Gene lpp2678 details

Gene Information

• Locus tag: lpp2678
• Symbol: carB
• ID: 3117316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 3051723
• End bp: 3054926
• Gene Length: 3204 bp
• Protein Length: 1067 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637581375
• Product: carbamoyl-phosphate synthase large subunit
• Protein accession: YP_124983
• Protein GI: 54298614
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAC GAACCGATAT AAAATCTATT CTAATTCTTG GAGCAGGCCC TATTGTGATT 
GGGCAGGCTT GCGAGTTTGA TTACTCAGGT ACCCAAGCAG TCCGCGCTTT GAAAGAAGAA 
GGATATCGAG TGATATTAGT TAACTCTAAT CCAGCAACCA TAATGACTGA TCCAGAGCTT 
GCTGATGCAA CCTATATAGA GCCTGTTCAA TGGAAAGAAG TGGCTCGTAT TATCGAGATA 
GAGAGGCCAG ACGCTCTTTT ACCGACGATG GGAGGACAAA CAGCTTTAAA CTGCGCCCTG 
GATTTGGTAA GAGAAGGGGT ATTAGCCAAG TACTCTGTTG AAATGATAGG AGCGACGCGT 
GAAGCGATAG ACAGGGCGGA AGATAGAGAA AAATTTCGCC AGCTGATGAT TAAAATCGGA 
TTGGATATGC CAAGGTCAGC GATTGCTCAT AGCCTGGAAG AGGCAATTCA AGTGCAAGCT 
CGTTTAGGCT TTCCTGCCAT CATCAGGCCT TCATTTACCA TGGGTGGTAG TGGAGGCGGT 
ATAGCCTATA ACCGTGAAGA ATTTGAAGAA ATTTGCATTA GAGGATTGGA GTTATCACCA 
ACTCGCGAGC TTTTGATTGA TGAATCGGTT CTGGGTTGGA AAGAATATGA AATGGAAGTC 
GTCCGGGACA AAAATGATAA TTGCATTATT GTTTGTACTA TAGAAAATTT TGACCCTATG 
GGTGTGCATA CTGGAGATTC CATTACCGTT GCTCCGGCGC AAACATTAAC TGATAAAGAA 
TACCAACGGA TGCGGGATGC GGCGATTAAA GTGCTAAGGG CAGTTGGTGT GGATACGGGA 
GGTTCCAACG TTCAGTTTGC TATTAATCCT GAAGACGGGC GCATGCTGGT TGTGGAAATG 
AATCCGCGTG TATCTCGCAG CTCGGCTTTG GCGTCAAAAG CAACCGGTTT TCCCATTGCT 
AAGGTCGCAG CCAAATTGGC TGTGGGTTAT ACCTTGGATG AATTGAAAAA CGAAATCACC 
GGAGGTAAAA CACCTGCGTC CTTTGAACCC AGCATTGATT ACGTTGTTAC CAAAGTTCCA 
CGGTTTAATT TTGATAAATT TCCGCAAACT CCAGACACTC TTACCACACA AATGAAATCA 
GTCGGGGAAG TCATGGCGAT TGGTTCTAAC TTTCAGGAAT CTTTACAGAA AGCCATAAGA 
GGTTTAGAGA TTGGACGCTG TGGATTGCAT TCGCTGTTTC AAAAAGAGGA TATGGCGCGT 
TTAAGAGGAC ATTTACGAGA ACCCACTCCG GACAGACTTT GGTATATTGC TGATGCCTTT 
AGGCAAAATT TATCACTTGA GGAAATTCAT CTGGAAAGTC GAGTCGATCC ATGGTTTCTG 
GCACAAATTC AAGAGTTGGT TCTTTTAGAG CGTTCAATCA TTGGAAAAAC GATTCGGGAT 
CTGGATAAAA CCACTTTACA CCTGATGAAG CACCGGGGTT TTGCTGACGC GTACTTGGCC 
AAATTGCTTG GTTGTACGGA AGCAGAAGTT CGGGCAAGAC GTGTTGAGTT AGAGATCTTG 
CCCGTCTACA AGAGAATTGA TTCTTGTGCC GGAGAATTCC CTAGTGATAC AGCCTACATG 
TATTCTTGTT ATGAAGGAAG CTGTGAAGCA CGTCCTGAGA GCAATAAGAA AAAGATTATG 
ATTCTTGGAG GTGGACCTAA TCGAATTGGC CAAGGCATTG AATTTGATTA TTGCTGCGTG 
CATGCGGCCT TGTCATTAAG GAGTGCGGGT TACCAAACTA TTATGGTGAA TTGCAATCCA 
GAAACGGTTT CCACTGATTT TGATACCTCC GATCGACTAT ATTTTGAACC TGTTACTTTA 
GAGGATGTGT TGTCCATCGT CGCAATGGAA CAACCGGAGG GTGTCATTGT GCATTATGGG 
GGACAAACAC CATTAAAGTT GGCTCGTGAT TTAGAGGCTA ATGGCGTAAA AATAATTGGT 
ACTTCATCAG ATGCTATTGA CATGGCTGAA GACAGAGAAC GATTTCAGCA AATGGTCAAA 
GAATTGAAAC TGCATCAGCC TGATAATGGA ACTGTCCGAA GCGAAGCAGA GGCCATTGAA 
TTAGCTAACA AAATTGGTTA TCCGCTAGTT GTCAGGCCTT CTTATGTTCT CGGTGGACGA 
GCTATGGAAA TTGTTTATCA AGAAGAGGAT TTAAGGTATT ACCTGTCGCA TGCAGTTGAA 
GTTTCTAATG ATTCACCCGT TCTGCTTGAT AAATTTTTGA ATGATGCCAT AGAGGTAGAT 
ATTGATGCCG TTTGTGATGG CAAAGACGTA TTAATTGGTG CCATCATGGA GCATATCGAG 
CAAGCGGGGA TACATTCTGG TGATTCGGCA TGCACTTTAC CTCCTTTTAG CTTGGGCGTA 
GTTGTTCAGC AGGATTTGAT AGAGCAGATC CGAAAAATGG CTTTGAAATT AGGCGTGGTG 
GGCTTGATTA ATGCGCAGTT TGCTATTCAA GCGGATGATA TTTATGTTTT GGAAGTGAAT 
CCGCGCGCTT CGAGAACCGT GCCTTTTGTT TCAAAGGCTA CCGGTCTGCC ATTAGCTAAA 
ATAGCGGCTC TTTGTAAAGT AGGAATTAGC TTGAAAGATC AAGGATTAAA CCAAAATCAT 
CATGCGCCTT CTTTCTATTC GATTAAGTTG CCGGTTTTTC CCTTTATCAA GTTTTCTGGT 
GTGGATTCAA TTCTTGGCCC GGAAATGAAA TCAACGGGGG AAGTGATGGG TATTGCCAAG 
CGTTTTGGAC AAGCTTATGC TAAAGCACAA TTGGGCGCCG GATGTCACAT TGCCAAACGG 
CGACGAGCTT TCGTATCCGT ACGTGACGCA GATAAAACGC GTGTCGGCGA GATTGCCAAG 
AGATTAATAG AACTGGGTTT TGAAATTATC GCCACGCGCG GTACTGCTTT GGCATTACAA 
GCAGCCGGCG TAGACTGCAG AAGAGTCTTT AAAGTAGCAG AAGGCCGACC ACATGTGCTG 
GATTTTATAA AAAATAATGA AATAGACTTT ATTGTAAATA CTACTGAGGG CAAACAAGCG 
ATAGCAGATT CTTTTGCTAT CAGACGCAAC GCCTTACAGC ATAAGGTCAG CTACACTACG 
ACCTTATCAG GAGCCGAAGC TGCTTGTTTG GCTATGAAGT ATGAAGATAG GGAAACTGTA 
ACTCGCTTAC AAGATTTACA TTAG 

 

Protein sequence

MPKRTDIKSI LILGAGPIVI GQACEFDYSG TQAVRALKEE GYRVILVNSN PATIMTDPEL 
ADATYIEPVQ WKEVARIIEI ERPDALLPTM GGQTALNCAL DLVREGVLAK YSVEMIGATR 
EAIDRAEDRE KFRQLMIKIG LDMPRSAIAH SLEEAIQVQA RLGFPAIIRP SFTMGGSGGG 
IAYNREEFEE ICIRGLELSP TRELLIDESV LGWKEYEMEV VRDKNDNCII VCTIENFDPM 
GVHTGDSITV APAQTLTDKE YQRMRDAAIK VLRAVGVDTG GSNVQFAINP EDGRMLVVEM 
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELKNEIT GGKTPASFEP SIDYVVTKVP 
RFNFDKFPQT PDTLTTQMKS VGEVMAIGSN FQESLQKAIR GLEIGRCGLH SLFQKEDMAR 
LRGHLREPTP DRLWYIADAF RQNLSLEEIH LESRVDPWFL AQIQELVLLE RSIIGKTIRD 
LDKTTLHLMK HRGFADAYLA KLLGCTEAEV RARRVELEIL PVYKRIDSCA GEFPSDTAYM 
YSCYEGSCEA RPESNKKKIM ILGGGPNRIG QGIEFDYCCV HAALSLRSAG YQTIMVNCNP 
ETVSTDFDTS DRLYFEPVTL EDVLSIVAME QPEGVIVHYG GQTPLKLARD LEANGVKIIG 
TSSDAIDMAE DRERFQQMVK ELKLHQPDNG TVRSEAEAIE LANKIGYPLV VRPSYVLGGR 
AMEIVYQEED LRYYLSHAVE VSNDSPVLLD KFLNDAIEVD IDAVCDGKDV LIGAIMEHIE 
QAGIHSGDSA CTLPPFSLGV VVQQDLIEQI RKMALKLGVV GLINAQFAIQ ADDIYVLEVN 
PRASRTVPFV SKATGLPLAK IAALCKVGIS LKDQGLNQNH HAPSFYSIKL PVFPFIKFSG 
VDSILGPEMK STGEVMGIAK RFGQAYAKAQ LGAGCHIAKR RRAFVSVRDA DKTRVGEIAK 
RLIELGFEII ATRGTALALQ AAGVDCRRVF KVAEGRPHVL DFIKNNEIDF IVNTTEGKQA 
IADSFAIRRN ALQHKVSYTT TLSGAEAACL AMKYEDRETV TRLQDLH