| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0672 |
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| Symbol | |
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| ID | 7093753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 729297 |
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| End bp | 732620 |
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| Gene Length | 3324 bp |
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| Protein Length | 1107 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643464007 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_002361006 |
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| Protein GI | 217976859 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.715776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGC GGACCGACAT CTCGACGATC CTTATCATCG GCGCGGGACC GATCATCATC
GGACAGGCCT GCGAATTCGA CTATTCCGGC ACGCAGGCAT GCAAGGCGCT GCGCGCAGAA
GGTTACCGGA TCGTCCTCGT CAACTCCAAT CCGGCGACGA TCATGACGGA CCCGGACATG
GCCGACCGCA CCTATATCGA GCCGATCGTT CCCGAGGCCG TCGCCAAGAT CATCGCCAAG
GAAAGATATG CCGCGCCGGG GGGCTTCGCC CTGCTGCCGA CCATGGGCGG CCAGACGGCG
TTGAATTGCG CGCTCTCGCT CAAGAAAATG GGCATTCTCG AGCAATATGA CGTCGAGATG
ATCGGCGCCA GCGCCGAGGC GATCGACATG GCCGAGGATC GCGAATTGTT CCGCGAGGCG
ATGTCGCGCA TCGGCCTGTC GACGCCGCGT TCGCACCAGA TCAAGACGCT CTCCCAGGCG
CTCGCCATCA TCGACGATAT CGGCCTGCCG GCGATCATCC GTCCCTCCTT CACCATGGGC
GGGACCGGCG GCGGCATCGC CTATAACAAG GCGGAGTTCA TCGACATCAT CGAGCGGGGC
ATTGACGCCT CGCCGACAAG CGAAGTGCTG GTCGAGGAAA GCGTTCTCGG CTGGAAGGAA
TATGAAATGG AGGTCGTCCG CGACAAGGCG GACAATTGCA TCATCGTCTG CTCCATCGAG
AACATCGATC CGATGGGCGT TCACACAGGC GATTCCATCA CGGTCGCGCC GGCGCTGACG
CTGACCGACA AGGAATATCA GATCATGCGC GACGCTTCTC TCGCGGTGCT GCGCGAGATC
GGCGTCGAAA CGGGCGGCTC CAACGTCCAG TTCGCGGTCA ATCCAGCCGA CGGACGCATG
ATCGTCATTG AAATGAACCC TCGCGTGTCG CGCTCCTCGG CCCTCGCCTC GAAGGCGACC
GGCTTCCCGA TCGCCAAGGT AGCGGCCAAG CTCGCGGTCG GCTTCACCCT CGACGAGATC
GAAAACGACA TCACCGGCGG CGCGACGCCG GCGTCCTTCG AGCCGAGCAT TGATTATGTC
GTCACCAAAA TCCCGCGCTT CGCTTTCGAG AAATTTCCCG GCGCCGACAA TATTTTGACC
ACCGCGATGA AGTCGGTCGG CGAATCCATG GCGATCGGGC GCACCTTCGC CGAAAGCCTG
CAGAAGGCGC TGCGTTCTCT GGACATCGGG CTCGACGGGC TCGACGAGAT CGAGATCGAA
GGGCTCGGCC TTGGCGACGA CATGAATGCG CTGCGCGCCG CGCTCGGCCG GCCGACGCCG
GACCGGCTGC TCGTCGCGGC GCAGGCGTTG CGCTATGGCA TGACGCCGGC CGAGATCCAC
GAGGCCTGCC GTATCGACGT CTGGTTTCTC GAGCGGCTGC AGGAAATTCT CGACCTTGAG
GCGCTGGTGC GCGCGCGCGG CCTGCCCGGC GACAGCGCCA ATCTGCGCAT GCTGAAGGCG
GCCGGCTTTT CCGACGCCCG CCTCGCCGCT CTGACCGGGT CCTCCGCAGC CGCCGTCGGG
GCGCTCCGCC GCAGCCTTGG CGTGCGGCCG GTCTATAAGC GCATCGACAC CTGCGCCGCC
GAATTCGCCT CGCCGACGGC CTATATGTAT TCGACCTATG CGCCGCCCTT CGCCGGGATC
TCGGCCGACG AGGCGCGCCC CTCGGATCGC GAAAAAGTCG TCATCCTCGG CGGCGGCCCG
AACCGCATCG GCCAGGGCAT CGAATTCGAC TATTGCTGCT GTCACGCCTC CTTCGCCCTG
CGCGAGCGGG GGATCGAGAC GATCATGGTC AATTGCAACC CGGAAACGGT TTCGACCGAC
TACGACACCT CCGACCGGCT CTATTTCGAG CCGCTGACGA TGGAGGACGT ACTCGAAATC
CTCGCCAAGG AAAGCGAGGC CGGCAAGCTG AAGGGCGTCA TCGTGCAGTT CGGCGGCCAG
ACGCCGCTCA AACTGGCGGA GGGACTGCAG AGGGCGGGAA TCCCGATTCT CGGCACCTCG
GTTGATTCGA TCGACCTCGC CGAGGACCGC GACCGCTTCA AGCGCCTGCT CGACAAGATC
GGGCTGAAGC AGCCGAAGAA CGGCATCGCC TATTCGGTCG AGCAATCGCG CATCGTCGCC
TCGGATCTTG GCCTGCCGCT CGTGGTGCGC CCGTCCTATG TGCTGGGCGG GCGGGCCATG
GCGATCATCC GCGATCATGC CGAATTCGAC GATTATCTGC TCGGAGTTCT GCCCGGCCTC
GTGCCCTCAG ACGTCAAGGC GCGCTATCCG AACGACAAGA CCGGGCAGAT CAATACGGTG
CTCGGCAAGA ATCCCCTGCT GTTCGACCGC TATCTCAGCG ACGCCGTCGA AGTCGACGTC
GACGCTTTGT CGGACGGGAC CGACGTCTAT ATCTGCGGCG TCATGGAGCA TATCGAGGAG
GCCGGTATTC ATTCGGGCGA TAGCGCCTGC TCGCTGCCGC CGCGCTCGCT GTCGCCGGAC
ATGATCGCAA AGCTCGAACG CCAGACCCGC GACCTCGCGC TCGCGCTTGG CGTCGGCGGG
TTGATGAATG TGCAATATGC GCTGAAGGAC GGGGAAATCT ACGTGCTCGA GGTGAACCCC
CGCGCCGCCC GCACCGTGCC CTTCGTCGCC AAGGTGATCG GGGTTCCGAT CGCCAAGATC
GCCGCCCGCA TCATGGCCGG CGAGAGCCTC GCCAGCTTCG GCCTGACGCC GCCCCGCTTC
GATCACGTCG GCGTCAAGGA GAGCGTGTTT CCCTTCGCGC GCTTTCCCGG CGTCGACACG
GTGCTCGGCC CGGAAATGCG CTCGACCGGC GAGGTCATGG GGCTCGACCG CTCCTTCGCT
GTCGCCTTCG CCAAGAGCCA GCTCGGCGGC GGCACCAATG TGCCGACCTC GGGCGCGGTG
TTCGTATCCG TCCGCGACGC CGACAAGCAG CGCGTGCTCG GCACGATCAA GCTATTGGCC
GGGCTTGGTT TCCGCATCCT TGCGACCGGG GGCACCGCCC GCTTCCTTCA CGCCGAAGGA
GTCGCGGCGC AGCGCATCAA CAAAGTCTCG GAAGGCCGGC CGCATGTGGT CGATCTCATC
AAGAACGGCA GCGTGCAGCT CGTCCTCAAT ACGACCGAAG GCAAGCAGGC CCTCGCCGAC
TCGCGTTCGT TGCGCCGCGC GGCGCTTTTG CACAAAGTGC CCTATTACAC GACGCTCGCC
GGGGCGATCG CGGCGTCCGA AGGAATCAAG GCCTATATCG CCGGCGATCT CGAAGTCCGC
GCGCTGCAGG ATTATTTCAG TTAA
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| Protein sequence | MPKRTDISTI LIIGAGPIII GQACEFDYSG TQACKALRAE GYRIVLVNSN PATIMTDPDM
ADRTYIEPIV PEAVAKIIAK ERYAAPGGFA LLPTMGGQTA LNCALSLKKM GILEQYDVEM
IGASAEAIDM AEDRELFREA MSRIGLSTPR SHQIKTLSQA LAIIDDIGLP AIIRPSFTMG
GTGGGIAYNK AEFIDIIERG IDASPTSEVL VEESVLGWKE YEMEVVRDKA DNCIIVCSIE
NIDPMGVHTG DSITVAPALT LTDKEYQIMR DASLAVLREI GVETGGSNVQ FAVNPADGRM
IVIEMNPRVS RSSALASKAT GFPIAKVAAK LAVGFTLDEI ENDITGGATP ASFEPSIDYV
VTKIPRFAFE KFPGADNILT TAMKSVGESM AIGRTFAESL QKALRSLDIG LDGLDEIEIE
GLGLGDDMNA LRAALGRPTP DRLLVAAQAL RYGMTPAEIH EACRIDVWFL ERLQEILDLE
ALVRARGLPG DSANLRMLKA AGFSDARLAA LTGSSAAAVG ALRRSLGVRP VYKRIDTCAA
EFASPTAYMY STYAPPFAGI SADEARPSDR EKVVILGGGP NRIGQGIEFD YCCCHASFAL
RERGIETIMV NCNPETVSTD YDTSDRLYFE PLTMEDVLEI LAKESEAGKL KGVIVQFGGQ
TPLKLAEGLQ RAGIPILGTS VDSIDLAEDR DRFKRLLDKI GLKQPKNGIA YSVEQSRIVA
SDLGLPLVVR PSYVLGGRAM AIIRDHAEFD DYLLGVLPGL VPSDVKARYP NDKTGQINTV
LGKNPLLFDR YLSDAVEVDV DALSDGTDVY ICGVMEHIEE AGIHSGDSAC SLPPRSLSPD
MIAKLERQTR DLALALGVGG LMNVQYALKD GEIYVLEVNP RAARTVPFVA KVIGVPIAKI
AARIMAGESL ASFGLTPPRF DHVGVKESVF PFARFPGVDT VLGPEMRSTG EVMGLDRSFA
VAFAKSQLGG GTNVPTSGAV FVSVRDADKQ RVLGTIKLLA GLGFRILATG GTARFLHAEG
VAAQRINKVS EGRPHVVDLI KNGSVQLVLN TTEGKQALAD SRSLRRAALL HKVPYYTTLA
GAIAASEGIK AYIAGDLEVR ALQDYFS
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