| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0977 |
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| Symbol | |
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| ID | 7315008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1055005 |
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| End bp | 1058223 |
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| Gene Length | 3219 bp |
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| Protein Length | 1072 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643615862 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_002513052 |
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| Protein GI | 220934153 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.270817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAGC GTACAGACAT CAACAGCATC CTCATCATCG GCGCCGGCCC GATCATCATC
GGCCAGGCCT GTGAGTTCGA CTACTCCGGC GCCCAGGCCT GCAAGGCGCT GCGCGAGGAG
GGCTACCGGG TCATCCTGGT GAACTCCAAC CCGGCCACCA TCATGACCGA CCCGGAGATG
GCGGACGCCG TCTACATCGA GCCGGTGGAA TGGAAGACCG TGGCGCGCAT CATCGAGCGT
GAGAAGCCGG ATGCCATCCT GCCCACCATG GGCGGACAGA CGGCGCTCAA CTGCGCCCTG
GATCTGGCGA AGCACGGCGT GCTCAAGAAG CACAACGTGG AGCTGATCGG CGCCAGCGAG
GACGCCATCG ACATGGCCGA GGACCGGGAG CGCTTCCGCG ACGCCATGAC CGAGATCGGT
CTCGAGTCGC CCATGGCCTT CGTGGTCAAC ACCTGGGATG AGGCCCAGGA GGTGCAGCCG
AAGATCGGCT TCCCGGTGAT CATCCGCCCG TCCTTCACCA TGGGCGGCAG CGGCGGCGGC
ATCGCCTACA ACCGCGACGA GTACGAGGAG ATCGTCAAGC GCGGCCTGGA CCTCTCGCCC
ACCAACGAGG TGCAGGTGGA GGAGTCCGTG CTGGGCTGGA AGGAATACGA GATGGAGGTG
GTGCGCGACA AGGCGGACAA CTGCATCATC ATCTGCTCCA TCGAGAACCT GGACCCCATG
GGCATCCACA CCGGTGACTC CATTACCGTG GCCCCGGCCC AGACGCTCAC CGACAAGGAA
TACCAGATCA TGCGCAACGC CTCCATCGCG GTGCTGCGCA AGATCGGCGT GGATACCGGC
GGTTCCAACG TGCAGTTCGC CGTGAACCCG GACGACGGCC GCCTGGTGAT CATCGAGATG
AACCCGCGTG TGTCGCGCTC CTCGGCCCTG GCCTCCAAGG CCACCGGCTT CCCCATCGCC
AAGGTGGCGG CCAAGCTGGC CGTGGGCTAC ACCCTGGATG AGCTGCGCAA CGAGATCACC
GGCGGCGTCA CACCCGCGTC CTTCGAGCCG TCCATCGACT ACGTGGTCAC CAAGGTGCCG
CGTTTCACCT TCGAGAAATT CCCCCAGGCC GAGGCCAAGC TCACCACCCA GATGAAGTCG
GTGGGCGAGG TGATGGCCAT CGGGCGCTGC TTCCAGGAGT CCTTCCAGAA GGCCCTGCGG
GGTCTTGAGA CCGGTGCCGA CGGCCTTAAC CCCATGGTGG ATCTGAACGA CCCGGACGCG
GAGATGCTGG TGCGCCAGCA GCTGGTGGCC AACGGTCCGG ATCGCATCTG GTACGTGGGC
GATGCCTTCC GCCTGGGGAT GAGTATTGAG CAGGTCCACG AGCTGACCCG CATCGACCGC
TGGTTCCTGG CCCAGATCAA CGAGCTGATC TTCACCGAAC AGCAACTCCA GGGCCGCAGC
CTCAAGGACC TGGACCGCCT GGCCCTGCTG GATCTCAAGC GCCGGGGCTT CTCAGATCGT
CGCCTGGCCA CCCTGCTGGG CGAGAAGGAG CAGGCGGTGC GCGAGCATCG CCATGGTCTG
AAGGTGCGCC CGGTGTACAA GCGGGTGGAC ACCTGCGCCG CGGAGTTCGC CTCCAACACC
GCCTACATGT ATTCCAGCTA CGACGAGGAG TGCGAGGCCG CACCCTCCAG TCGCGAGAAG
ATCATGGTGC TGGGCGGCGG CCCCAACCGC ATCGGTCAGG GCATCGAGTT CGACTACTGC
TGCGTGCACG CGGCGCTCGC CATGCGCGAG GATGGCTATG AGACCATCAT GGTCAACTGC
AACCCGGAGA CCGTGTCCAC CGACTACGAC ACCTCCGATC GCCTGTACTT CGAGCCCCTG
ACCCTGGAAG ACGTGCTGGA GATCGTGGCG GTCGAGAAGC CCAGGGGCGT GATCGTGCAG
TACGGTGGCC AGACCCCGCT CAAGCTCGCC CGGGATCTCG AGGCCGCCGG CGTGCCCATC
ATCGGCACCA CACCCGACTC CATTGATCTC GCCGAGGACC GGGAGCGCTT CCAGCAGCTC
ATCGACAGGC TGGAACTGGT GCAGCCCCCC AACCGCACCG CACGCAGCGT GGAGGACGCC
ATCAGCAAGG CCGAGGAGAT CGGCTATCCG GTGGTGGTCC GTCCCTCCTA CGTGCTGGGC
GGCCGGGCCA TGGAGATCGT CTACAACGAG GAGGACCTGC GCCGCTACAT GCGCAGCGCC
GTGCAGGTCT CCAACGATGC CCCCGTGCTG CTGGACCGGT TCCTGGATGA CGCCGTGGAG
GTGGACGTGG ATGCCATCTG CGACGGCGAA GAGGTGCTCA TCGGTGGCGT CATGCAGCAC
ATCGAACAGG CCGGCGTGCA TTCCGGCGAC TCCGCCTGCT CCCTGCCGCC GTACTCCCTG
GACAAGAAGA TCCAGGACGA GCTGCGCGAG CAGGTGCGCA AGATGGCCTT CGGCCTCAAG
GTGGTGGGTC TGATGAACAC CCAGTTCGCG GTGCAGGGCG ATAAGGTCTA CGTGCTGGAG
GTCAATCCCC GCGCCTCGCG CACCGTGCCC TTCGTCTCCA AGGCCATCGG CAAGCCCCTG
GCCAAGATCG CCGCCCGCTG CATGGCCGGG CGCAGCCTCA GGGAGCAGGG CGTGGACGGC
GAGGTGATCC CGTCCTACTT CTCCGTGAAG GAAGCGGTGT TTCCGTTCAT CAAGTTCCCC
GGCGTGGACA CCATCCTGGG GCCGGAGATG AAGTCCACCG GCGAGGTTAT GGGTATGGGC
CGCAGCTTCG GCGAGGCCTT CGCCAAGAGC CAGCTGGGCG CGGGCGTGAC CCTGCCCCAG
CGCGGCAAGG CCTTCGTCAG CGTGCGCGAG GCGGACAAGG GCGGTGTGGC CAAGGTGGGC
CGTGCGCTGG TGGAGCAGGG CTTCGAGGTC ATCGCCACCC GCGGCACCGC CGAGGTCCTC
AAGGCGGCGG GCATCGAATG CACGCCAGTC AACAAGGTCA CCGAGGGCCG CCCGCACATC
GTGGACATGA TCAAGAACGA CGAGATCAGC CTGATCGTGA ACACCACCGA GGGCCGGCAG
GCCATCGCGG ATTCATTCAC CATCCGCCGC GAGGCCCTGC AGCACAAGGT CAGCTACACC
ACGACCCTGG CCGGCGCGCT GGCCACGGTG TCGGCCTTGA GCTACCTGGC CCACGAGGAA
GTCTACAGAT TGCAGGACAT GCATCAGGAG AATCGGTAA
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| Protein sequence | MPKRTDINSI LIIGAGPIII GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADAVYIEPVE WKTVARIIER EKPDAILPTM GGQTALNCAL DLAKHGVLKK HNVELIGASE
DAIDMAEDRE RFRDAMTEIG LESPMAFVVN TWDEAQEVQP KIGFPVIIRP SFTMGGSGGG
IAYNRDEYEE IVKRGLDLSP TNEVQVEESV LGWKEYEMEV VRDKADNCII ICSIENLDPM
GIHTGDSITV APAQTLTDKE YQIMRNASIA VLRKIGVDTG GSNVQFAVNP DDGRLVIIEM
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELRNEIT GGVTPASFEP SIDYVVTKVP
RFTFEKFPQA EAKLTTQMKS VGEVMAIGRC FQESFQKALR GLETGADGLN PMVDLNDPDA
EMLVRQQLVA NGPDRIWYVG DAFRLGMSIE QVHELTRIDR WFLAQINELI FTEQQLQGRS
LKDLDRLALL DLKRRGFSDR RLATLLGEKE QAVREHRHGL KVRPVYKRVD TCAAEFASNT
AYMYSSYDEE CEAAPSSREK IMVLGGGPNR IGQGIEFDYC CVHAALAMRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPL TLEDVLEIVA VEKPRGVIVQ YGGQTPLKLA RDLEAAGVPI
IGTTPDSIDL AEDRERFQQL IDRLELVQPP NRTARSVEDA ISKAEEIGYP VVVRPSYVLG
GRAMEIVYNE EDLRRYMRSA VQVSNDAPVL LDRFLDDAVE VDVDAICDGE EVLIGGVMQH
IEQAGVHSGD SACSLPPYSL DKKIQDELRE QVRKMAFGLK VVGLMNTQFA VQGDKVYVLE
VNPRASRTVP FVSKAIGKPL AKIAARCMAG RSLREQGVDG EVIPSYFSVK EAVFPFIKFP
GVDTILGPEM KSTGEVMGMG RSFGEAFAKS QLGAGVTLPQ RGKAFVSVRE ADKGGVAKVG
RALVEQGFEV IATRGTAEVL KAAGIECTPV NKVTEGRPHI VDMIKNDEIS LIVNTTEGRQ
AIADSFTIRR EALQHKVSYT TTLAGALATV SALSYLAHEE VYRLQDMHQE NR
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