| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4589 |
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| Symbol | carB |
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| ID | 5192142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5132682 |
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| End bp | 5135849 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589071 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001269893 |
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| Protein GI | 148549791 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.387511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGGCC AGGCCTGCGA ATTCGACTAC TCCGGCGCGC AGGCCTGTAA AGCCCTGCGC
GAGGAAGGTT TCCGCGTCAT CCTGGTGAAC TCCAACCCAG CCACCATCAT GACCGACCCG
GCCATGGCCG ACGCCACCTA CATCGAGCCG ATCAAGTGGC AATCGGTGGC CAAGATCATC
GAGAAAGAGC GCCCGGACGC CGTCCTGCCG ACCATGGGTG GCCAGACCGC CCTGAACTGC
GCCCTGGACC TGGAGCGCCA CGGCGTTCTG GAGAAGTTCG GCGTAGAGAT GATCGGTGCC
AACGCTGACA CCATCGACAA GGCCGAAGAC CGCTCGCGCT TCGACAAGGC CATGAAGGAC
ATCGGCCTGG AGTGCCCGCG CTCCGGTATC GCCCACAGCA TGGAAGAGGC CAATGCGGTC
CTCGAGAAGC TTGGCTTCCC ATGCATCATT CGCCCGTCGT TCACCATGGG CGGCACCGGC
GGCGGTATCG CTTACAACCG TGAAGAGTTC GAAGAAATCT GCACCCGTGG TCTGGACCTG
TCGCCGACCA AAGAGCTGCT GATCGACGAA TCGCTGATCG GCTGGAAGGA ATACGAGATG
GAGGTGGTCC GCGACAAGAA GGACAACTGC ATCATCGTTT GCTCGATCGA GAACTTCGAC
CCGATGGGTG TGCACACCGG TGACTCGATC ACGGTTGCCC CGGCACAGAC CCTGACCGAC
AAGGAATACC AGATCATGCG CAACGCCTCG CTGGCGGTGC TGCGTGAAAT CGGTGTGGAA
ACCGGCGGTT CCAACGTCCA GTTCGGCATT TGCCCGAACA CCGGCCGCAT GGTCGTCATC
GAGATGAACC CGCGTGTATC GCGTTCGTCC GCCCTGGCCT CCAAGGCTAC CGGCTTCCCG
ATCGCCAAGA TCGCCGCCAA GCTGGCCATT GGTTACACCC TCGACGAGCT GCAGAACGAC
ATCACTGGCG GTCGCACCCC AGCGTCCTTC GAACCGTCGA TCGACTACGT CGTCACCAAG
CTGCCACGCT TCGCCTTCGA GAAATTCCCG AAAGCCGACG CCCGCCTGAC CACCCAGATG
AAATCCGTGG GTGAAGTCAT GGCCATCGGC CGTACTTTCC AGGAATCCCT GCAGAAAGCC
CTGCGCGGCC TGGAAGTCGG CGCCTGCGGC CTCGACCCGA AAGTCGACCT GGCCAGCCCG
GAAGCCGCCA GCATCCTCAA GCGTGAACTG ACCGTGCCGG GTGCCGAGCG TATCTGGTAC
GTGGCTGACG CCATGCGTTC GGGCATGACC TGCGAAGAAA TCTTCAATCT GACCGGCATC
GACATGTGGT TCCTGGTGCA GATGGAAGAC CTGATCAAGG AAGAAGAGAA GGTCAAGACC
CTGGCCCTGT CGGCAATCGA CAAGGACTAC ATGCTGCGCC TCAAGCGCAA GGGCTTCTCG
GACCAGCGCC TGGCAGTCCT GCTGGGCATC ACCGACAAGA ACCTGCGTCG CCACCGCCAC
AAGCTGGAAG TGTTCCCGGT GTACAAGCGC GTCGACACCT GCGCCGCCGA GTTCGCCACC
GACACCGCCT ACCTGTACTC CACCTACGAG GAAGAGTGCG AGGCCAACCC GTCGACCCGC
GACAAGATCA TGATCCTGGG TGGCGGCCCG AACCGTATCG GCCAAGGTAT CGAGTTCGAC
TACTGCTGCG TACACGCCGC CCTGGCGCTG CGTGACGACG GTTACGAGAC CATCATGGTC
AACTGCAACC CGGAAACCGT CTCCACCGAC TACGACACTT CCGACCGCCT GTACTTCGAG
CCGCTGACCC TGGAAGACGT GCTGGAAGTC TGCCGCGTCG AGAAGCCGAA GGGCGTGATC
GTTCACTACG GCGGCCAGAC CCCGCTGAAG CTGGCCCGCG CTCTGGAAGA AGCAGGCGTG
CCGATCATCG GTACCAGCCC TGACGCCATC GACCGCGCCG AAGACCGTGA GCGCTTCCAG
CAGATGGTTC AGCGCCTGAA CCTGCTGCAG CCGCCAAACG CCACCGTGCG CAGCGAAGAA
GAGGCTATCC GTGCTGCGGG CAGCATCGGC TACCCGCTGG TCGTGCGTCC GTCCTACGTA
CTGGGCGGCC GTGCCATGGA GATCGTCTAC GAGCTGGACG AGCTCAAGCG CTACCTGCGT
GAAGCGGTAC AAGTGTCGAA CGACAGCCCG GTACTGCTCG ACCACTTCCT CAACTGCGCC
ATCGAGATGG ACGTGGATGC GGTGTGCGAC GGCACCGACG TGGTCATCGG CGCGATCATG
CAGCACATCG AACAGGCCGG CGTACACTCC GGCGACTCGG CGTGCTCGCT GCCACCTTAC
TCGCTGAGCA AGGAAGTGCA GGACGAAGTC CGCGTTCAGG TCAAGAAAAT GGCGCTGGAG
CTGGGCGTGG TCGGCCTGAT GAACGTGCAG TTGGCCCTGC AGGGCGACAA GATCTACGTG
ATCGAAGTCA ACCCGCGTGC CTCGCGTACC GTACCGTTCG TGTCCAAGTG CATCGGCACG
TCCCTGGCGA TGATCGCGGC CCGTGTCATG GCGGGTAAAA CCCTGAAAGA GCTGGGCTTC
ACCCAGGAAA TCATCCCGAA CTTCTACAGC GTGAAGGAAG CCGTCTTCCC GTTCGCCAAG
TTCCCAGGGG TTGACCCGAT CCTCGGCCCT GAGATGAAAT CGACCGGTGA AGTCATGGGT
GTCGGTGACA GCTTCGGTGA AGCCTTCGCC AAAGCCCAGA TGGGTGCCAG TGAAGTGCTG
CCGACTGGCG GTACCGCGTT CATCAGCGTA CGCGACGACG ACAAGCCACA AGTGGCCGGC
GTTGCCCGCG ACCTGATCGC CCTAGGCTTC GAAGTGGTTG CCACTGCCGG CACCGCCAAG
GTTATCGAGG CGGCTGGCCT GAAAGTGCGC CGTGTGAACA AAGTGACCGA AGGTCGCCCG
CACGTGGTCG ACATGATCAA GAACGACGAA GTGTCGCTGA TCATCAATAC CACCGAAGGT
CGCCAGTCGA TCGCCGACTC CTACTCGATT CGTCGCAATG CGCTGCAGCA CAAGATTTAC
TGCACCACTA CCATTGCGGC TGGTGAAGCC ATCTGCGAAG CGCTGAAATT CGGTCCGGAA
AAGACCGTTC GTCGCTTGCA GGATCTGCAT GCAGGACTGA AAGCATGA
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| Protein sequence | MIGQACEFDY SGAQACKALR EEGFRVILVN SNPATIMTDP AMADATYIEP IKWQSVAKII
EKERPDAVLP TMGGQTALNC ALDLERHGVL EKFGVEMIGA NADTIDKAED RSRFDKAMKD
IGLECPRSGI AHSMEEANAV LEKLGFPCII RPSFTMGGTG GGIAYNREEF EEICTRGLDL
SPTKELLIDE SLIGWKEYEM EVVRDKKDNC IIVCSIENFD PMGVHTGDSI TVAPAQTLTD
KEYQIMRNAS LAVLREIGVE TGGSNVQFGI CPNTGRMVVI EMNPRVSRSS ALASKATGFP
IAKIAAKLAI GYTLDELQND ITGGRTPASF EPSIDYVVTK LPRFAFEKFP KADARLTTQM
KSVGEVMAIG RTFQESLQKA LRGLEVGACG LDPKVDLASP EAASILKREL TVPGAERIWY
VADAMRSGMT CEEIFNLTGI DMWFLVQMED LIKEEEKVKT LALSAIDKDY MLRLKRKGFS
DQRLAVLLGI TDKNLRRHRH KLEVFPVYKR VDTCAAEFAT DTAYLYSTYE EECEANPSTR
DKIMILGGGP NRIGQGIEFD YCCVHAALAL RDDGYETIMV NCNPETVSTD YDTSDRLYFE
PLTLEDVLEV CRVEKPKGVI VHYGGQTPLK LARALEEAGV PIIGTSPDAI DRAEDRERFQ
QMVQRLNLLQ PPNATVRSEE EAIRAAGSIG YPLVVRPSYV LGGRAMEIVY ELDELKRYLR
EAVQVSNDSP VLLDHFLNCA IEMDVDAVCD GTDVVIGAIM QHIEQAGVHS GDSACSLPPY
SLSKEVQDEV RVQVKKMALE LGVVGLMNVQ LALQGDKIYV IEVNPRASRT VPFVSKCIGT
SLAMIAARVM AGKTLKELGF TQEIIPNFYS VKEAVFPFAK FPGVDPILGP EMKSTGEVMG
VGDSFGEAFA KAQMGASEVL PTGGTAFISV RDDDKPQVAG VARDLIALGF EVVATAGTAK
VIEAAGLKVR RVNKVTEGRP HVVDMIKNDE VSLIINTTEG RQSIADSYSI RRNALQHKIY
CTTTIAAGEA ICEALKFGPE KTVRRLQDLH AGLKA
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