| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0968 |
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| Symbol | carB |
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| ID | 4478894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1135404 |
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| End bp | 1138628 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725501 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_868609 |
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| Protein GI | 117919417 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT AAAGAGTATT CTTATCCTAG GTGCAGGCCC AATTGTTATT
GGTCAGGCGT GTGAATTCGA CTATTCAGGC GCTCAAGCCT GTAAAGCCCT GCGTGAAGAA
GGTTACCGCG TCATTCTGGT GAACTCTAAC CCTGCCACCA TTATGACCGA CCCTGAAATG
GCCGATGCCA CTTACATCGA GCCAATCCAA TGGGAAGTGG TACGTAACAT TATCGCGAAA
GAACGTCCTG ATGCGATTCT GCCAACCATG GGCGGTCAAA CCGCGCTGAA CTGCGCCCTT
GAGCTTGAAG CCAAAGGCGT ACTGGCTGAA TTCAACGTTG AAATGATCGG TGCAACCGCC
GATGCGATTG ATAAAGCAGA AGACCGTAGC CGCTTTGACA AAGCCATGAA GAGCATCGGC
TTAGAGTGCC CACGCGCGGG CATCGCCCAC AGCATGGAAG AAGCCTATGG TGTACTCGAC
CTCGTTGGTT TCCCTTGTAT TATCCGTCCA TCATTCACTA TGGGTGGCTC GGGCGGTGGT
ATCGCCTACA ACAAGGAAGA GTTCGAAGAA ATCTGTTCTC AAGGTTTAGA TTTATCGCCA
ACTAAAGAGC TACTCATCGA CGAGAGCTTA ATTGGTTGGA AAGAATACGA GATGGAAGTG
GTTCGTGACC GTAACGACAA CTGCATCATC GTCTGTTCTA TCGAAAACTT TGATCCAATG
GGCGTGCACA CCGGTGACTC TATTACCGTT GCCCCAGCGC AGACCCTGAC TGACAAAGAA
TACCAACTGA TGCGTAACGC CTCTATGGCG GTACTGCGTG AGATTGGTGT TGAAACTGGT
GGTTCGAACG TACAGTTTGG TATCAACCCG AAAGATGGCC GTATGGTTAT CATCGAGATG
AACCCACGCG TATCACGTTC ATCGGCACTG GCGTCTAAAG CAACGGGCTT CCCGATTGCG
AAAATCGCCG CCAAGTTAGC GGTCGGTTTC ACTCTTGATG AGCTGATGAA CGACATCACT
GGTGGCCGTA CGCCAGCGTC ATTCGAGCCA GCTATCGACT ACGTCGTGAC TAAAGTACCT
CGCTTTAACT TTGAAAAGTT TGCTGGCTCA AACGATCGCT TAACCACTCA GATGAAGTCA
GTGGGCGAAG TCATGGCGAT TGGCCGTACT TTCCAAGAGT CACTGCAAAA AGCCCTGCGC
GGTTTAGAAG TGAGCCGTCA CGGTTTTGAC CCAATCACTG ACTTAACCAA AGCCGATGCA
CTAGCGCGTA TTCGCCTCGA GCTGAAAGAG CCAGGCTGTG ACCGTATTTG GTACATCGCC
GATGCGATGC GTGCGGGTTT AACCCTGGAT GAAATCTTCC GTTTAACCAA CATCGACCCA
TGGTTCTTAG TTCAGATTGA AGAGCTGATT AAGCTGGAAG GCCAAGTGGC CGAAGGTGGT
TTAGCCGGTC TTAACGAAGA GCTGCTGCGT AAGCTTAAGC GTAAAGGCTT TGCCGATGCG
CGTCTGGCGG CGGTCCTTGG CGTAAACGAG ACTGAAGTCC GTAAACTGCG TGACCGTTTC
GACATCCACC CAGTGTACAA GCGCGTAGAT ACCTGTGCGG CTGAATTTGC TACTGATACT
GCTTACATGT ACTCAACCTA TGAGGAAGAG TGTGAAGCGA ACCCATCAGA CCGTGAGAAA
ATCATGGTGT TAGGTGGCGG TCCAAACCGT ATCGGTCAAG GTATCGAATT CGATTACTGT
TGTGTGCACG CGGCATTAGC CCTGCGTGAA GACGGTTATG AAACTATCAT GGTTAACTGT
AACCCTGAAA CCGTTTCTAC CGACTATGAC ACTTCAGATC GTCTGTACTT CGAGCCTGTT
ACCCTAGAAG ACGTATTAGA AATCGTCCGT ATCGAGAAGC CAAAGGGCGT TATCGTACAG
TACGGTGGTC AAACTCCGCT GAAACTGGCT CGTGCCCTTG AAGCGGCAGG TGTGCCCATT
ATTGGTACTA GCCCTGATGC GATTGACCGT GCAGAAGACC GTGAGCGTTT CCAGCAAGCG
ATTCAACGCT TGGAAATGAA GCAACCTGAA AACGATACAG TCACCACAGT TGAAGGTGCT
GTGATTGCCG CTGAGCGTAT CGGTTATCCA TTAGTTGTTC GTCCATCCTA CGTACTGGGC
GGCCGCGCGA TGGAAATCGT GTACGACCAA CAGGATTTAC TGCGTTACTT CAACGAAGCG
GTAAGCGTAT CTAACGCTTC GCCAGTACTG TTAGACCACT TCCTAGACGA TGCTATCGAA
GTGGATATCG ACGCCGTATG TGACGGTGAA ACTGTAGTTA TCGGCGCGAT CATGGAGCAT
ATCGAGCAGG CGGGTGTTCA CTCAGGTGAC TCTGGCTGTT CACTGCCTCC TTACACCTTA
AGCCAAGCTA TCCAAGACGA AATGCGCGTA CAAGTGCGTA AGCTTGCGAT GGAGCTGGGT
GTTGTCGGTC TGATGAACGT ACAGTTTGCC GTGAAGAATA ACGAAATCTA CATGATTGAA
GTTAACCCAC GTGCAGCGCG TACCGTGCCA TTCGTATCGA AAGCGACAGG TGTACCGTTA
GCTAAGATTG CCGCCCGTGT GATGGCGGGT CAAAGCTTGA AGGCGCAAAA CTTCACTCAA
GAAGTGATCC CACCTTTCTA CTCAGTGAAA GAAGTGGTAC TGCCATTTAA CAAGTTCCCT
GGCGTTGACC CACTGTTAGG CCCTGAAATG CGCTCAACAG GTGAGGTGAT GGGCGTGGGC
GATACCTTCG CCGAAGCCTA TGCTAAGGCG CAGTTAGGTG CGACTTCTGA AGTGCCTAAG
TCTGGTCGTG CTCTGTTGTC TGTGCGTAAC AGCGACAAGA AACGTGTTGC CGACTTAGCC
GCTAAGTTGA TTGAGCTGGG TTATCAAATT GATGCCACCC ACGGTACCGC GGTTATCCTA
GGTGAAGCGG GTATCAACCC ACGCTTAGTG AACAAGGTAC ACGAAGGCCG TCCACACATT
CTTGACCGCA TCAAGAACGG TGAGTACACC TATATCGTGA ACACCACCGA AGGCCGTCAA
GCGATTGAAG ACTCTCGTCA ATTACGTCGC GGTGCACTGC GTTACAAAGT GAACTACACC
ACGACCATGA ACGCAGCATT CGCCACTTGT ATGGCACACG CTGCGGACGA CCGCACTAAC
GTGACCTCAG TGCAAGAGCT GCATCAGCGC GTATTGGCTA AATAA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIQ WEVVRNIIAK ERPDAILPTM GGQTALNCAL ELEAKGVLAE FNVEMIGATA
DAIDKAEDRS RFDKAMKSIG LECPRAGIAH SMEEAYGVLD LVGFPCIIRP SFTMGGSGGG
IAYNKEEFEE ICSQGLDLSP TKELLIDESL IGWKEYEMEV VRDRNDNCII VCSIENFDPM
GVHTGDSITV APAQTLTDKE YQLMRNASMA VLREIGVETG GSNVQFGINP KDGRMVIIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGF TLDELMNDIT GGRTPASFEP AIDYVVTKVP
RFNFEKFAGS NDRLTTQMKS VGEVMAIGRT FQESLQKALR GLEVSRHGFD PITDLTKADA
LARIRLELKE PGCDRIWYIA DAMRAGLTLD EIFRLTNIDP WFLVQIEELI KLEGQVAEGG
LAGLNEELLR KLKRKGFADA RLAAVLGVNE TEVRKLRDRF DIHPVYKRVD TCAAEFATDT
AYMYSTYEEE CEANPSDREK IMVLGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPV TLEDVLEIVR IEKPKGVIVQ YGGQTPLKLA RALEAAGVPI
IGTSPDAIDR AEDRERFQQA IQRLEMKQPE NDTVTTVEGA VIAAERIGYP LVVRPSYVLG
GRAMEIVYDQ QDLLRYFNEA VSVSNASPVL LDHFLDDAIE VDIDAVCDGE TVVIGAIMEH
IEQAGVHSGD SGCSLPPYTL SQAIQDEMRV QVRKLAMELG VVGLMNVQFA VKNNEIYMIE
VNPRAARTVP FVSKATGVPL AKIAARVMAG QSLKAQNFTQ EVIPPFYSVK EVVLPFNKFP
GVDPLLGPEM RSTGEVMGVG DTFAEAYAKA QLGATSEVPK SGRALLSVRN SDKKRVADLA
AKLIELGYQI DATHGTAVIL GEAGINPRLV NKVHEGRPHI LDRIKNGEYT YIVNTTEGRQ
AIEDSRQLRR GALRYKVNYT TTMNAAFATC MAHAADDRTN VTSVQELHQR VLAK
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