Gene Reut_A2175 details

Gene Information

• Locus tag: Reut_A2175
• Symbol: carB
• ID: 3609489
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia eutropha JMP134
• Kingdom: Bacteria
• Replicon accession: NC_007347
• Strand: -
• Start bp: 2398116
• End bp: 2401364
• Gene Length: 3249 bp
• Protein Length: 1082 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637691575
• Product: carbamoyl phosphate synthase large subunit
• Protein accession: YP_296383
• Protein GI: 73541863
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.321083
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAC GCACAGACAT CAAGAGCATC CTGATTATCG GCGCCGGCCC CATCATCATC 
GGCCAGGCGT GCGAGTTCGA CTACTCCGGC GCACAGGCCT GCAAGGCGCT GCGTGAAGAA 
GGTTTCAAGG TCATCCTGGT CAACTCGAAC CCGGCGACCA TCATGACCGA CCCGGCCACG 
GCCGATGTGA CATACATCGA GCCGATCACC TGGGAAGTGG TTGAGCGCAT CATCGAGAAA 
GAGCGTCCTG ACGCGATCCT GCCGACCATG GGCGGCCAGA CCGCGCTGAA CTGCGCGCTG 
GACCTGCATC GCCACGGCGT ACTGGACAAG TACAAGGTCG AACTGATCGG CGCTTCGCCC 
GAAGCTATCG ACAAGGCCGA GGACCGCCAG AAGTTCAAGG ACGCGATGAC CAAGATCGGT 
CTCGGTTCGG CCAAGTCAGG TATCGCGCAC TCGATGGAAG AAGCGCTGGC CGTGCAGACC 
CGCATTGCGC AGGACACCGG CACCAGCGGC TACCCGATCG TGATCCGTCC GTCGTTCACG 
CTGGGCGGCA CGGGCGGTGG CATCGCTTAC AACCGCGAAG AGTTCGAAGA GATCTGCAAG 
CGCGGCCTGG ACCTGTCGCC GACGCGCGAG CTGCTGATCG AAGAATCGCT GCTGGGCTGG 
AAGGAATACG AGATGGAAGT GGTCCGCGAC AAGGCGGACA ACTGCATCAT CATCTGCTCG 
ATCGAGAACC TGGACCCGAT GGGCATCCAC ACCGGTGACT CGATCACCGT GGCCCCGGCC 
CAGACGCTGA CCGACAAGGA ATACCAGATC CTGCGGAACG CCTCGCTGGC CGTGCTGCGC 
GAGATCGGCG TGGACACCGG CGGTTCGAAC GTGCAGTTCT CGATCAATCC GAAGGATGGC 
CGGATGATCG TGATCGAGAT GAACCCGCGT GTGTCGCGTT CGTCGGCACT GGCTTCGAAG 
GCCACGGGCT TCCCCATTGC CAAGGTCGCG GCCAAGCTGG CCGTTGGCTA CACGCTGGAC 
GAGCTCAAGA ACGAAATTAC CGGCGGCGCG ACCCCGGCGT CGTTCGAGCC GTCGATCGAC 
TACGTGGTCA CCAAGGTGCC GCGTTTCGCC TTCGAAAAAT TCCCGCAGGC CGACAGCCAC 
CTGACCACCC AGATGAAGTC GGTCGGTGAA GTGATGGCCA TGGGCCGTAC TTTCCAGGAA 
TCGTTCCAGA AGGCGCTGCG CGGCCTGGAA GTCGGCGTCG ACGGCCTGGA CGAGAAGTCG 
ACCGACCGCG ACGAGATCGT CGAGGAAATC GGCGAGGCTG GCCCGGACCG CATCTGGTAC 
GTGGGCGACG CGTTCCGTAT CGGCATGTCG CTCGAGGAGG TGTACGCCGA GACCGATATC 
GATCCGTGGT TCCTTGCCCA GATCGAGGAC ATCGTCAAGA CGGAAGGCCA GATCAAGGCG 
CGTACGCTGG AAACCCTGTC GGCTGCCGAG CTGCGCTACG TGAAGCAGAA GGGCTTCTCG 
GACCGCCGCC TGGCCAAGCT GCTGAAGACG AAGGCCAAGG CCGTGCGCGA AGCGCGCATC 
GCCAACAACG TGCGTCCGGT CTACAAGCGT GTGGACACCT GCGCGGCCGA GTTTGCGACC 
AACACCGCGT ACATGTATTC GACCTACGAG GCCGAGCATG GCGAGTGCGA AGCGAACCCG 
ACCGACAAGA AGAAGATCAT GGTGCTGGGC GGTGGCCCGA ACCGGATCGG CCAGGGCATC 
GAGTTCGACT ACTGCTGCGT GCACGCCGCG CTGGCGCTGC GCGAAGACGG GTACGAGACC 
ATCATGGTCA ACTGCAACCC GGAAACCGTG TCGACCGACT ATGACACCTC CGACCGCCTG 
TACTTCGAGC CGGTGACGCT GGAAGACGTG CTGGAAATCG TCGCGATCGA GAAGCCGGTC 
GGCGTGATCG TGCAGTACGG CGGCCAGACC CCGCTGAAGC TCGCGCTGGA CCTCGAGCGC 
AACGGCGTGC CCATCATCGG CACCAGCCCG GACATGATCG ACGCCGCGGA AGACCGCGAG 
CGCTTCCAGA AGCTGCTGCA GGACCTGGGC CTGCGCCAGC CGCCCAACCG TACCGCGCGT 
GCCGAAGACG AAGCGCTGCG CCTGGCCGAG GAAATCGGTT ACCCGCTGGT GGTGCGCCCG 
TCGTACGTGC TGGGTGGCCG CGCGATGGAA ATCGTGCACG AGCCGCGTGA CCTCGAGCGC 
TACATGCGCG AGGCCGTCAA GGTGTCGAAC GACTCGCCGG TGCTGCTGGA CCGCTTCCTG 
AACGACGCGA TCGAATGCGA CGTCGACGCG CTGAGCGACG GCAAGCGCGT GTTCATCGGC 
GGCGTGATGG AGCACATCGA GCAGGCTGGC GTGCACTCGG GCGACTCGGC TTGCTCGCTG 
CCGCCGTACT CGCTGTCGGC CGAGACCGTG GCCGAGCTGA AGCGCCAGAC TGCCGCCATG 
GCCAAGGCGC TGAACGTGGT CGGCCTGATG AACGTGCAGT TCGCGATCCA GCAGAACAAC 
GGTGTCGACA CCGTCTACGT GCTGGAAGTG AACCCGCGTG CGTCGCGTAC CGTGCCGTAC 
GTGTCGAAGG CAACCGGCCT GCAGCTGGCC AAGATCGCCG CGCGCTGCAT GGCTGGCCAG 
TCGCTGGACT CGCAGGGTGT CGCCGCCGAG GTGGTGCCGC CGTACTTCAG CGTCAAGGAA 
GCGGTGTTCC CGTTCAACAA GTTCCCGGGC GTGGATCCGG TCCTCGGACC TGAAATGCGT 
TCCACCGGCG AAGTGATGGG CGTGGGCAAG ACCTTCGGCG AAGCGCTGTT CAAGAGCCAG 
CTCGCCGCCG GTTCGCGCCT GCCCGAGAGG GGCACCGTGC TGATCACCGT GAAGGACAGC 
GACAAGGTCC GCGCCGTCGC GGTGGCCCGC ATGCTGCACG ACATGGGCTA CCCGATCGTG 
GCCACGCGCG GCACGGCTTC GGCCATTGAA GCCGCCGGCA TCCCGGTCAA GGTGGTCAAC 
AAGGTCAAGG ACGGCCGTCC GCATATCGTG GACATGATCA AGAACGGCGA ACTGGCGCTG 
GTGTTCACCA CGGTGGACGA GACCCGTGGC GCGATTGCCG ATTCGCGTTC GATCCGTACC 
TCGGCGCTGG CCAACCGCGT GCCGTACTAC ACCACCATTG CCGGCGCGAG CGCCGCGGTG 
GAGGGCCTGA AGCACATGCA AAGCCTGGAG GTCTACGACC TGCAAGGCTT GCATGCGTCG 
CTGGCATAA 

 

Protein sequence

MPKRTDIKSI LIIGAGPIII GQACEFDYSG AQACKALREE GFKVILVNSN PATIMTDPAT 
ADVTYIEPIT WEVVERIIEK ERPDAILPTM GGQTALNCAL DLHRHGVLDK YKVELIGASP 
EAIDKAEDRQ KFKDAMTKIG LGSAKSGIAH SMEEALAVQT RIAQDTGTSG YPIVIRPSFT 
LGGTGGGIAY NREEFEEICK RGLDLSPTRE LLIEESLLGW KEYEMEVVRD KADNCIIICS 
IENLDPMGIH TGDSITVAPA QTLTDKEYQI LRNASLAVLR EIGVDTGGSN VQFSINPKDG 
RMIVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGA TPASFEPSID 
YVVTKVPRFA FEKFPQADSH LTTQMKSVGE VMAMGRTFQE SFQKALRGLE VGVDGLDEKS 
TDRDEIVEEI GEAGPDRIWY VGDAFRIGMS LEEVYAETDI DPWFLAQIED IVKTEGQIKA 
RTLETLSAAE LRYVKQKGFS DRRLAKLLKT KAKAVREARI ANNVRPVYKR VDTCAAEFAT 
NTAYMYSTYE AEHGECEANP TDKKKIMVLG GGPNRIGQGI EFDYCCVHAA LALREDGYET 
IMVNCNPETV STDYDTSDRL YFEPVTLEDV LEIVAIEKPV GVIVQYGGQT PLKLALDLER 
NGVPIIGTSP DMIDAAEDRE RFQKLLQDLG LRQPPNRTAR AEDEALRLAE EIGYPLVVRP 
SYVLGGRAME IVHEPRDLER YMREAVKVSN DSPVLLDRFL NDAIECDVDA LSDGKRVFIG 
GVMEHIEQAG VHSGDSACSL PPYSLSAETV AELKRQTAAM AKALNVVGLM NVQFAIQQNN 
GVDTVYVLEV NPRASRTVPY VSKATGLQLA KIAARCMAGQ SLDSQGVAAE VVPPYFSVKE 
AVFPFNKFPG VDPVLGPEMR STGEVMGVGK TFGEALFKSQ LAAGSRLPER GTVLITVKDS 
DKVRAVAVAR MLHDMGYPIV ATRGTASAIE AAGIPVKVVN KVKDGRPHIV DMIKNGELAL 
VFTTVDETRG AIADSRSIRT SALANRVPYY TTIAGASAAV EGLKHMQSLE VYDLQGLHAS 
LA