| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3911 |
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| Symbol | carB |
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| ID | 4457766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4761715 |
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| End bp | 4764915 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639704684 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_848015 |
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| Protein GI | 116751328 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.123492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC GCAACGACAT TCAAAAGGTG ATGATCATCG GCTCGGGGCC GATCATCATC
GGCCAGGCCT GTGAATTCGA CTATTCGGGA ACCCAGGCGT GCAAGGCGCT TCGAAAACTG
GGTTATTCCA TTCTGTTGGT CAACTCCAAC CCGGCGACCA TCATGACGGA TCCGGGAATG
GCCGATGTGA CGTACATCGA GCCGCTGACC TTCGAATCGG TGAAAAAGAT CATCGAAAAG
GAACGCCCGG ACGCCATCCT GCCCAATCTC GGCGGTCAGA CCGGGCTGAA CCTCACGGCC
GAGCTTCACC GCAAGGGCGT CCTGGATGCC TGCGGGGTCA AAATCATCGG CGTCCAGGCG
GATGCCATCG AACGCGGGGA AGACCGGATC GCCTTCAAGG AGACCATGAA CCGGCTCAAC
ATTGAAATGC CGAGGAGCGA GCCGGCTCTG TCGGTGAAGG AGGCCGAGGA GATCGCCGCC
CGGCTGGGAT ATCCGGTGGT GATACGGCCG GCCTACACGC TCGGGGGCAC CGGCGGAGGA
CTCGTCTACA ACGTGGAGGA ATTGCGCACC ATTGCCGGCC GGGGCATTTC CGCGAGCCTG
GTGGGACAGG TGCTCGTCGA AGAATCGGTG CTCGGGTGGG AGGAATTGGA GCTCGAAGTG
GTGCGTGACG CCAAGAACCG GCGAATCACC GTGTGTTTCA TTGAAAACGT GGACGCCATG
GGGATTCATA CGGGGGATTC GTTCTGCACC GCCCCCATGC TCACCATCTC CCCTGCTTTG
CAGGAGAAGC TGCAGAAGTA TTCCTATGAC ATTGTCGAAG CCATCGAGGT CATCGGCGGA
ACCAACATCC AGTTCGCGCA CGATCCGAAA ACCGGCCGCG TGGTGGTGAT CGAGATCAAC
CCGAGAACAT CCCGCTCGTC GGCACTCGCC TCCAAGGCGA CCGGTTTCCC CATCGCCATG
ATTTCCTCGA TGCTGGCCGG AGGCCTCACC CTCGATGAAA TCCCCTACTG GCGCGAAGGC
ACCCTGGACA AATACACGCC CTGGGGGGAC TACGTGGTCG TGAAGTTCGC CCGCTGGGCG
TTCGAGAAAT TCAAGGGCGT CGAGGACCGC CTCGGCACGC AGATGCGTGC GGTGGGAGAG
GTGATGAGCC TGGGCAAGAA CTACAAGGAA GCCCTTCAGA AGTCCATCCG CTCCCTGGAA
ATCGGCCGGC ACGGATTCGG TTTTGCCGGG GATTTCCGTG GCAGGCCGCT GGAAGAACTG
ATGGAAGCAC TCTGCACGGC CACCAGCGAA CGCCAGTTCC TCATGTACGA AGCCTTGAGG
AAAGGCGCCG ACGTCGGGGC AATCTACGCC AAGACCCACA TCAAGCCCTG GTTCATCGAA
CAGATGAAGG AACTGGTCGA ACTTGAGGAA ACGATCCTTT CCCACAAGGG GCGCGAGCTG
CCCGATGATC TGCTCGCCCG GGCCAAGCGG GACGGCTTTG CCGACAAGTA CCTGGCGCAA
CTGCTGCAAG TGCCCGAAGC CCGGATCCGC AATCGAAGAA AAGAGCTTGG AATCGTCCAG
GGGTGGCAGG CGGTGCCGGT CAGCGGGGTC GAGAACGCCG CTTACTTCTA TTCGACCTAT
AACGCTCCCG ATGCGGTCGA AACCAGCAGC CGCCGCAAGA TCATGGTCCT CGGGGGAGGT
CCGAACCGGA TCGGCCAGGG AATAGAGTTC GACTACTGCT GCGTGCACGC CGCCTTCGCC
CTCAGAGACG AAGGTTTCGA ATCCATCATG GTGAACTGCA ACCCGGAAAC GGTTTCCACC
GACTACGACA CCTCGGACAA ACTGTATTTC GAACCGGTGA CCGTGGAAGA CGTCCTGTCG
ATCTATGAAA AGGAGAAACC GGAGGGCGTC ATCGTTCAGT TCGGCGGGCA GACCCCGTTG
AACATCGCGC GGGAGCTTTG CGACGAGGGG GTGAACATCC TGGGAACGAC GGTGGACACC
ATCGATCTTG CGGAAGACCG GGATCGATTC CGCGGGATGA TGAAGAAGCT CGGCATACCG
ATGCCGGAAT CGGGCATGGC GAGCACCCTG GAAGAAGCCC TGGAGGTGGC GCGCAAAATC
GGCTACCCGC TCATGGTGAG GCCGTCCTAC GTGCTCGGCG GACGCGGCAT GGAGATCGTC
CATGACGAGG AGATGCTCGA GCGTTACGTG GCGGCGGCGA CGGGCGTCAC CCCCGATCGG
CCCATCCTCA TCGACAAGTT CCTCGAGAAC GCCATCGAGG CCGAGGCGGA CGCCATTTCC
GACGGGACCG ACGCTTTCGT GCCCGCCGTC ATGGAACACA TCGAGCTGGC GGGGATTCAT
TCCGGCGATT CGGCGTGCGT CATTCCACCC ATCAGCATCC CGCCGCGTCA CCTCGAAACC
ATCTATGAAT ACACGCGCAA GATCGCCGTC GAGCTCAACG TGGTCGGCCT CATGAACATT
CAGTACGCCA TTGCGAGGGA CACGGTCTAC GTCTTGGAAG CCAACCCGAG GGCATCCCGC
ACCGTTCCCC TGGTGTCCAA GGTGTGTAAT ATCCCCATGG CCCGCATGGC CACCTGGATC
ATGCTCGGCC GAAAACTCGG CGAGCTTGGC GTCAAGAGCC GGCACATACC GCATTTCGGA
GTCAAGGAAG CGGTGTTTCC CTTCAACATG TTTCCGGAAG TGGATCCCGT GCTCGGGCCG
GAAATGCGCT CAACCGGCGA AGTCCTCGGA ATGGCGGATT CTTTCGGCCT GGCCTACTTC
AAGGCTCAGG AGGCCACACT CCAGGGCCTC CCGCCGACCG GAACGGTGCT CATCACGGTC
GCGGACGAGG ACAAGGAAGC CGCACTGCAG GTGGCCAAGC ATTTCGAAGG GCTTGGATTC
AAGCTCATGA CCACGCGCGG CACCCACAGA TTCATGCGGG AAAACGGCAT CCGGACGGAG
CGCATCGACA AGCTGCACGA GGGACGGCCC AATATCGTGG ATGCCATCAA GAACAAGGAG
ATCCACCTGG TCATCAACAC ACCCGACGGC AAGGTCAGCC TCCACGACGA TTCCTACATC
CGCAAGGCGG CTATCACTTA CAAAGTGCCC TACATCACGA CCATCGCCGC CGCCGTTGCC
GCGGCCAGGG GGATCGAAGC GTTCCGGAAG GGCTGGAAGG CCGCCAAATC ACTCCAGGAA
TACCACGCGG ACATAAAGTG A
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| Protein sequence | MPKRNDIQKV MIIGSGPIII GQACEFDYSG TQACKALRKL GYSILLVNSN PATIMTDPGM
ADVTYIEPLT FESVKKIIEK ERPDAILPNL GGQTGLNLTA ELHRKGVLDA CGVKIIGVQA
DAIERGEDRI AFKETMNRLN IEMPRSEPAL SVKEAEEIAA RLGYPVVIRP AYTLGGTGGG
LVYNVEELRT IAGRGISASL VGQVLVEESV LGWEELELEV VRDAKNRRIT VCFIENVDAM
GIHTGDSFCT APMLTISPAL QEKLQKYSYD IVEAIEVIGG TNIQFAHDPK TGRVVVIEIN
PRTSRSSALA SKATGFPIAM ISSMLAGGLT LDEIPYWREG TLDKYTPWGD YVVVKFARWA
FEKFKGVEDR LGTQMRAVGE VMSLGKNYKE ALQKSIRSLE IGRHGFGFAG DFRGRPLEEL
MEALCTATSE RQFLMYEALR KGADVGAIYA KTHIKPWFIE QMKELVELEE TILSHKGREL
PDDLLARAKR DGFADKYLAQ LLQVPEARIR NRRKELGIVQ GWQAVPVSGV ENAAYFYSTY
NAPDAVETSS RRKIMVLGGG PNRIGQGIEF DYCCVHAAFA LRDEGFESIM VNCNPETVST
DYDTSDKLYF EPVTVEDVLS IYEKEKPEGV IVQFGGQTPL NIARELCDEG VNILGTTVDT
IDLAEDRDRF RGMMKKLGIP MPESGMASTL EEALEVARKI GYPLMVRPSY VLGGRGMEIV
HDEEMLERYV AAATGVTPDR PILIDKFLEN AIEAEADAIS DGTDAFVPAV MEHIELAGIH
SGDSACVIPP ISIPPRHLET IYEYTRKIAV ELNVVGLMNI QYAIARDTVY VLEANPRASR
TVPLVSKVCN IPMARMATWI MLGRKLGELG VKSRHIPHFG VKEAVFPFNM FPEVDPVLGP
EMRSTGEVLG MADSFGLAYF KAQEATLQGL PPTGTVLITV ADEDKEAALQ VAKHFEGLGF
KLMTTRGTHR FMRENGIRTE RIDKLHEGRP NIVDAIKNKE IHLVINTPDG KVSLHDDSYI
RKAAITYKVP YITTIAAAVA AARGIEAFRK GWKAAKSLQE YHADIK
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