| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2886 |
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| Symbol | carB |
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| ID | 3836327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3328748 |
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| End bp | 3331996 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637826998 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_427970 |
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| Protein GI | 83594218 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.827795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAC GCACGGACAT CAAAAGCATC CTGATCATCG GGGCCGGCCC CATCGTTATC
GGCCAGGCCT GCGAATTCGA TTATTCCGGC GCCCAGGCCT GCAAGGCCCT GCGCGCCGAG
GGCTATCGGG TGATCCTGGT TAATTCGAAT CCGGCGACGA TCATGACCGA CCCGGAAACC
GCCGACGCCA CCTATATCGA GCCGATCACC CCAGAAATCG TCGAAGCCAT CATCGAGCGC
GAGCGCCCCG ACGCCCTGCT GCCGACCATG GGCGGCCAGA CGGCGCTCAA TACCGCCATG
GCCCTGGCCG ATCGCGGCGT TTTGACCAAA TACGGCGTCG AGATGATCGC GGCCAATAAG
GAGGTCATCG CCAAGGCCGA GGACCGCCTG CTATTCCGCG ACGCCATGCG CAAGATCGGC
CTGGATTGCC CGCGCAGCGC CCTGGTCCAC AGCATCGAGG AAAGCCGTCA GGCGCTCGAG
GAGATCGGCC TGCCGGTCAT CATCCGCCCG TCGTTCACCC TGGGCGGCCA GGGCGGCGGC
ATGGCCTTCA ACCGCGAGGA ATACGACCGC ATCGTCGCCA GCGGCCTCGC CGCCTCACCG
GTGCGCCAGA TCCTGGTCGA GGAAAGCGTC CTGGGTTGGA AGGAATACGA GATGGAGGTG
GTCCGCGACC GCGCGGACAA CTGCATCATC GTCTGCTCGA TCGAGAATAT CGATCCGATG
GGCGTTCATA CCGGCGATTC GATCACCGTG GCCCCGGCGC TGACCCTGAC CGACAAGGAA
TATCAGGTGA TGCGCAACGC CTCGATCGCC TGTCTGCGCG AAATCGGCGT GGAGACCGGC
GGCTCGAACG TGCAGTTCGC CGTCAACCCC AAGGACGGCC GGCTGGTGGT GATCGAGATG
AACCCCCGGG TCTCGCGCTC CTCGGCGCTG GCCTCGAAAG CCACGGGCTT CCCCATCGCC
AAGATCGCCG CCAAGCTGGC GGTGGGCTAT ACGCTGGATG AATTGTCCAA CGACATCACC
GGCGTCACCC CAGCCAGCTT CGAGCCGACC ATCGATTACG TGGTCACCAA GCTGCCGCGC
TTCACCTTCG AGAAGTTCCC CGATACCGAG GCCCTGCTGT CGTCGTCGAT GAAGTCGGTG
GGCGAGGCCA TGGCCATCGG CCGCACCTTC AAGGAAAGCC TGCAAAAGGG CCTGCGCTCG
CTGGAAATCG GCCTTGACGG CCTGGACGAG GTCGAGATCC CCGGATCGGC CGGTCAGGAC
GGCAAGGACG CCATCCGCGC CGCCCTGTCC AAGGCCCGCC CCGACCGCAT CCTGATCATC
GCCCAGGCCC TGCGCCAGGG CTTCACGGTC GAAGAAGTGC GGGCCATCTG CTACTACGAC
CCCTGGTTCC TCGAGCAGAT CAAGGAGATC GTCGACGAGG AACGGCGGCT GCGCGAAAAC
GGCCTGCCGG GCGACGCCGT CTCCCTGCAC CGGGTCAAGA AGATGGGCTT CTCCGACGCC
CGCCTCGCCA AGCTGACCGG CAAGACGGTG ACCGAGGTGT CCTTCCGCCG TCAGGTGCTC
AACGTCCATC CGGTCTATAA GCGCATCGAC ACCTGCGCCG CCGAATTCGC CTCGCGCACG
CCCTACATGT ATTCGTGCTA CGAGGGCGAC GGCCTGACCC CGGCCGAATG CGAGGCCGAG
GTCTCCGACC GCACCAAGAT CATCATCCTG GGCGGTGGCC CCAACCGCAT CGGCCAGGGC
ATCGAATTCG ATTATTGCTG CGTCCACGCC GCTTACGCCC TGTCGGACGC CGGCTTCGAG
ACCATCATGG TCAACTGCAA TCCGGAAACC GTGTCGACCG ATTACGATAC CTCGGACCGG
CTGTATTTCG AGCCGCTGAC CATCGAAGAC GTGGTCGAGC TGGCGCGCAA GGAACAGGCG
CGCGGCACGC TGCTCGGCTG CATCGTCCAG TACGGCGGCC AGACGCCGCT CAAGCTCGCC
CGCGGCCTGG AAGCCGCCGG CATTCCCGTG CTCGGCACCT CGCCCGACGC CATCGATCTG
GCCGAGGACC GCGACCGCTT CCAGAAGCTG ATCGCCAAGC TCGCCCTGCG CCAGCCGCGC
AACGGCACGG CGCTGTCGGT CGAACAGGCC CGCGCCATCG CCACCCGCGT CGGCTATCCG
GTGGTGATCC GCCCGTCCTA TGTTCTGGGC GGCCGGGCCA TGCAGATCGT CCACGACGAG
GCCCAACTCA ACGACTACAT GGTCAACGCC GTGAAGGTGT CGGGCGATGA TCCGGTGCTG
ATCGACAATT ATCTGTCAGG CGCCATCGAG GTCGATGTCG ACGCCATCGC CGATGGCGAG
ACCACCCATA TCGCCGGCAT CATGCAGCAC ATCGAGGAAG CGGGCATCCA TTCGGGCGAC
TCGGCCTGTT CGCTGCCGCC CTACTCCCTT GATGAAGCCA CCATCGCCGA ACTGACCAAG
CAGACCGAGG CCCTGGCCAA GGGCTTGAAC GTGCGCGGCC TGATGAACAT CCAGTTCGCC
ATCAAGGACG GCGATATCTA CATCCTCGAG GTCAATCCGC GCGCCAGCCG CACCGTGCCC
TTCGTCGCCA AGGCGACCGG CGTCGCCGTC GCCAAGATCG CCGCCCGGGT GATGGCCGGC
GAAAGCCTCG CCTCCTTCGG GCTGGTGACC AAGCGCCTCG CCCATGTCGC GGTCAAAGAG
GCGGTGTTCC CCTTCGCCCG CTTCCCCGGC GTCGATATCG TGCTTGGCCC CGAGATGAAA
TCGACCGGCG AGGTGATGGG CATCGACACC ACCTTCGCCC GCGCCTTCGC CAAATCCCAG
CTTGGCGCCG GCGTCACCCT GCCCGAGGGC GGGACGGCGT TCATCAGCGT GCGCGACGGC
GACAAGGCCG CCATCATGCC AATCGCCCGC GAATTGACCG AACTGGGCTT CCGCCTGGTC
GCCACGCGGG GCACCGCCGC CCTGCTGGCC GAGAACGGTC TCAGCGTCGA GGTGATCAAC
AAGGTCTTGG AAGGCCGGCC CCATTGCGTC GACGCCATGA TCAGCGGCGA TATCCATCTG
GTGTTCAACA CCACCGAGGG CATCCAGTCG CAAAAAGACA GCTTCGACAT CCGCCACACG
GCTCTGATGA GGAACATTCC CCATTACACC ACCGTGGCGG GTGCGACGGC GGCGGTGAAG
GCCATGACCG CCTTGCGGCA AGGTCATCTT GAAGTGGCTC CGTTACAGGA ATACTTTAAA
GTTTCCTGA
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| Protein sequence | MPKRTDIKSI LIIGAGPIVI GQACEFDYSG AQACKALRAE GYRVILVNSN PATIMTDPET
ADATYIEPIT PEIVEAIIER ERPDALLPTM GGQTALNTAM ALADRGVLTK YGVEMIAANK
EVIAKAEDRL LFRDAMRKIG LDCPRSALVH SIEESRQALE EIGLPVIIRP SFTLGGQGGG
MAFNREEYDR IVASGLAASP VRQILVEESV LGWKEYEMEV VRDRADNCII VCSIENIDPM
GVHTGDSITV APALTLTDKE YQVMRNASIA CLREIGVETG GSNVQFAVNP KDGRLVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELSNDIT GVTPASFEPT IDYVVTKLPR
FTFEKFPDTE ALLSSSMKSV GEAMAIGRTF KESLQKGLRS LEIGLDGLDE VEIPGSAGQD
GKDAIRAALS KARPDRILII AQALRQGFTV EEVRAICYYD PWFLEQIKEI VDEERRLREN
GLPGDAVSLH RVKKMGFSDA RLAKLTGKTV TEVSFRRQVL NVHPVYKRID TCAAEFASRT
PYMYSCYEGD GLTPAECEAE VSDRTKIIIL GGGPNRIGQG IEFDYCCVHA AYALSDAGFE
TIMVNCNPET VSTDYDTSDR LYFEPLTIED VVELARKEQA RGTLLGCIVQ YGGQTPLKLA
RGLEAAGIPV LGTSPDAIDL AEDRDRFQKL IAKLALRQPR NGTALSVEQA RAIATRVGYP
VVIRPSYVLG GRAMQIVHDE AQLNDYMVNA VKVSGDDPVL IDNYLSGAIE VDVDAIADGE
TTHIAGIMQH IEEAGIHSGD SACSLPPYSL DEATIAELTK QTEALAKGLN VRGLMNIQFA
IKDGDIYILE VNPRASRTVP FVAKATGVAV AKIAARVMAG ESLASFGLVT KRLAHVAVKE
AVFPFARFPG VDIVLGPEMK STGEVMGIDT TFARAFAKSQ LGAGVTLPEG GTAFISVRDG
DKAAIMPIAR ELTELGFRLV ATRGTAALLA ENGLSVEVIN KVLEGRPHCV DAMISGDIHL
VFNTTEGIQS QKDSFDIRHT ALMRNIPHYT TVAGATAAVK AMTALRQGHL EVAPLQEYFK
VS
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