| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0833 |
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| Symbol | |
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| ID | 5206167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 987231 |
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| End bp | 990491 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599054 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001279735 |
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| Protein GI | 148652642 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00324716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACTGATAT TAAAAGCATC CTAATTATTG GCGCCGGCCC TATCGTTATC
GGTCAAGCTT GTGAGTTTGA CTACTCAGGC GCACAAGCTT GTAAAGCACT TCGCGAGGAG
GGCTACCGCG TTATCTTAGT CAACTCAAAC CCCGCCACCA TCATGACTGA CCCTGTGATG
GCTGATGCCA CCTATATTGA ACCGATTACC TGGCAAACGG TTGAGCAAAT TATTGATAAA
GAACGTCCAG ACGCTATCTT GCCGACCATG GGTGGTCAGA CGGCACTTAA CTGTGCACTA
GATTTGGATA GAAACGGCGT CTTAGAAAAA TACAACGTTG AGCTCATCGG GGCAACCAAA
GATGCCATCG AGATGGCTGA AGACCGCGAA CTGTTTGACC AAGCCATGAA GCGTATTGGC
CTTGAATGTC CACGCGCCGA AACTGCTGAG AGCATGGAAG AGGCCTTTGA AATCCAAGCC
AAACTTGGCT TCCCATGTAT CATCCGTCCC TCCTTTACCA TGGGCGGCTC AGGTGGCGGT
ATCGCTTATA ACCGTGATGA ATTTATCGAG ATTTGTGAGC GTGGCTTTGA CCTATCGCCC
ACCCATCAGC TGTTAATCGA TGAATCATTA ATCGGCTGGA AAGAATATGA GATGGAAGTG
GTACGCGACA AAAATGATAA CTGTATCATT ATCTGTGCCA TTGAGAACGT CGACCCAATG
GGCGTGCACA CCGGCGACTC AATCACTGTT GCGCCTGCTC AAACGCTTAC CGACAAAGAA
TACCAAATCA TGCGTAACGC GTCACTGGCC GTACTGCGTG AGATTGGTGT GGAAACCGGC
GGCTCTAACG TTCAGTTTGG GGTGAACCCA AAAACCGGCC GTATGGTGGT GATTGAGATG
AACCCTCGTG TATCTCGCTC ATCAGCTCTG GCCTCAAAAG CAACCGGCTT CCCAATTGCT
AAAATCGCTG CCAAACTGGC CGTGGGTTAT ACACTTGATG AGCTGCAAAA CGACATCACT
GGCGGTAAAA CACCAGCCAG CTTTGAGCCA TCTATTGACT ATGTTGTCAC CAAGATTCCA
CGCTTTAACT TCGAAAAATT CCCACAAGCA GAAAACATCT TATCAACCCA GATGAAGTCT
GTGGGTGAAG TCATGGCTAT CGGCCGTAAC TTCCAAGAGT CGATGCACAA AGCGCTGCGT
GGCCTTGAGA CGGGTGCTGA TGGTTTTGAT GAGCAAATCG ACTTTGCTGC TCTAAAAGCC
GGCAAAATCA GCGAGGACAA AGTAAAGGCT GAGATTAAAA ACCGTTTAAC CGTCCCTACT
CCTGAGCGTA TCTTCTATAT CGCAGATGCC TTCCGCTTAG GTATGAGTGT TGATGAGGTA
TTTAAACTGA CCAATATCGA CCCTTGGTTC TTGGTTCAAA TTGAAGACAT TGTAAAAACC
GAAGAGCAGG TTAAGCTGCT AGGCTTCGGT GGTCTTAATG CCGCAAATCT ACGCAAGTTT
AAGCGCAAAG GCCTATCTGA TTTACGCTTG GCCAAACTGC TCGGCGTATC TCAAAAGCAG
CTGCGCAAAA AGCGCTGGGA CTTACAGGTC TATCCGGTTT ATAAGCGTGT GGATACTTGT
GCCGCTGAAT TTGCCACCTC TACCGCTTAT ATGTACTCAA CCTATGATGA AGAGTGCGAG
GCGAACCCAA CCGATAACAA AAAAATCATG GTTATTGGCG GTGGCCCAAA CCGTATTGGT
CAAGGTATTG AGTTTGATTA CTGCTGTGTG CACGCTGCTC TTGCCATGCG TGAAGACGGC
TATGAGACCA TCATGGTGAA CTGTAACCCA GAAACAGTTT CAACCGACTA TGACACCTCA
GACCGCTTGT ACTTTGAGTC GATCACCCTA GAGGATGTGC TAGAAATCGT CCGTATCGAA
AAACCTGAAG GGGTTATCGT GCAATTCGGT GGTCAAACAC CACTTAAATT AGCTCGTGCC
TTAGAAGCTG CAGGCGTGAA CATCATTGGT ACCTCTCCTG ATGCCATTGA CCGCGCTGAA
GACCGTGAGC GCTTCCAGCA CATGATTCAG CAGCTAAATC TGATTCAGCC ACCAAACGCC
CTAGCCACCA GCATGGAAGA TGGCTTAATG AAGGCCAGCA GCGTCGGCTA CCCGCTGGTA
GTACGTCCCT CTTATGTGCT CGGCGGCCGT GCCATGGAAA TTGTCTACAA CGAAGAAGAG
CTTAAGCACT ATTTGCGCAC AGCGGTACAA GCTTCTAATG AAGCACCAGT ACTGTTAGAT
CGCTTCTTAG ATGACGCCAT TGAGGTGGAC GTAGACTGTG TTAGTGACGG CAATGAAGTG
GTTATCGGCG GTATCATGCA GCACATCGAA CAAGCGGGTG TTCACTCAGG CGACTCAGCC
TGCTCATTAC CGCCTTACTC GCTATCAGAT GAGATTTGTG ATGAGATGCG CGCTCAAACC
GTGGCCATGG CCAAAGAGCT TGGCGTGGTA GGCTTAATGA ACGTACAGTT TGCGGTAAAA
GATGGCACGG TTTACATTCT TGAGGTGAAC CCTCGCGCCG CACGTACTGT ACCTTTTGTC
TCTAAATGCA TTGGCAAGTC ACTGGCTCAA GTGGCGGCTC GCTGTATGGC TGGTACCTCA
CTACAGGATC AAAAATTCAC CCAAGAAATT AAGCCCACTT TCTTTGCAGT GAAAGAGTCG
GTCTTCCCAT TCGCTAAATT CCCAGGTGTG GACCCTATCT TAAGCCCTGA AATGAAGTCA
ACCGGTGAAG TGATGGGCGT TGGCAAAACC TTCGGTGAAG CTTTCTATAA AGGCATTATC
GGCTCTAATG AGCGTCTACC AGGCCTACCA AAACAGGGTG AGACCAAGAC GGTATTCATC
TCAGTGCGTG ATAGCGACAA GCCTAACATT GCACCTATCG CCAAACAGCT CATTGATTTT
GGCTTTAAAT TGGTGGCCAC CGCAGGTACT GAGCAGTATC TCACCGAGCA AGGCATCGAG
TGCAAACGCA TTAATAAAGT GACTGAAGGT CGTCCTCATG TCGTTGATGC CTTGAAAAAT
GGTGAAATCG ACCTTATTAT CAATACAACC GAAGGTAAGC AAGCGCAAGA GGACTCGTTC
TCAATTCGCC GCAATGCCCT TCAAAGCAAG GTGTTCTATG TCACCACTTT AGGCGCAGCC
GATGCGGTAT GTAAGTCTTA TGCCATCGAC TTGCCTTTTG ATGTCTATAA ATTACAAGCG
TTACACGAAG CCGCACTTTA G
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| Protein sequence | MPKRTDIKSI LIIGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPVM
ADATYIEPIT WQTVEQIIDK ERPDAILPTM GGQTALNCAL DLDRNGVLEK YNVELIGATK
DAIEMAEDRE LFDQAMKRIG LECPRAETAE SMEEAFEIQA KLGFPCIIRP SFTMGGSGGG
IAYNRDEFIE ICERGFDLSP THQLLIDESL IGWKEYEMEV VRDKNDNCII ICAIENVDPM
GVHTGDSITV APAQTLTDKE YQIMRNASLA VLREIGVETG GSNVQFGVNP KTGRMVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELQNDIT GGKTPASFEP SIDYVVTKIP
RFNFEKFPQA ENILSTQMKS VGEVMAIGRN FQESMHKALR GLETGADGFD EQIDFAALKA
GKISEDKVKA EIKNRLTVPT PERIFYIADA FRLGMSVDEV FKLTNIDPWF LVQIEDIVKT
EEQVKLLGFG GLNAANLRKF KRKGLSDLRL AKLLGVSQKQ LRKKRWDLQV YPVYKRVDTC
AAEFATSTAY MYSTYDEECE ANPTDNKKIM VIGGGPNRIG QGIEFDYCCV HAALAMREDG
YETIMVNCNP ETVSTDYDTS DRLYFESITL EDVLEIVRIE KPEGVIVQFG GQTPLKLARA
LEAAGVNIIG TSPDAIDRAE DRERFQHMIQ QLNLIQPPNA LATSMEDGLM KASSVGYPLV
VRPSYVLGGR AMEIVYNEEE LKHYLRTAVQ ASNEAPVLLD RFLDDAIEVD VDCVSDGNEV
VIGGIMQHIE QAGVHSGDSA CSLPPYSLSD EICDEMRAQT VAMAKELGVV GLMNVQFAVK
DGTVYILEVN PRAARTVPFV SKCIGKSLAQ VAARCMAGTS LQDQKFTQEI KPTFFAVKES
VFPFAKFPGV DPILSPEMKS TGEVMGVGKT FGEAFYKGII GSNERLPGLP KQGETKTVFI
SVRDSDKPNI APIAKQLIDF GFKLVATAGT EQYLTEQGIE CKRINKVTEG RPHVVDALKN
GEIDLIINTT EGKQAQEDSF SIRRNALQSK VFYVTTLGAA DAVCKSYAID LPFDVYKLQA
LHEAAL
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