Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0789 |
Symbol | |
ID | 6876753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 748933 |
End bp | 752172 |
Gene Length | 3240 bp |
Protein Length | 1079 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642788670 |
Product | carbamoyl-phosphate synthase, large subunit |
Protein accession | YP_002219246 |
Protein GI | 198282925 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAC ACCAGGACAT CAAAAGCGTC CTCCTCATCG GCGCCGGACC CATCATCATC GGCCAGGCCT GTGAATTCGA TTATTCCGGC GTACAGGCCT GCAAGGCGTT GCGGGAAGAG GGTTGCCGGG TCATTCTGGT CAACTCCAAC CCTGCCACCA TCATGACCGA TGCGCAGACT GCGGACGCCA CCTATATCGA ACCCGTCGAG TGGCAAACCG TGGCGCGCAT CATCGCCATG GAACGCCCCG ATGCCATTCT CCCCACCATG GGCGGTCAGA CCGCACTGAA CTGTGCCCTG GACCTACACC GGGAGGGGGT GTTGGAGCAG TACGGTGTCA AACTAATCGG CGCTTCCGTG GAAGCCATCC GTGAGGCCGA AGATCGCGGC CTCTTCAAAA AGGCCATGGA AGAAATCGGC CTGGAAGTGG CCCGCTCCGC TTTCGGCCAT GATATGGAAG GCGCGCGCCA GATCGCGGAG GATATCGGCT TTCCGGTCAT CATCCGGCCA TCCTTCACCC TGGGCGGCAC CGGCGGCGGC ATTGCCTACA ACCGTGAGGA ATTTGAGGAC ATCGCGGCGC GCGGCCTGGA GGCCAGTCCT ACCCACGAAA TCCTCATCGA AGAATCCATC ATCGGTTGGA AGGAATTCGA GATGGAAGTG GTCCGCGACC GGGCGGATAA CTGTATCATC GTTTGCTCTA TCGAGAACTT CGATCCCATG GGCATCCATA CCGGGGACTC CATCACCGTA GCCCCCGCCC AGACTCTTAC GGATCGTGAA TACCAGCGCA TGCGGGATGC CTCCATCGCC GTGTTGCGGC GTATCGGGGT GGATACCGGC GGCTCCAATG TACAGTTCGC CGTCAATCCC GAAGATGGGC GACTGATCGT CATCGAGATG AACCCGCGGG TGTCGCGTTC TTCGGCGCTG GCCTCCAAGG CCACCGGGTT TCCCATTGCC AAAATTGCCG CCAAGCTCGC ACTGGGTTAC ACCCTGGATG AGCTGCGCAA TGACATCACC CAGGCGACAC CGGCGAGTTT CGAGCCGACC ATCGATTATG TGGTCACCAA AATCCCCCGC TTCGCCTTCG AGAAGTTTCC CGAGGCCGAT GCCCACCTGA CCACTCAGAT GAAGTCAGTG GGTGAAGTGA TGGCCATTGG CCGCAGCTTC CAGGAGTCGC TGCAAAAGGC GCTGCGTGGC CTGGAGACGG GTGTGGATGG CCTGGATGAG AAACTCATCG GCAATGATCC GGACACCCTG CAAAAACTGG AACAGGAGTT ACGGGTTCCC GGTGCCGATC GCCTCTGGTA CCTGGCGGAC GCCGTACGGC GCGGCTGGGA TCAGGACAGC CTGCAACGCA TCACCCGCAT CGACCCCTGG TTTCTGGAGC AGATTTTCGA GATCATTCAG ACCGAGGAAA GCCTGCGCGG TCTCTCTCTG GCGGGCCTCG ACGATGCCCG GCTCCGCACC CTCAAAGGCA TGGGTTTCTC GGACCGGCGG CTGTCCCGCC TGTTGGGTTG CCACGAGCAG CAGTTGCGTG AACAGCGCCA GAGGCTGGGT GTCCGCCCCG TCTACAAACG GGTGGATACC TGTGCCGCCG AGTTCCGCTC GCCGACTCCG TATCTCTACT CCACCTATGA GACGGAGTGC GAGGCGGAAC CGGGTGTTAA ACCCAAGATC ATGATTCTGG GCGGCGGTCC CAACCGGATC GGACAGGGCA TCGAGTTTGA CTACTGTTGC GTGCATGCGG CCATGGCCCT GCAGGAGGAT GGCTTTGAGA CCATCATGGT CAACTGCAAC CCGGAAACGG TGTCCACCGA CTATGACACT TCCGATCGCC TGTATTTTGA GCCGCTCACC CTGGAAGACG TCCTCGAAAT CGTCGCCGTC GAAAAGCCGC ATGGTGTGAT CGTCCAGTTT GGCGGCCAGA CACCGCTGAA GCTCGCCAAC GATCTGGAGG CCGCCGGGGT GCCCATCATC GGCACCACAC CGGATTCCAT CGATCTGGCT GAGGATCGCG AGCGCTTCCA GCAGCTTTTG CAACGCCTCG ACCTGCGGCA ACCGGAAAAC GCCATTGCCC GGAGCGCCCC GGAAGCCCTG AGCAAGGCGC GAGCGCTGGG CTACCCGCTG GTGGTACGCC CCTCCTATGT GCTGGGCGGT CGCGCCATGC GCATCGTCTA TGGGGAAGAC GACCTGCAAC GCTACATGTT GGAAGCGGTG CGCATCTCCA ATGACCAGCC CATCCTCCTG GACCGTTTCC TGAATGACGC CCTGGAAGTG GACGTCGATG CCGTCGCCGA CAGCGGGCAA CAGGTGATCG TGGCTGGGAT CATGGAGCAC ATCGAGCAGG CGGGAGTCCA CAGCGGCGAC TCGGCCTGCT GCCTGCCGCC CTACTCTCTG TCCCCGGCCA TTCAAGACGA AATCCGGCGG CAGACCGTGG AACTGGCCCT GGCGCTCGGG GTGGTGGGCC TGATGAACTG TCAGTTCGCC GTCCAGAACG AGCGCATCTA TGTGCTGGAG GTTAACCCGC GCGCGTCACG GACGGTACCT TTCGTCTCCA AGGCTACGGG ATGGCCCCTG GCCAAAATCG CCTCCCGCTG CATGACCGGA AAGTCTTTGG CCGCGCAGGG CGTTCCACAG ATTCCCAACC CGCCCCATTT CAGCGTCAAG GAAGCGGTCT TCCCCTTTAT CAAATTTCCC GGCGTGGATA TACTGCTAGG GCCGGAAATG AAGTCTACGG GCGAAGTGAT GGGTATAGGC GCCAGTTTTG GTGAGGCTTT TCTAAAGGCG CAGGTTGGTG CGGGCGAACA CTTTCCGAGC TCCGGCACGG TTTTTCTCAG TGTTCGCGAT GCCGATAAAA AGGGGCTCAC CCCGACCGCT CGGATCCTGT CCGAACTCGG GTTCAAACTG ATCGCCACTG GGGGCACCGC AGCCTTCCTG CAGAAGGAAG GTCTGGAAGT CGCCCCGGTT AACAAGGTGA CCGAAGGCCG TCCCCATATC GTCGATGCAA TCAAGAACGG CAAGGTGCAG ATCATCATCA ACACCGTGGA CGAACGCCAG TCGGTGCGGG ATTCTTTCAG TATCCGCCGC GCCGCTCTGC AGATGGGATT GACCTATTAC ACTACCCTGG CTGGCGCCAC CGCGGGCGCC GCCGCCATTC ACGCTCTGAT GACGGAAGAA TGCAGCGTAC TCCGGCTCCA GGATCTGAAC CAGAAAAGTA CCAGCACGAG GCAGATATGA
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Protein sequence | MPKHQDIKSV LLIGAGPIII GQACEFDYSG VQACKALREE GCRVILVNSN PATIMTDAQT ADATYIEPVE WQTVARIIAM ERPDAILPTM GGQTALNCAL DLHREGVLEQ YGVKLIGASV EAIREAEDRG LFKKAMEEIG LEVARSAFGH DMEGARQIAE DIGFPVIIRP SFTLGGTGGG IAYNREEFED IAARGLEASP THEILIEESI IGWKEFEMEV VRDRADNCII VCSIENFDPM GIHTGDSITV APAQTLTDRE YQRMRDASIA VLRRIGVDTG GSNVQFAVNP EDGRLIVIEM NPRVSRSSAL ASKATGFPIA KIAAKLALGY TLDELRNDIT QATPASFEPT IDYVVTKIPR FAFEKFPEAD AHLTTQMKSV GEVMAIGRSF QESLQKALRG LETGVDGLDE KLIGNDPDTL QKLEQELRVP GADRLWYLAD AVRRGWDQDS LQRITRIDPW FLEQIFEIIQ TEESLRGLSL AGLDDARLRT LKGMGFSDRR LSRLLGCHEQ QLREQRQRLG VRPVYKRVDT CAAEFRSPTP YLYSTYETEC EAEPGVKPKI MILGGGPNRI GQGIEFDYCC VHAAMALQED GFETIMVNCN PETVSTDYDT SDRLYFEPLT LEDVLEIVAV EKPHGVIVQF GGQTPLKLAN DLEAAGVPII GTTPDSIDLA EDRERFQQLL QRLDLRQPEN AIARSAPEAL SKARALGYPL VVRPSYVLGG RAMRIVYGED DLQRYMLEAV RISNDQPILL DRFLNDALEV DVDAVADSGQ QVIVAGIMEH IEQAGVHSGD SACCLPPYSL SPAIQDEIRR QTVELALALG VVGLMNCQFA VQNERIYVLE VNPRASRTVP FVSKATGWPL AKIASRCMTG KSLAAQGVPQ IPNPPHFSVK EAVFPFIKFP GVDILLGPEM KSTGEVMGIG ASFGEAFLKA QVGAGEHFPS SGTVFLSVRD ADKKGLTPTA RILSELGFKL IATGGTAAFL QKEGLEVAPV NKVTEGRPHI VDAIKNGKVQ IIINTVDERQ SVRDSFSIRR AALQMGLTYY TTLAGATAGA AAIHALMTEE CSVLRLQDLN QKSTSTRQI
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