| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2232 |
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| Symbol | carB |
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| ID | 4957642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2438875 |
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| End bp | 2442114 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640181406 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001113570 |
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| Protein GI | 134300074 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.251597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAAA GAACAGACAT AAACAAGATT CTCATTATTG GGTCCGGTCC TATTATTATT
GGTCAGGCCT GTGAATTTGA CTATTCTGGA ACGCAAGCCT GCAAGGCCCT AAGAAATCTA
GGTTATCAGA TCGTTTTGGT TAATTCCAAT CCAGCTACAA TTATGACTGA CCCAGGAATT
GCAGATGCAA CCTACGTGGA GCCTCTAAAC GTCAAAAGTC TTACCGAAAT CATCGTAAAG
GAAAGACCGG ATGCTGTTCT GCCAAATTTA GGTGGACAGA CAGCCCTTAA CCTTTGCTCA
GAGCTTAACC AAAGTGGTAT CTTAAATCAA TATGGAGTTA AAGTTATTGG TGTTCAGATA
GACGCCATAG AACGTGGCGA GGACCGTATT GCCTTTAAAG AAACCATGAG TAGACTTGGT
ATCGAAATGC CTCGTAGCCA AGCAGCCTAT AGTGTTGAGG AGGCTGAAAA AATAGCCCAA
GAGCTTGGCT ATCCGGTTGT TATCAGACCC GCCTATACTA TGGGTGGTAC CGGAGGGGGT
CTTGTCTATA ATGTCGAAGA GCTTAGGACC ATTGCTAATC GCGGTATCGC TTCCAGCATG
GTAGGACAAA TTCTAGTTGA AGAATCCGTA CTCGGTTGGG AGGAACTTGA GCTTGAGGTT
GTAAGAGACA GTAAAAACCA GATGATTACT GTTTGTTTTA TCGAAAATAT TGATGCAGTG
GGGGTACATA CCGGTGACTC CTTCTGTGCT GCCCCTATGC TTACCATCAG CCAGGAACTG
CAGCAGCGAT TACAAAAGTA CTCCTATGCA GTTGTGGAAG CCATAGAGGT TATTGGGGGC
ACCAATGTTC AGTTCGCCCA TGATCCTAAA ACAGGCAGGG TTGTCATTAT CGAAATAAAC
CCACGTACTT CCCGTTCCTC GGCACTGGCT TCCAAGGCTA CTGGCTTCCC GATCGCTTAT
GTATCTGCCC TACTTGCGGC TGGTCTTACA CTTGATGAAA TTCCTTACTG GAGGGATGGA
AGTCTAGAAA AATACACTCC TTCAGGAGAT TATGTGGTTA TTAAATTTGC CCGCTGGGCC
TTTGAAAAGT TCCCTGGTGC CCAGGACAAA CTAGGGACTC AGATGCGTGC AGTTGGCGAG
GTTATGAGCA TTGGTAAAAA CTATAAGGAA GCTTTACAAA AGGCCATTCG TTCGCTGGAA
ATCAATCGTT ACGGCTTGGG TTTCGCTAAG AATTTTAACC AGTATTCCCT TGATGAATTG
CTCTCCATGC TTACTGAACC CACCAGTGAG CGCCAGTTTA TCATGTATGA GGCCCTGCGT
AAGGGTGCTC CAGTGGATCA GCTATATAAG ATGACCCATA TTAAACCATA TTTTATTGAG
CAAATGAAAG AGCTTGTTCT TCTGGAAGAG GAAATACTAA AGTATAAGGG TGGTAAAGTT
CCGAATGATC TGTTAATAAA GGCTAAAAAA GATGGTTTTG CTGACCGTTA TTTAGCAATG
CTTTTAAACT TAGCTGAAGC AGAAATCCGT AAGGCAAGAG CTGGTTTGGG TATTGTAGAG
GGCTGGGAAG CAGTTCCTGT AAGCGGGGTT GAAAATGCAT CCTACTATTT TTCAACCTAC
AACGCTCCAG ATAAAACTTC AGTAAGCGAC AAGCCAAAGG TGATGATTCT TGGAGGAGGT
CCTAACAGAA TTGGTCAGGG AATTGAGTTT GACTACTGCT GTGTTCATAC AGCCTTTGCT
CTAAAAGAGC TAGGCTATGA AACAGTTATG GTTAACTGCA ATCCGGAAAC TGTTTCCACT
GACTATGATA CATCTGATAA GCTGTACTTT GAACCACTTA CAGTGGAAGA TGTTTTAAGC
ATTTATCAGA AGGAAAAGCC ACTGGGTGTA ATCGTTCAGT TTGGTGGTCA GACTCCCCTC
AATATTGCAA GGGAACTCGA ACAGGCCGGT GTAAAAATCC TTGGAACTTC CCAAGAAACC
ATTGACTTGG CGGAGGACCG TGATAGGTTC AACAGCATGA TGCAGAAGCT GGGTATTCCC
ATGCCGGAGT CAGGTATGGC AGTCAATATC GAGGAAGCCA TTGACATCTC TAAGAAAATT
GGTTATCCAT TAATGGTTCG TCCGTCCTAT GTTTTGGGTG GCCGGGGTAT GGAAATCGTA
CATGATGAGG ATATGCTCCG CAGGTATATG GCAGCTGCAG TAGGAGTTAC TCCTGAAAGA
CCAATTCTTG TAGATAGGTT CCTGGGACAT GCCATTGAAG CAGAGGCGGA CGCAATTTCC
GATGGGAAAG ATGCCTTTGT TCCGACAGTC ATGGAGCATA TTGAATATGC TGGTGTTCAC
TCAGGAGATT CAGCCTGTGT AATTCCACCC GTAAGTATAT CAGAGGAACA CCTTAACACC
ATTGTGGATT ATACCAAGAA GATTGCTAAA GAAATGCAGG TTGTCGGCCT TATGAATATG
CAGTATGCAA TAGCCGACGA CAGGGTTTAT GTGTTGGAAG CCAATCCAAG AGCATCCAGA
ACGGTTCCTC TTGTCTCAAA GGTATGCAAT ATCCCCATGG CTCGCATAGC AACAGAAATA
ATCATGGCTG ACTACGCCGG AAAAAAATAC CCCATGGGTA GCCTTATTAA TAAAAAAATC
CCCCATTATG GGGTGAAAGA AGCAGTTCTA CCCTTTAATA TGTTCCCTGA GGTGGACCCG
GTTTTAGGTC CGGAAATGCG CTCCACTGGA GAAGTATTGG GAATGGCAGA TTCTTTCGAG
CTTGCATACT ATAAGGCTCA GGAAGCAACA CAGGTGTCAC TGCCTACCTC GGGAACTGTG
CTTATTAGCG TAAACGATAA TGATAAATCT GATGTTCTTG AGGCAGCAAG GGAATTTTCA
AAAATCGGCT TTAAAATCAG AGCAACAGAA GGAACCTGCA AATTCCTTGA GATAAATGGA
GTCGACTGTG AGAAGATTAA AAAGGTCTTT GAAGGACGTC CCAATATAGC AGATAGCATT
GCAAATAAGG AAATAAATCT TATAATCAAC ACACCACGGA CTAAACTCAG TGAACTTGAT
GATTCCTATA TCCGTAAAAT AGCCATCAAG CATAAGGTTC CATATATCAC CACCATGACT
GCAGCCTTGG CAAGTGCAAA GGGTATTGCA GCCTATATAG AAAATAGTTT GTCAGAGTCT
AAGAAAAAAT CCTTACAAGA ATATCACTCA GATATTACTA CACTAAATAT CCCAGGCTAG
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| Protein sequence | MPKRTDINKI LIIGSGPIII GQACEFDYSG TQACKALRNL GYQIVLVNSN PATIMTDPGI
ADATYVEPLN VKSLTEIIVK ERPDAVLPNL GGQTALNLCS ELNQSGILNQ YGVKVIGVQI
DAIERGEDRI AFKETMSRLG IEMPRSQAAY SVEEAEKIAQ ELGYPVVIRP AYTMGGTGGG
LVYNVEELRT IANRGIASSM VGQILVEESV LGWEELELEV VRDSKNQMIT VCFIENIDAV
GVHTGDSFCA APMLTISQEL QQRLQKYSYA VVEAIEVIGG TNVQFAHDPK TGRVVIIEIN
PRTSRSSALA SKATGFPIAY VSALLAAGLT LDEIPYWRDG SLEKYTPSGD YVVIKFARWA
FEKFPGAQDK LGTQMRAVGE VMSIGKNYKE ALQKAIRSLE INRYGLGFAK NFNQYSLDEL
LSMLTEPTSE RQFIMYEALR KGAPVDQLYK MTHIKPYFIE QMKELVLLEE EILKYKGGKV
PNDLLIKAKK DGFADRYLAM LLNLAEAEIR KARAGLGIVE GWEAVPVSGV ENASYYFSTY
NAPDKTSVSD KPKVMILGGG PNRIGQGIEF DYCCVHTAFA LKELGYETVM VNCNPETVST
DYDTSDKLYF EPLTVEDVLS IYQKEKPLGV IVQFGGQTPL NIARELEQAG VKILGTSQET
IDLAEDRDRF NSMMQKLGIP MPESGMAVNI EEAIDISKKI GYPLMVRPSY VLGGRGMEIV
HDEDMLRRYM AAAVGVTPER PILVDRFLGH AIEAEADAIS DGKDAFVPTV MEHIEYAGVH
SGDSACVIPP VSISEEHLNT IVDYTKKIAK EMQVVGLMNM QYAIADDRVY VLEANPRASR
TVPLVSKVCN IPMARIATEI IMADYAGKKY PMGSLINKKI PHYGVKEAVL PFNMFPEVDP
VLGPEMRSTG EVLGMADSFE LAYYKAQEAT QVSLPTSGTV LISVNDNDKS DVLEAAREFS
KIGFKIRATE GTCKFLEING VDCEKIKKVF EGRPNIADSI ANKEINLIIN TPRTKLSELD
DSYIRKIAIK HKVPYITTMT AALASAKGIA AYIENSLSES KKKSLQEYHS DITTLNIPG
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