| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1521 |
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| Symbol | carB |
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| ID | 1220350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1622987 |
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| End bp | 1626232 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637237904 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | NP_519642 |
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| Protein GI | 17546240 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGACAT CAAAACCATC CTGATCATCG GCGCGGGCCC GATCATCATC
GGCCAGGCGT GTGAATTCGA TTACTCCGGC GCGCAGGCCT GCAAGGCGCT GCGCGAGGAA
GGCTTCAAGG TGGTCCTGGT CAACAGCAAC CCGGCCACCA TCATGACCGA CCCCAGCACG
GCCGATGTGA CCTACATCGA GCCGATCACC TGGGAAGTGG TCGAGCGCAT CATCGCCAAG
GAGCGTCCGG ACGCGATCCT GCCGACCATG GGCGGCCAGA CCGCGCTGAA CTGCGCGCTG
GACCTGCACC GCCACGGCGT GCTCGAGAAG TACAACGTCG AGCTGATCGG CGCCTCGCCC
GAGGCCATCG ACAAGGCCGA AGACCGCCAG AAGTTCAAGG AAGCGATGAC CAAGATCGGC
CTGGGTTCGG CCAAGTCGGG CATCGCGCAT TCGCTGGAAG AGGCGCTGGC CGTGCAGGCG
CAGATCGCCC GCGAGACCAG CTCCGGCGGC TACCCGATCG TGATCCGTCC GTCGTTCACG
CTGGGCGGCA CGGGCGGCGG CATCGCCTAC AACCGCGAAG AGTTCGAGGA CATCTGCAAG
CGCGGCCTGG ATCTCTCCCC GACCAACGAG CTGCTGATCG AAGAATCGCT GCTCGGCTGG
AAGGAATACG AGATGGAGGT GGTCCGCGAC AAAAAGGACA ACTGCATCAT CGTCTGCTCG
ATCGAGAACC TGGACCCGAT GGGCATCCAC ACCGGCGACT CCATCACCGT GGCGCCGGCG
CAGACGCTGA CCGACAAGGA ATACCAGATC CTGCGCAACG CCTCGCTGGC CGTGCTGCGC
GAGATCGGTG TGGATACCGG CGGCTCGAAC GTGCAGTTCT CGATCAATCC GGAGGACGGC
CGGATGATCG TGATCGAGAT GAACCCGCGT GTGTCGCGCT CGTCGGCGCT GGCCTCCAAG
GCCACCGGCT TCCCGATCGC CAAGGTGGCC GCCAAGCTGG CGGTCGGCTA CACGCTGGAC
GAACTGAAGA ACGAGATCAC CGGCGGCGCG ACCCCGGCGT CGTTCGAGCC CTCGATCGAC
TACGTGGTCA CCAAGGTGCC GCGTTTCGCC TTCGAGAAAT TCCCGCAGGC CGACAGCCAC
CTGACCACGC AGATGAAGTC GGTGGGCGAG GTGATGGCGA TGGGCCGCAC GTTCCAGGAG
TCGTTCCAGA AGGCGCTGCG CGGCCTGGAA GTCGGCGTGG ATGGCCTGGA CGAAAAGTCC
TCCGACCGCG ACGAGATCAT CGCCGAGATC GGCGAGCCGG GCCCGGACCG CATCTGGTAC
CTGGGCGATG CGTTCCGCCT CGGCCTGTCG ATCGACGAGG TGTATGCCGA GACGGCCGTC
GATCCGTGGT TCCTCGCCCA GATCGAAGAC ATCGTCAGGA CCGAAGCGCT GGTCAAGGCC
CGCACGCTCG ATAGCCTGTC GGCCGCCGAA CTGCGCCTGC TCAAGCAGAA GGGCTTCTCC
GACCGCCGCC TGGCCACGCT GATGAAGACC ACGGCCCAGG CCGTGCGCGA GAAGCGCATC
GCCGAGAAGG TCCGCCCGGT CTACAAGCGC GTCGACACCT GCGCGGCCGA GTTCGCCACC
AACACGGCGT ACCTGTACTC GACCTACGAG GCCGAGCACG GCGAATGCGA AGCCGACCCG
ACCGAGCGCA AGAAGATCAT GGTGCTGGGC GGTGGCCCGA ACCGGATCGG CCAGGGCATC
GAGTTCGACT ACTGCTGCGT GCATGCCGCG CTGGCGCTGC GCGAAGACGG GTACGAGACC
ATCATGGTCA ACTGCAACCC GGAAACCGTC TCGACCGACT ACGACACCTC CGACCGCCTG
TACTTCGAGC CGGTGACGCT GGAAGACGTG CTCGAGATCG TCGACAAGGA AAAGCCGGTT
GGCGTGATCG TGCAGTACGG CGGCCAGACC CCGCTGAAGC TCGCGCTCGA CCTGGAAGCC
AACGGCGTGC CCATCATCGG CACGACGCCG GACATGATCG ACGCGGCCGA AGACCGCGAG
CGCTTCCAGA AGCTGCTGCA CGACCTGGGC CTGCGCCAGC CGCCCAACCG CACCGCGCGC
GCCGAAGACG AAGCCCTCAA GCTGGCCGAC GAGATCGGCT ACCCGCTGGT GGTGCGCCCG
TCGTACGTGC TGGGTGGCCG TGCCATGGAA ATCGTGCATG AGCCGCGCGA CCTCGAGCGC
TACATGCGCG AGGCTGTGAA GGTGTCGAAC GACAGCCCGG TGCTGCTCGA CCGCTTCCTG
AACGACGCCA TCGAATGCGA CGTCGATTGC CTGTCCGACG GCAAGCGCGT GTTCATCGGC
GGCGTGATGG AGCACATCGA GCAGGCCGGC GTGCACTCGG GCGACTCGGC GTGCTCGCTG
CCGCCGTATT CGCTGTCGCA GGCCACCGTC GACGAGCTCA AGCGCCAGAC CGCCGCGATG
GCCCGCGCGC TGAACGTGAT CGGCCTGATG AACGTGCAGT TCGCCATCCA GCAGAAGGGC
GGCGAGGACA TCGTCTACGT GCTGGAAGTG AATCCGCGCG CCTCGCGCAC GGTGCCGTAC
GTGTCCAAGG CAACCGGCAT CTCGCTGGCC AAGGTGGCGG CGCGCTGCAT GGCCGGCCAG
TCGCTGGACG AGCAGGGCAT CCATGATGAG GTCGTGCCGT CGTACTACAG CGTCAAGGAA
GCGGTGTTCC CGTTCAACAA GTTCCCGGGC GTCGATCCGG TGCTCGGACC GGAAATGCGC
TCCACCGGCG AAGTGATGGG CGTCGGCCGC ACCTTCGGCG AAGCGCTGTT CAAGAGCCAG
CTTGCCGCCG GCTCGCGTCT GCCCGAGAAG GGCACCGTGC TGATGACGGT CAAGGACAGC
GACAAGCCGC GCGCCATCGA AGTCGCCCGC ACGCTGCACA CGCTCGGCTA CCCGATCGTG
GCCACGCGTG GCACGGCGTC GGCCATCGAG GCGGCCGGCA TTCCGGTGCG CGTGGTCAAC
AAGGTGAAGG ATGGCCGTCC GCACATCGTC GACATGATCA AGAACGGTGA GCTGGCGCTC
GTGTTCACCA CCGTCGACGA GACGCGCGCG GCCATCGCCG ACTCGCGTTC CATCCGGACC
GCCGCGCTGG CCAACCGCGT GACCTACTAC ACCACCATCG CCGGCGCCCG TGCCGCGGTG
GAGGGCCTGA AGCACCTGCA GAACCTGGAC GTCTACGATC TCCAGGGCCT GCACGCCAGC
CTGTAA
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| Protein sequence | MPKRTDIKTI LIIGAGPIII GQACEFDYSG AQACKALREE GFKVVLVNSN PATIMTDPST
ADVTYIEPIT WEVVERIIAK ERPDAILPTM GGQTALNCAL DLHRHGVLEK YNVELIGASP
EAIDKAEDRQ KFKEAMTKIG LGSAKSGIAH SLEEALAVQA QIARETSSGG YPIVIRPSFT
LGGTGGGIAY NREEFEDICK RGLDLSPTNE LLIEESLLGW KEYEMEVVRD KKDNCIIVCS
IENLDPMGIH TGDSITVAPA QTLTDKEYQI LRNASLAVLR EIGVDTGGSN VQFSINPEDG
RMIVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGA TPASFEPSID
YVVTKVPRFA FEKFPQADSH LTTQMKSVGE VMAMGRTFQE SFQKALRGLE VGVDGLDEKS
SDRDEIIAEI GEPGPDRIWY LGDAFRLGLS IDEVYAETAV DPWFLAQIED IVRTEALVKA
RTLDSLSAAE LRLLKQKGFS DRRLATLMKT TAQAVREKRI AEKVRPVYKR VDTCAAEFAT
NTAYLYSTYE AEHGECEADP TERKKIMVLG GGPNRIGQGI EFDYCCVHAA LALREDGYET
IMVNCNPETV STDYDTSDRL YFEPVTLEDV LEIVDKEKPV GVIVQYGGQT PLKLALDLEA
NGVPIIGTTP DMIDAAEDRE RFQKLLHDLG LRQPPNRTAR AEDEALKLAD EIGYPLVVRP
SYVLGGRAME IVHEPRDLER YMREAVKVSN DSPVLLDRFL NDAIECDVDC LSDGKRVFIG
GVMEHIEQAG VHSGDSACSL PPYSLSQATV DELKRQTAAM ARALNVIGLM NVQFAIQQKG
GEDIVYVLEV NPRASRTVPY VSKATGISLA KVAARCMAGQ SLDEQGIHDE VVPSYYSVKE
AVFPFNKFPG VDPVLGPEMR STGEVMGVGR TFGEALFKSQ LAAGSRLPEK GTVLMTVKDS
DKPRAIEVAR TLHTLGYPIV ATRGTASAIE AAGIPVRVVN KVKDGRPHIV DMIKNGELAL
VFTTVDETRA AIADSRSIRT AALANRVTYY TTIAGARAAV EGLKHLQNLD VYDLQGLHAS
L
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