaf_0352  carbamoyl phosphate synthase large subunit  50.85 
 
 
1075 aa  546  1e-154  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000999114  n/a   
 
 
-
 
NC_007204  Psyc_0814  carbamoyl-phosphate synthase large subunit  50.28 
 
 
1084 aa  545  1e-154  Psychrobacter arcticus 273-4  Bacteria  normal  0.253705  normal  0.0427985 
 
 
-
 
NC_007347  Reut_A2175  carbamoyl phosphate synthase large subunit  51.04 
 
 
1082 aa  547  1e-154  Ralstonia eutropha JMP134  Bacteria  normal  0.321083  n/a   
 
 
-
 
NC_009943  Dole_1446  carbamoyl phosphate synthase large subunit  51.9 
 
 
1066 aa  545  1e-154  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1732  carbamoyl phosphate synthase large subunit  52.93 
 
 
1076 aa  545  1e-154  Thauera sp. MZ1T  Bacteria  normal  0.215987  n/a   
 
 
-
 
NC_010717  PXO_00086  carbamoyl phosphate synthase large subunit  51.02 
 
 
1080 aa  546  1e-154  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0874  carbamoyl phosphate synthase large subunit  50.56 
 
 
1084 aa  546  1e-154  Burkholderia phymatum STM815  Bacteria  normal  normal  0.176638 
 
 
-
 
NC_007643  Rru_A2886  carbamoyl phosphate synthase large subunit  51.61 
 
 
1082 aa  545  1e-154  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.827795  n/a   
 
 
-
 
NC_007969  Pcryo_0829  carbamoyl-phosphate synthase, large subunit  50.65 
 
 
1112 aa  546  1e-154  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_2193  carbamoyl phosphate synthase large subunit  50.85 
 
 
1082 aa  545  1e-154  Cupriavidus metallidurans CH34  Bacteria  normal  0.0442347  normal  0.129534 
 
 
-
 
NC_009720  Xaut_2750  carbamoyl-phosphate synthase, large subunit  51 
 
 
1120 aa  546  1e-154  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1812  carbamoyl phosphate synthase large subunit  51.41 
 
 
1080 aa  546  1e-154  Stenotrophomonas maltophilia R551-3  Bacteria  decreased coverage  0.00557421  normal  0.0258544 
 
 
-
 
NC_008553  Mthe_1254  carbamoyl phosphate synthase large subunit  53.47 
 
 
1074 aa  547  1e-154  Methanosaeta thermophila PT  Archaea  normal  0.179154  n/a   
 
 
-
 
NC_009654  Mmwyl1_4034  carbamoyl-phosphate synthase, large subunit  52.09 
 
 
1071 aa  542  1e-153  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00188727  normal 
 
 
-
 
NC_009901  Spea_3074  carbamoyl phosphate synthase large subunit  50.48 
 
 
1073 aa  542  1e-153  Shewanella pealeana ATCC 700345  Bacteria  normal  0.581012  n/a   
 
 
-
 
NC_011666  Msil_0672  carbamoyl-phosphate synthase, large subunit  49.73 
 
 
1107 aa  542  1e-153  Methylocella silvestris BL2  Bacteria  n/a    normal  0.715776 
 
 
-
 
NC_007498  Pcar_1612  carbamoyl-phosphate synthase large subunit  51.81 
 
 
1084 aa  542  1e-153  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000225246  n/a   
 
 
-
 
NC_007510  Bcep18194_A4434  carbamoyl phosphate synthase large subunit  50.75 
 
 
1084 aa  543  1e-153  Burkholderia sp. 383  Bacteria  normal  0.901891  normal 
 
 
-
 
NC_009635  Maeo_0467  carbamoyl-phosphate synthase, large subunit  54.67 
 
 
1061 aa  545  1e-153  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007520  Tcr_0879  carbamoyl-phosphate synthase, large subunit  53.15 
 
 
1070 aa  544  1e-153  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1263  carbamoyl phosphate synthase large subunit  50.75 
 
 
1084 aa  543  1e-153  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.522789  normal  0.213082 
 
 
-
 
NC_007954  Sden_0996  carbamoyl phosphate synthase large subunit  51.05 
 
 
1075 aa  543  1e-153  Shewanella denitrificans OS217  Bacteria  normal  0.846706  n/a   
 
 
-
 
NC_008060  Bcen_0811  carbamoyl phosphate synthase large subunit  50.75 
 
 
1084 aa  543  1e-153  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1292  carbamoyl phosphate synthase large subunit  50.75 
 
 
1084 aa  543  1e-153  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A0075  carbamoyl phosphate synthase large subunit  50.86 
 
 
1075 aa  540  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1217  carbamoyl-phosphate synthase, large subunit  50.27 
 
 
1157 aa  541  9.999999999999999e-153  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_2232  carbamoyl phosphate synthase large subunit  51.81 
 
 
1079 aa  541  9.999999999999999e-153  Desulfotomaculum reducens MI-1  Bacteria  normal  0.251597  n/a   
 
 
-
 
NC_007651  BTH_I2781  carbamoyl phosphate synthase large subunit  50.37 
 
 
1084 aa  538  9.999999999999999e-153  Burkholderia thailandensis E264  Bacteria  normal  0.0855395  n/a   
 
 
-
 
NC_007760  Adeh_1729  carbamoyl phosphate synthase large subunit  50.47 
 
 
1077 aa  538  9.999999999999999e-153  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0833  carbamoyl-phosphate synthase, large subunit  50.1 
 
 
1086 aa  541  9.999999999999999e-153  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00324716  normal 
 
 
-
 
NC_011149  SeAg_B0074  carbamoyl phosphate synthase large subunit  50.86 
 
 
1075 aa  540  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C0071  carbamoyl phosphate synthase large subunit  50.86 
 
 
1075 aa  540  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_2028  carbamoyl phosphate synthase large subunit  50.94 
 
 
1084 aa  541  9.999999999999999e-153  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A0071  carbamoyl phosphate synthase large subunit  50.86 
 
 
1075 aa  540  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.423134  normal 
 
 
-
 
NC_010172  Mext_1088  carbamoyl-phosphate synthase, large subunit  50.27 
 
 
1157 aa  541  9.999999999999999e-153  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.464939 
 
 
-
 
NC_008554  Sfum_3911  carbamoyl phosphate synthase large subunit  52 
 
 
1066 aa  539  9.999999999999999e-153  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.123492 
 
 
-
 
NC_008577  Shewana3_0968  carbamoyl phosphate synthase large subunit  50 
 
 
1074 aa  538  9.999999999999999e-153  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0073  carbamoyl phosphate synthase large subunit  50.86 
 
 
1075 aa  540  9.999999999999999e-153  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.841404  normal 
 
 
-
 
NC_010498  EcSMS35_0033  carbamoyl phosphate synthase large subunit  50.95 
 
 
1073 aa  538  9.999999999999999e-153  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
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