| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1726 |
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| Symbol | carB |
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| ID | 8019380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1835222 |
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| End bp | 1838467 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830509 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_002981681 |
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| Protein GI | 241663321 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.746976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT CAAAACCATC CTGATCATCG GCGCGGGTCC GATCATCATC
GGCCAGGCGT GTGAATTCGA TTACTCCGGC GCGCAGGCTT GCAAGGCGCT CCGTGAAGAA
GGCTTCAAGG TGGTCCTGGT CAACAGCAAC CCGGCCACGA TCATGACCGA CCCCAACACG
GCCGACGTGA CCTACATCGA GCCGATCACC TGGGAAGTCG TCGAGCGCAT CATCGCCAAG
GAGCGCCCCG ACGCGATCCT GCCGACGATG GGCGGCCAGA CCGCGCTGAA CTGCGCGCTG
GACCTGCATC GCCACGGCGT GCTGAAGAAG TACAACGTCG AGCTGATCGG CGCATCGCCC
GAGGCCATCG ACAAGGCCGA AGACCGCCAG AAGTTCAAGG ACGCGATGAC CAAGATCGGT
CTCGGGTCGG CCAAGTCGGG CATCGCACAT TCGATGGACG AAGCCGTGGC CGTGCAGTCG
CAGATCGCCA AGGAAACCGG CACGAGCGGC TACCCGATCG TGATCCGTCC GTCGTTCACG
CTGGGCGGCA CGGGCGGCGG CATCGCCTAC AACCGCGAAG AATTCGAAGA GATCTGCAAG
CGCGGTCTCG ACCTCTCGCC GACCAACGAG CTGCTGATCG AAGAGTCGCT GCTCGGCTGG
AAGGAATACG AGATGGAAGT CGTGCGCGAC AGGGCCGACA ACTGCATCAT CGTCTGCTCG
ATCGAGAACC TGGACCCGAT GGGCATCCAC ACCGGTGACT CCATCACTGT GGCCCCGGCG
CAGACCCTGA CCGACAAGGA ATACCAGATC CTGCGTAACG CCTCGCTGGC TGTGTTGCGC
GAGATCGGCG TGGATACCGG CGGCTCGAAC GTGCAGTTCT CGATCAATCC GCAGGATGGC
CGGATGATCG TGATCGAGAT GAACCCGCGT GTGTCGCGTT CGTCGGCGCT GGCGTCGAAG
GCCACCGGTT TCCCGATCGC CAAGGTCGCG GCCAAGCTGG CCGTGGGCTA CACGCTGGAC
GAGCTGAAGA ACGAGATCAC CGGCGGCGCG ACGCCGGCGT CGTTCGAGCC GTCGATCGAC
TACGTGGTCA CCAAGGTGCC GCGTTTCGCG TTCGAGAAAT TCCCGCAGGC CGACAGCCAC
CTGACCACGC AGATGAAGTC GGTCGGTGAG GTGATGGCCA TGGGCCGGAC GTTCCAGGAG
TCGTTCCAGA AGGCGCTGCG TGGCCTGGAA GTCGGCGTGG ACGGCCTGGA CGAAAAGTCC
ACCGACCGCG ACGAGATCAT CGAAGAGATC GGCGAAGCCG GTCCGGATCG GATCTGGTAT
CTGGGCGACG CATTCCGCCT GGGCCTGTCG ATCGACGAGG TTTATGCCGA GACGTCCGTT
GATCCGTGGT TCCTGGCGCA GATCGAAGAC ATCGTCAAGA CGGAAGCATT GGTGAAGTCC
CGCACCCTGG AAAGCCTGTC GGCTGCCGAG CTGCGTCTGC TCAAGCAGAA GGGTTTCTCC
GACCGCCGCC TTGCCAAGCT GACCAAGACG ACAGCCAAGG CAGTGCGCGA AAAGCGTATC
GCCGAGAACG TGCGTCCGGT CTACAAGCGC GTCGACACCT GCGCCGCTGA ATTCGCGACC
AACACGGCCT ACCTGTACTC GACGTACGAA GCCGAGCATG GCGAGTGCGA AGCCGAGCCG
ACGGGCAACA AGAAGATCAT GGTCCTGGGC GGTGGCCCGA ACCGGATCGG CCAGGGTATC
GAGTTCGACT ACTGCTGCGT GCACGCCGCG CTGGCACTGC GCGAAGACGG GTACGAGACC
ATCATGGTCA ACTGCAACCC GGAGACCGTC TCGACCGACT ACGATACGTC TGACCGCCTG
TACTTCGAGC CGGTGACGCT GGAAGACGTG CTGGAAATCG TCGACAAGGA AAAACCGGTT
GGCCTGATCG TGCAATACGG CGGCCAGACA CCGCTGAAGC TCGCGCTGGA TCTAGAAGCC
AACGGCGTGC CCATCATCGG TACGTCGCCG GACATGATCG ACGCCGCCGA AGACCGTGAG
CGTTTCCAGA AGCTGCTGCA CGAGCTGGGC CTGCGCCAGC CGCCCAACCG CACCGCGCGT
GCTGAAGATG AAGCGCTCAA GCTGGCCGAA GAAATCGGCT ACCCGCTGGT GGTGCGTCCG
TCGTATGTGC TGGGCGGCCG CGCGATGGAG ATCGTGCATG AGCCGCGCGA CCTCGAGCGC
TATATGCGCG AGGCCGTGAA GGTGTCGAAC GACAGCCCCG TGCTGCTCGA CCGCTTCCTG
AACGACGCCA TCGAATGCGA CGTGGATTGC CTGTCCGACG GCAAGCGCGT ATTCATCGGC
GGCGTGATGG AGCACATCGA GCAGGCTGGC GTGCACTCGG GCGACTCGGC TTGCTCGCTG
CCGCCGTATT CGCTGTCGCA GGCGACCGTC GACGAACTCA AGCGCCAGAC CGCCGCGATG
GCCAAGGCGC TGAACGTGAT CGGTCTGATG AACGTGCAGT TCGCCATTCA GCAGAAGGGC
GGCGAAGACA TCGTCTATGT GCTGGAAGTG AACCCGCGTG CTTCGCGGAC GGTGCCGTAC
GTTTCGAAGG CGACCGGCGT GCCGTTGGCC AAGGTTGCCG CTCGCTGCAT GGCGGGTCAG
TCGCTGGAGT CGCAAGGCGT CGAGACAGAA GTCGTGCCGG CGTACTACAG CGTCAAGGAA
GCAGTGTTCC CGTTCAACAA GTTCCCGGGC GTCGATCCGG TGCTCGGACC GGAAATGCGC
TCGACTGGCG AAGTCATGGG CGTCGGCAAG ACGTTTGGCG AAGCGCTCTT CAAGAGCCAG
CTCGCCGCCG GTTCGCGCCT GCCCGAGAAG GGCACCGTGC TGATGACCGT CAAGGACAGC
GACAAGCCGC AAGCCGTGGA AGTCGCCCGC GCGCTGCATA CGTTGGGCTA CCCGATCGTG
GCGACGCGTG GCACGGCTTC TGCCATTGAA GCCGCCGGCA TTCCGGTGCG CGTAGTCAAC
AAGGTGAAGG ACGGCCGTCC GCACATTGTC GACATGATCA AGAACAGCGA GATCGCGCTC
GTCTTCACGA CTGTCGATGA GACGCGTGCA GCAATCGCTG ACTCGCGCTC GATCCGGCAG
GCAGCATTGG CGCAGCGCGT CACGTACTAC ACGACCATCG CCGGTGCTCG CGCCGCGGTG
GAAGGTCTGA AGCACATGCA GCACCTGGAT GTGTATGACC TGCAGGGCCT GCACGCCACC
CTGTAA
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| Protein sequence | MPKRTDIKTI LIIGAGPIII GQACEFDYSG AQACKALREE GFKVVLVNSN PATIMTDPNT
ADVTYIEPIT WEVVERIIAK ERPDAILPTM GGQTALNCAL DLHRHGVLKK YNVELIGASP
EAIDKAEDRQ KFKDAMTKIG LGSAKSGIAH SMDEAVAVQS QIAKETGTSG YPIVIRPSFT
LGGTGGGIAY NREEFEEICK RGLDLSPTNE LLIEESLLGW KEYEMEVVRD RADNCIIVCS
IENLDPMGIH TGDSITVAPA QTLTDKEYQI LRNASLAVLR EIGVDTGGSN VQFSINPQDG
RMIVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGA TPASFEPSID
YVVTKVPRFA FEKFPQADSH LTTQMKSVGE VMAMGRTFQE SFQKALRGLE VGVDGLDEKS
TDRDEIIEEI GEAGPDRIWY LGDAFRLGLS IDEVYAETSV DPWFLAQIED IVKTEALVKS
RTLESLSAAE LRLLKQKGFS DRRLAKLTKT TAKAVREKRI AENVRPVYKR VDTCAAEFAT
NTAYLYSTYE AEHGECEAEP TGNKKIMVLG GGPNRIGQGI EFDYCCVHAA LALREDGYET
IMVNCNPETV STDYDTSDRL YFEPVTLEDV LEIVDKEKPV GLIVQYGGQT PLKLALDLEA
NGVPIIGTSP DMIDAAEDRE RFQKLLHELG LRQPPNRTAR AEDEALKLAE EIGYPLVVRP
SYVLGGRAME IVHEPRDLER YMREAVKVSN DSPVLLDRFL NDAIECDVDC LSDGKRVFIG
GVMEHIEQAG VHSGDSACSL PPYSLSQATV DELKRQTAAM AKALNVIGLM NVQFAIQQKG
GEDIVYVLEV NPRASRTVPY VSKATGVPLA KVAARCMAGQ SLESQGVETE VVPAYYSVKE
AVFPFNKFPG VDPVLGPEMR STGEVMGVGK TFGEALFKSQ LAAGSRLPEK GTVLMTVKDS
DKPQAVEVAR ALHTLGYPIV ATRGTASAIE AAGIPVRVVN KVKDGRPHIV DMIKNSEIAL
VFTTVDETRA AIADSRSIRQ AALAQRVTYY TTIAGARAAV EGLKHMQHLD VYDLQGLHAT
L
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