| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_2572 |
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| Symbol | |
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| ID | 3704576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2923737 |
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| End bp | 2926958 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637739052 |
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| Product | carbamoyl-phosphate synthase, large subunit, glutamine-dependent |
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| Protein accession | YP_344555 |
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| Protein GI | 77166030 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0164695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAAC GGAACGATAT TAATAGCATA GTTATTCTCG GTGCCGGACC TATTGTGATT
GGTCAGGCCT GTGAGTTTGA CTATTCCGGT GCCCAAGCTT GCAAGTCTCT CAAAGAGGAA
GGCTATCGGG TGATTCTGGT GAATTCTAAT CCAGCAACCA TCATGACTGA TCCAGAACTA
GCCGATGCTA CTTACATTGA GCCGATTACC TGGAAAACGG TGGCCAAAAT CATTGAAAAG
GAGCGCCCCG ATGCATTATT ACCCACCATG GGCGGGCAAA CGGCTTTAAA CTGCGCACTG
GATTTGGCTC GCGAAGGAAT TCTGGAACGT TATGACGTGG AAATGATAGG AGCGAACCAG
GAAGCCATTA ATAAAGCCGA AGACCGGGAT CTCTTTCGCC AGGCGATGCA GAAAATCGGC
TTAGATATGC CCCGTTCGGC GATTGCCCAT AGCCTAGAAG AAGCGCAGCA GGCTCAGAGA
GATTTAGGAT TCCCGATTGT TATTCGGCCG TCGTTTACTT TGGGGGGCTC GGGGGGAGGG
ATTGCCTATA ACCGGGAAGA ATTCGTGGAA ATCTGTGAGC GAGGTCTAGA TCTCAGCCCC
AATTCAGAGC TGCTCATCGA TGAGTCTGTG CTTGGTTGGA AGGAATTTGA GATGGAGGTG
GTGCGGGATA GTAAGGATAA CTGCATCATT ATTTGCACTA TTGAAAATTT AGATCCGATG
GGCGTGCATA CGGGGGATTC CATTACCGTG GCGCCTGCTC AAACCCTTAC GGATAAGGAA
TACCAGGTGA TGCGCGATGC CGCCCTTGCA GTATTGCGCG AGATTGGGGT GGATACGGGT
GGCTCCAACG TGCAGTTCGC CGTTGATCCG GAGAATGGGC GGTTAATCAT TATCGAAATG
AACCCCCGGG TCTCCCGTTC TTCAGCCTTA GCTTCTAAAG CCACGGGTTT TCCCATTGCG
AAGGTGGCCG CAAAACTAGC CGTTGGCTAT ACGCTGGATG AGCTTCAGAA TGAAATTACT
GGTGGTCTGA CTCCGGCTTC CTTCGAGCCT AGTATTGATT ATGTGGTTAC GAAGATACCC
CGTTTTACCT TCGAAAAATT CCCCCGAGCG GATGCCCGCT TGACCACGCA GATGAAGTCA
GTAGGTGAAG TGATGGCTAT TGGCCGGAAC TTTCAAGAGT CCCTACAGAA GGCGCTCCGC
AGCTTAGAGA CGGGTACAGA TGGTTTCAAT GAAAAAGTGG ATCTGGCAGC GGAAGACGTT
GTGGAAACCT TACGGTACCA GCTACGGGTA CCCTCCGCGG ACAGGATCTA TTATCTTGCG
GATGCTTTCC GGGCTGGGTT TTCCATGGCG GAAATTTATG ACTTAAGTCA TATTGATCCC
TGGTTCTTGA CTCAGATTCA AGACTTAGTT GAAGTTGAGC AAGGATTGCG GGGTACTTCC
CTGGAGCAAG TGGAAAAAGA TCGACTCTAT CGTTTAAAGC GCCAGGGTTT TTCAGATCGT
AGGTTGGCCG TTCTCCTTGG AGCTGGGGAA GAGGAGGTAC GGCGGCGGCG GCATACGCTT
GGTATCCGCC CCGTTTATAA GCGAGTGGAT ACTTGCGGGG CTGAATTTGC TACCACCACA
GCTTATCTTT ACTCCACCTA CGATGAGGAG TGCGAGGCGG TCCCTAGTCA GCGTAATAAG
ATCATGGTAC TTGGAGGTGG ACCCAACCGC ATTGGTCAGG GGATTGAATT TGATTACTGT
TGCGTGCATG CCGCGTTGGC ATTACGGGAA GATGGTTATG AGACCATCAT GGTCAATTGC
AACCCGGAGA CGGTTTCCAC CGACTATGAT ACTTCCGACC GGCTCTACTT CGAGCCTTTG
ACTCTAGAAG ATGTTCTGGA GATTATTTCC TTGGAGCAGC CCCAAGGGGT TATCGTTCAA
TACGGCGGCC AAACGCCCCT CAAGCTAGCG CGTGCTTTGG AGGCGGCAGG GGCGCCGATT
ATCGGTACCT CCCCGGACTC TATCGATTTG GCCGAGGATC GGGAACGGTT TCAATGGCTC
ATTGAGAAAC TTGGGCTTAA GCAGCCTCCT AACCGTACTG CTCGCACCCA GGAAGAGGCT
ATCCGCTTAG CCGCTGAAAT TGGCTACCCT TTGGTGGTCA GGCCCTCCTA TGTACTTGGG
GGGCGCGCCA TGGAAATCGT TTACAATGCG GACGAACTCG CCAGGTACAT GAAAGAGGCG
GTGAGTGTTT CTAACGATTC TCCGGTGCTA CTGGACCGGT TTTTAGATGA AGCGACAGAG
GTGGATGTCG ATGCGATCTG TGATGGAGAG CAGGTCATGG TCGGTGGTAT CATGGAGCAT
ATTGAACAGG CCGGTGTCCA TTCTGGCGAC TCGGCATGCG CTTTACCGCC TTTTAGTTTG
AGCGCCGCGG TGCAGAACCG GCTGCGGGAG CAAGTGTATA ATATGGCTCG TGAGCTTAAG
GTGGTGGGTT TAATGAATAC CCAGTTCGCT ATCCAGGCAA ACGAGATCTA TATACTTGAG
GTTAATCCTC GCGCTTCCCG GACCGTGCCC TTTGTTTCCA AAACGATTGG TATTCCCCTT
GCCAAGGTTG CCGCCCGCTG CATGATGGGA CAGAGCTTAG CGAAACAAGG GATGATAGAG
GAAATAATAC CTCATTACTT TGCGGTAAAA GAAGCAGTTT TCCCCTTTAT CAAATTTTCC
GGCGTTGATC CTATCTTGGG GCCGGAAATG AAATCAACGG GGGAGGTGAT GGGGACTGGA
CGCTGTTTTG GAGAGGCTTT CTACAAGGCG CTTTTAGGGG CCGGAGTGGT ATTGCCCCAA
AAAGGCAAAG TTTTTATTAG TGTTCGAGAT GCCGATAAGC AGCGGATCGT TCCTGTTGCG
CAGGAACTCT CTAGGCTGGG TTTTGAGCTT TTAGCTACAC GGGGGACTAG CACGGTATTA
GATCAGGAGG GGGTTGCTTG TATCCAGATT AATAAGGTGC TCGAAGGTCA GCCCCATATC
GTGGACATGA TAAAAAATGA CGAAATTGCG CTTATCATTA ATACCACGGA AGGCCGTAAG
GCGGTTTCCG ATTCTTATAC CATTCGTCGT TCAGCTTTAC AGCATAAAGT GACCTATACT
ACCACCGTGG CTGGCGCGTG GGCCACGTGT GAAGCCCTGC GTGCAGAAAC CACCGATTCG
GTCTATCGAT TACAAGATTT ACAGCGGGAG GCGCGAAAAT GA
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| Protein sequence | MPKRNDINSI VILGAGPIVI GQACEFDYSG AQACKSLKEE GYRVILVNSN PATIMTDPEL
ADATYIEPIT WKTVAKIIEK ERPDALLPTM GGQTALNCAL DLAREGILER YDVEMIGANQ
EAINKAEDRD LFRQAMQKIG LDMPRSAIAH SLEEAQQAQR DLGFPIVIRP SFTLGGSGGG
IAYNREEFVE ICERGLDLSP NSELLIDESV LGWKEFEMEV VRDSKDNCII ICTIENLDPM
GVHTGDSITV APAQTLTDKE YQVMRDAALA VLREIGVDTG GSNVQFAVDP ENGRLIIIEM
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELQNEIT GGLTPASFEP SIDYVVTKIP
RFTFEKFPRA DARLTTQMKS VGEVMAIGRN FQESLQKALR SLETGTDGFN EKVDLAAEDV
VETLRYQLRV PSADRIYYLA DAFRAGFSMA EIYDLSHIDP WFLTQIQDLV EVEQGLRGTS
LEQVEKDRLY RLKRQGFSDR RLAVLLGAGE EEVRRRRHTL GIRPVYKRVD TCGAEFATTT
AYLYSTYDEE CEAVPSQRNK IMVLGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPL TLEDVLEIIS LEQPQGVIVQ YGGQTPLKLA RALEAAGAPI
IGTSPDSIDL AEDRERFQWL IEKLGLKQPP NRTARTQEEA IRLAAEIGYP LVVRPSYVLG
GRAMEIVYNA DELARYMKEA VSVSNDSPVL LDRFLDEATE VDVDAICDGE QVMVGGIMEH
IEQAGVHSGD SACALPPFSL SAAVQNRLRE QVYNMARELK VVGLMNTQFA IQANEIYILE
VNPRASRTVP FVSKTIGIPL AKVAARCMMG QSLAKQGMIE EIIPHYFAVK EAVFPFIKFS
GVDPILGPEM KSTGEVMGTG RCFGEAFYKA LLGAGVVLPQ KGKVFISVRD ADKQRIVPVA
QELSRLGFEL LATRGTSTVL DQEGVACIQI NKVLEGQPHI VDMIKNDEIA LIINTTEGRK
AVSDSYTIRR SALQHKVTYT TTVAGAWATC EALRAETTDS VYRLQDLQRE ARK
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