Gene Pcar_1612 details

Gene Information

• Locus tag: Pcar_1612
• Symbol: carB
• ID: 3724312
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter carbinolicus DSM 2380
• Kingdom: Bacteria
• Replicon accession: NC_007498
• Strand: -
• Start bp: 1882710
• End bp: 1885964
• Gene Length: 3255 bp
• Protein Length: 1084 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637751207
• Product: carbamoyl-phosphate synthase large subunit
• Protein accession: YP_357026
• Protein GI: 77919211
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000225246
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAAAA GAACAGATAT TCAGAAAATT CTGATTATTG GCGCCGGGCC CATTATTATC 
GGCCAGGCCT GCGAATTCGA TTATTCCGGA ACCCAGGCCT GCAAGGCTCT CAAAGAAGAG 
GGATACACCG TTATCCTTTT GAATTCGAAC CCGGCCACCA TCATGACCGA CCCGGAAACA 
GCGGATCGGA CCTATGTGGA GCCGGTTACA CCGGAAGTCC TCGAGAAAAT CATTGAAGCA 
GAGCGTCCCG ACGCCATTTT ACCCACTCTC GGTGGCCAGA CCGCATTGAA TACCGCCGTC 
GCCGCGGCCC AAAACGGTGT ACTCGAACGC TACGGCGTGG AATTGATCGG TGCCAGTCTG 
CCGGCTATTG AAAAAGCCGA GGACCGCACC CTGTTTAAAG AAGCCATGGC CAAAATAGGC 
GTAGCCGTAC CCCGATCCGG CCTCGCCCAC AGTTATGAAG AAGCGATGAA GATCATCGAG 
TATGTCGGCT ATCCGGCCAT TATTCGTCCT TCTTTTACCT TGGGCGGAAC GGGCGGCGGT 
ATCGCATACA ACCGTGAAGA ATATGAAGCG CTGGCACTCG GCGGCATCGA TGCTTCTCCC 
ACCGATGAGA TTCTGGTGGA AGAGTCGATC ATCGGTTGGA AAGAATTCGA GCTTGAGGTC 
ATGCGCGACA AGGCCGACAA TGTCGTCATC ATCTGCTCCA TCGAAAACTT CGATGCCATG 
GGCGTTCATA CCGGCGACTC CATCACCGTG GCGCCGGCGC AGACCCTGTC CGACAAGGAA 
TACCAGCTTT TGCGCGATGC CTCCATCAAG ATCATCCGCG AAATCGGGGT CGACACCGGC 
GGTTCCAATA TTCAGTTCGC CATCAACCCC GTCGACGGAC GCCTGGCGGT CATCGAGATG 
AACCCCCGGG TATCGCGGTC GTCGGCCCTG GCATCCAAGG CAACGGGTTT TCCCATTGCT 
AAAATTGCCG CAAAATTATC CGTGGGTTAC ACCCTGGATG AGATTCCCAA CGATATTACC 
CAGGAAACTT TTGCTTCCTT CGAACCGACC ATCGATTATG TGGTCACCAA GATTCCGCGT 
TTTACTTTCG AGAAATTTCC CCAGGCCGAC AGCACACTGA CCACCCAGAT GAAGTCGGTG 
GGAGAGGCCA TGTCCATCGG CAGGACGTTT AAAGAAAGCC TCCAAAAGGG TCTGCGTTCC 
ATGGAAATCG GATCCTACGG GTTCGAAAGT CGCCTCTACA ACTCTCCTGC AGAGTGGGGT 
TCTCCCCTGG ATGATGCCGC CCGGGAACTG CTCAATACCA AGCTGCATGT ACCGAACTGG 
GAGCGTATCT GGTATGTCGC CGACGCATTC CGCGCCGGTA TGGATATTCC GCAGATTTAT 
ACCGCCACCG GTATCGATCC CTGGTTCCTC TTTCAGATCC AGCAGATCAT TGAGATGGAA 
GAGCAACTGG TCAAATTGGT CGAATTGCCC GCTACCGCCA CCGAATGGCC TGAATTGTTG 
CGCGAAGCCA AGCAAAACGG ATTTTCCGAT CGGCGTCTGG CGCAACTTTG GGGCAAAACG 
GAGGACGAGG TACGTCAACT GCGCCTTGAC ATGAACATTC ATCCCGTTTA CAAGCGCGTT 
GACACCTGCG GTGCCGAATT CATAGCCCAT ACGCCGTATC TTTATTCGAC TTATGAAACC 
GAATGCGAAG CGATGCCGAC TGACCGCAAA AAGATCATGA TTCTCGGCGG CGGGCCCAAT 
CGAATCGGTC AAGGCATCGA GTTCGATTAC TGTTGCGTTC ACGGCGTTAT GGCCTTGGCT 
GAGGATGGTT ACGAAACCAT CATGGTCAAT TGCAACCCTG AAACCGTTTC CACCGACTAC 
GATACATCCG ACCGACTTTA TTTCGAACCT TTGACTTTTG AGGATGTCCT CGAGATCGTC 
CATATTGAAA AGCCTGTGGG CGTCATTGTG CAGTTCGGCG GTCAGACTCC TTTGAAACTG 
GCCGTGTCGC TGGAAAAAGC CGGCGTCCCC ATCATCGGCA CTTCACCCGA TGCTATCGAC 
CGCGCCGAGG ACCGCGAGCG CTTTCAGGCA CTGTTATTCA AGCTCAACCT GTTGCAACCC 
GACAATGGTC TGGCACGCTC CTTCGACGAA GCTGAGAAGA TCGCTGAACG TATCGGTTAT 
CCGGTCGTTG TGCGTCCTTC CTACGTTCTC GGCGGTCGCG CCATGGAAAT CGTCTACCAT 
GTCGATGCCT TGCGCAATTA TATGCAAAAT GCCGTGCAGG CCTCCCCGGA TCATCCGATT 
CTGATCGATA AATTTCTCGA ACATGCCATC GAAGTCGATG TCGATGCTCT GTGCGACGGA 
AAAAGCGTCG TTATCGGCGG TATCATGCAG CACATCGAAG AGGCCGGCAT TCACTCCGGC 
GACTCGGCAT GCGCATTGCC TCCGTTCTCT CTGAAACCCG AGATTGTCGA TGAAATCCGC 
CGTCAGACCC GGGAGCTTGC CTTGGAGCTC GGTGTCGTCG GCTTGATGAA CATTCAATAC 
GCTGTCAAGG AAGACACCAT TTATCTGCTC GAAGTCAATC CGCGCGCCAG TCGCACGGTG 
CCGTTTGTAT CCAAGGCGAC CAATCGACCA CTGGCCAAAC TGGCTGCACG GGTCATGGCA 
GGAAAAACTC TGGAAGATCT CCAGGTCCAC GATGAGATCA TTCCGTCCTA CATCTCGGTC 
AAGGAAGCCG TCTTCCCCTT TGTCAAGTTC CCCGGGGTCG ATACGCTGCT CGGTCCCGAA 
ATGAAATCGA CCGGTGAGGT CATGGGAATC GACACCAACC TGTATCGGGC CTTTGCCAAG 
GCTCAGCTGG CGGCCGGAGT GATTCTGCCT GTCAAAGGCA AGGTCTTTAT CAGCCTCAAG 
GATGGCGACA AGCAAACCTT CCTTGAGCCG GCACGGCGCC TGGTTGAGGG TGGTTTTTCC 
CTGGTTGCAA CCCGTGGAAC AGCTTCTTTC CTCGAGGCCA ACGGGCTTCC GGTAACCGCC 
ATCAACAAGG TTAAAGAAGG TCGCCCGCAT TGTGTTGATG CACTGAAAAG CAAAGAAATC 
GACATGGTAT TCAACACCAC TTTCGGGCCG CAATCCGTAT CCGATTCCTA TTCCATCCGG 
CGTACGGCCC TGATGTACAA CATTGCCTAC TATACAACCC TCGAAGGCAT CATTGCCGCC 
GTGGATGCCG TACTGTCTCT GGGACGAGAA AAGCTTGACG TTGTTCCTCT CCAGGAGTAT 
TATTCAGGGC AATAG 

 

Protein sequence

MPKRTDIQKI LIIGAGPIII GQACEFDYSG TQACKALKEE GYTVILLNSN PATIMTDPET 
ADRTYVEPVT PEVLEKIIEA ERPDAILPTL GGQTALNTAV AAAQNGVLER YGVELIGASL 
PAIEKAEDRT LFKEAMAKIG VAVPRSGLAH SYEEAMKIIE YVGYPAIIRP SFTLGGTGGG 
IAYNREEYEA LALGGIDASP TDEILVEESI IGWKEFELEV MRDKADNVVI ICSIENFDAM 
GVHTGDSITV APAQTLSDKE YQLLRDASIK IIREIGVDTG GSNIQFAINP VDGRLAVIEM 
NPRVSRSSAL ASKATGFPIA KIAAKLSVGY TLDEIPNDIT QETFASFEPT IDYVVTKIPR 
FTFEKFPQAD STLTTQMKSV GEAMSIGRTF KESLQKGLRS MEIGSYGFES RLYNSPAEWG 
SPLDDAAREL LNTKLHVPNW ERIWYVADAF RAGMDIPQIY TATGIDPWFL FQIQQIIEME 
EQLVKLVELP ATATEWPELL REAKQNGFSD RRLAQLWGKT EDEVRQLRLD MNIHPVYKRV 
DTCGAEFIAH TPYLYSTYET ECEAMPTDRK KIMILGGGPN RIGQGIEFDY CCVHGVMALA 
EDGYETIMVN CNPETVSTDY DTSDRLYFEP LTFEDVLEIV HIEKPVGVIV QFGGQTPLKL 
AVSLEKAGVP IIGTSPDAID RAEDRERFQA LLFKLNLLQP DNGLARSFDE AEKIAERIGY 
PVVVRPSYVL GGRAMEIVYH VDALRNYMQN AVQASPDHPI LIDKFLEHAI EVDVDALCDG 
KSVVIGGIMQ HIEEAGIHSG DSACALPPFS LKPEIVDEIR RQTRELALEL GVVGLMNIQY 
AVKEDTIYLL EVNPRASRTV PFVSKATNRP LAKLAARVMA GKTLEDLQVH DEIIPSYISV 
KEAVFPFVKF PGVDTLLGPE MKSTGEVMGI DTNLYRAFAK AQLAAGVILP VKGKVFISLK 
DGDKQTFLEP ARRLVEGGFS LVATRGTASF LEANGLPVTA INKVKEGRPH CVDALKSKEI 
DMVFNTTFGP QSVSDSYSIR RTALMYNIAY YTTLEGIIAA VDAVLSLGRE KLDVVPLQEY 
YSGQ