| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4724 |
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| Symbol | carB |
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| ID | 5872537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5277158 |
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| End bp | 5280379 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549862 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001670946 |
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| Protein GI | 167035715 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGACAT CAAAAGCATC CTGATTCTCG GCGCTGGCCC GATCGTGATC
GGCCAGGCCT GCGAATTCGA CTACTCCGGC GCCCAGGCCT GTAAAGCCCT GCGCGAGGAA
GGTTTCCGCG TCATCCTGGT GAACTCCAAC CCAGCCACCA TCATGACCGA CCCGGCCATG
GCCGACGCCA CCTACATCGA GCCGATCAAG TGGCAGTCGG TGGCCAAGAT CATCGAGAAA
GAGCGCCCAG ACGCCGTATT GCCGACCATG GGTGGCCAGA CTGCACTGAA CTGCGCCCTG
GACCTGGAGC GCCACGGCGT TCTGGAGAAG TTCGGCGTAG AGATGATCGG TGCCAACGCC
GACACCATCG ACAAGGCTGA AGACCGTTCG CGCTTCGACA AGGCGATGAA GGACATCGGC
CTGGAGTGCC CGCGCTCCGG TATCGCCCAC AGCATGGAAG AGGCCAATGC GGTCCTCGAG
AAGCTCGGCT TCCCATGCAT CATCCGCCCG TCGTTCACCA TGGGTGGCAC TGGCGGTGGT
ATTGCTTACA ACCGTGAAGA GTTCGAAGAA ATCTGCACCC GTGGTCTGGA CCTGTCGCCG
ACCAAAGAGC TGCTGATCGA CGAATCGCTG ATCGGCTGGA AAGAGTACGA GATGGAAGTG
GTCCGCGACA AAAAGGACAA CTGCATCATC GTCTGCTCCA TCGAAAACTT CGACCCGATG
GGTGTGCACA CCGGTGACTC GATCACTGTC GCTCCGGCAC AGACCCTGAC CGACAAGGAA
TACCAGATCA TGCGCAACGC CTCGCTGGCG GTGCTGCGTG AAATCGGTGT GGAAACCGGC
GGTTCCAACG TGCAGTTCGG CATTTGCCCG AACACTGGCC GTATGGTCGT GATCGAGATG
AACCCGCGCG TTTCGCGTTC GTCCGCCCTG GCTTCCAAGG CTACCGGCTT CCCGATCGCC
AAGATCGCCG CCAAGCTGGC CATTGGCTAC ACCCTCGACG AGCTGCAGAA CGACATCACT
GGCGGCCGCA CCCCGGCTTC CTTCGAGCCG TCGATCGACT ACGTCGTCAC CAAGCTGCCA
CGCTTCGCCT TCGAGAAATT CCCGAAAGCC GACGCCCGCC TGACCACCCA AATGAAATCC
GTGGGTGAAG TCATGGCCAT CGGCCGTACC TTCCAGGAAT CCCTGCAGAA AGCCCTGCGC
GGCCTGGAAG TCGGTGCTTG CGGCCTCGAC CCTAAAGTCG ACCTGGCCAG CCCGGAAGCT
GCCAGCATCC TCAAGCGCGA GCTGACCGTG CCGGGTGCCG AGCGTATCTG GTACGTGGCT
GACGCCATGC GTTCGGGCAT GACCTGTGAA GAAATCTTCG CCCTGACCGG TATCGACATG
TGGTTCCTGG TGCAGATGGA AGATCTGATC AAGGAAGAAG AGAAGGTCAA GACCCTGGCC
CTGTCGGCGA TCGACAAGGA CTACATGCTG CGCCTCAAGC GCAAGGGCTT CTCGGATCAG
CGTCTGGCTG TGTTGCTGGG CATCACCGAC AAGAACCTGC GCCGTCACCG CCACAAGCTG
GAAGTGTTCC CGGTGTACAA GCGCGTCGAC ACCTGCGCCG CCGAGTTCGC CACCGACACC
GCCTACCTGT ACTCCACCTA TGAGGAAGAG TGCGAGGCCA ACCCGTCGAC CCGCGACAAG
ATCATGATCC TGGGTGGCGG CCCTAACCGT ATCGGCCAGG GTATCGAGTT CGACTACTGC
TGCGTACACG CTGCCCTGGC GCTGCGTGAA GACGGTTACG AGACCATCAT GGTCAACTGC
AACCCGGAAA CTGTCTCTAC CGACTACGAC ACTTCCGACC GTCTGTACTT CGAGCCGCTG
ACCCTGGAAG ACGTGCTGGA AGTCTGCCGC GTCGAGAAGC CGAAAGGCGT GATCGTTCAC
TACGGCGGCC AGACCCCGCT GAAACTGGCC CGCGCTCTGG AAGAAGCTGG CGTACCGATC
ATCGGTACCA GTCCTGACGC CATCGACCGC GCCGAAGACC GTGAGCGCTT CCAGCAGATG
GTTCAGCGCC TGAGCCTGCT GCAGCCGCCA AACGCCACCG TGCGCAGTGA AGAAGAAGCC
ATCCGCGCTG CGGGCGGCAT CGGTTACCCG CTGGTTGTGC GCCCATCCTA CGTACTGGGC
GGCCGCGCCA TGGAAATCGT CTACGAGCTG GACGAGCTGA AGCGCTACCT GCGTGAAGCG
GTTCAGGTGT CGAACGACAG CCCGGTACTG CTCGACCACT TCCTCAACTG CGCCATCGAG
ATGGACGTGG ATGCGGTGTG CGACGGCACC GACGTGGTCA TCGGCGCGAT CATGCAGCAC
ATCGAACAGG CCGGCGTTCA CTCCGGTGAC TCGGCGTGCT CGCTGCCTCC TTACTCGCTG
AGCAAGGAAG TGCAGGACGA AGTCCGCGTA CAGGTCAAGA AAATGGCCCT GGAGCTGGGC
GTGGTCGGCC TGATGAACGT GCAGCTGGCC CTGCAGGGCG ACAAGATCTA CGTGATCGAA
GTCAACCCGC GTGCCTCGCG TACCGTGCCG TTCGTGTCCA AGTGCATCGG CACTTCCCTG
GCCATGATCG CCGCCCGCGT CATGGCTGGC AAAACCCTGA AAGAGCTGGG CTTCACCCAG
GAAATCATCC CGAACTTCTA CAGCGTCAAG GAAGCCGTCT TCCCGTTCGC CAAGTTCCCA
GGGGTTGACC CGATCCTCGG CCCTGAGATG AAATCGACCG GTGAAGTCAT GGGTGTCGGT
GACAGCTTCG GTGAAGCCTT CGCCAAGGCT CAGATGGGTG CGAGCGAAGT GCTGCCGACC
GGCGGTACCG CGTTCATCAG CGTGCGTGAC GACGACAAGC CACAAGTGGC AGGCGTTGCT
CGCGACCTGA TCGCCCTGGG CTTCGAAGTG GTTGCAACTG CTGGCACCGC CAAGGTTATC
GAGGCGGCTG GCCTGAAAGT ACGCCGTGTG AACAAGGTGA CCGAAGGTCG CCCGCACGTG
GTCGACATGA TCAAGAACGA CGAAGTGTCG CTGATCATCA ACACCACCGA AGGCCGCCAG
TCGATCGCCG ATTCCTACTC GATTCGTCGC AATGCGCTGC AGCACAAGAT TTACTGCACC
ACGACCATTG CGGCCGGTGA AGCCATCTGC GAAGCGCTGA AGTTTGGTCC GGAAAAGACC
GTTCGTCGCT TGCAAGATCT GCATGCAGGA CTGAAAGCAT GA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GFRVILVNSN PATIMTDPAM
ADATYIEPIK WQSVAKIIEK ERPDAVLPTM GGQTALNCAL DLERHGVLEK FGVEMIGANA
DTIDKAEDRS RFDKAMKDIG LECPRSGIAH SMEEANAVLE KLGFPCIIRP SFTMGGTGGG
IAYNREEFEE ICTRGLDLSP TKELLIDESL IGWKEYEMEV VRDKKDNCII VCSIENFDPM
GVHTGDSITV APAQTLTDKE YQIMRNASLA VLREIGVETG GSNVQFGICP NTGRMVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAIGY TLDELQNDIT GGRTPASFEP SIDYVVTKLP
RFAFEKFPKA DARLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGACGLD PKVDLASPEA
ASILKRELTV PGAERIWYVA DAMRSGMTCE EIFALTGIDM WFLVQMEDLI KEEEKVKTLA
LSAIDKDYML RLKRKGFSDQ RLAVLLGITD KNLRRHRHKL EVFPVYKRVD TCAAEFATDT
AYLYSTYEEE CEANPSTRDK IMILGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPL TLEDVLEVCR VEKPKGVIVH YGGQTPLKLA RALEEAGVPI
IGTSPDAIDR AEDRERFQQM VQRLSLLQPP NATVRSEEEA IRAAGGIGYP LVVRPSYVLG
GRAMEIVYEL DELKRYLREA VQVSNDSPVL LDHFLNCAIE MDVDAVCDGT DVVIGAIMQH
IEQAGVHSGD SACSLPPYSL SKEVQDEVRV QVKKMALELG VVGLMNVQLA LQGDKIYVIE
VNPRASRTVP FVSKCIGTSL AMIAARVMAG KTLKELGFTQ EIIPNFYSVK EAVFPFAKFP
GVDPILGPEM KSTGEVMGVG DSFGEAFAKA QMGASEVLPT GGTAFISVRD DDKPQVAGVA
RDLIALGFEV VATAGTAKVI EAAGLKVRRV NKVTEGRPHV VDMIKNDEVS LIINTTEGRQ
SIADSYSIRR NALQHKIYCT TTIAAGEAIC EALKFGPEKT VRRLQDLHAG LKA
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