| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0711 |
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| Symbol | carB |
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| ID | 3775882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 701604 |
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| End bp | 704897 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799124 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_399730 |
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| Protein GI | 81299522 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCC GCCAAGATAT TCGCAAAATT CTGCTGCTCG GATCCGGGCC AATCGTTATT
GGACAGGCGT GCGAGTTTGA TTACTCGGGC ACCCAAGCTT GCAAGGCGCT GCGCGAGGAA
GGCTACGAGG TGGTGTTGGT CAATTCAAAC CCCGCCACGA TCATGACCGA CCCCGAGACG
GCCGATCGCA CCTACATTGA GCCGCTGACG CCAGAATTGG TCGCTCAGGT GATCGAGCGG
GAGCGTCCCG ATGCCCTGCT GCCGACGATG GGTGGTCAGA CCGCTTTGAA CTTGGCTGTC
GCGCTTGCCA AAAACGGTAC CCTCGATCGC TTTGGGGTGG AGCTGATCGG CGCGAAGTTA
GAGGCGATCG AAAAAGCTGA AGACCGACTC CTGTTCAAAG AGGCCATGGA GCGGATCGGC
GTCAAAGTTT GTCCCAGCGG CATCGCCAAC AATATGGCCG AGGCCCAGGC GATCGCCGAA
CAGATTGGCA CCTATCCGCT GATCATTCGT CCGGCCTTCA CCATGGGTGG CACCGGTGGC
GGCATTGCCT ACAACCAAGA AGAGTTTGAG CTGATCGTCC AGTCGGGCTT GGATGCCAGC
CCTGTCAGCC AAATTCTGGT CGAACAGTCG CTGATTGGCT GGAAGGAATT TGAGCTGGAG
GTGATGCGCG ACCTCGCCGA CAACGTTGTG ATCATCTGCT CGATCGAAAA CCTCGACCCG
ATGGGCGTTC ATACCGGCGA CTCGATCACC GTGGCCCCAG CACAAACCCT GACCGATAAG
GAATATCAGC GCCTACGGGA CCAAGCGATC GCAATCATCC GTGAGATTGG GGTGGAAACC
GGCGGCTCCA ACATCCAGTT CGCGATCAAT CCCCAAGATG GCGACGTGAT CGTGATCGAG
ATGAACCCGC GGGTCTCGCG CAGTTCAGCG CTGGCTTCCA AAGCAACGGG TTTCCCGATC
GCCAAAATCG CCGCCAAACT GGCGGTCGGC TACAGCTTGG ATGAACTGAA GAACGACATC
ACCCGCCAGA CACCGGCCTC CTTTGAACCG ACGATCGACT ACGTCGTTAC CAAGATTCCG
CGCTTTGCCT TCGAGAAATT CCCTGGCACT CCCGCCCAAC TGACCACGAT GATGAAATCG
GTGGGTGAGG CGATGGCGAT CGGGCGAACC TTTCCCGAGT CGTTCCAAAA AGCGCTGCGA
TCGCTAGAAA TTGGTCGTTC CGGTTGGGGC TGCGATCGCC CCGAAACCCT GCCGACGCTG
GAGCAAATCA AACCGCAGTT GCGCACGCCC AGCCCCGATC GCATTTTTGC GGTACGGCAG
GCGATGCTGC TTGGCCTCAG CGATGGCGAT ATCTATCAGC TGACCGGCAT CGATCCCTGG
TTCCTTGAGA AGTTCCGCGA AATTCTGGAA GGTGAGGACT TCCTGAAGCG CGCCTCAATT
GAGCAAATCA CGCCGGCGCA GTGGCTAGAA GTGAAGCAGC TTGGCTTTAG CGATCGCCAG
ATTGCCTTTG CCCTTGGTAG CTCGGAAGAA GCGGTGCGTC AGCGGCGGCA GCAACAGGGC
ATCAAACCGG TTTACAAGCT AGTCGATACC TGTGCGGCCG AGTTCGAGGC CTACACGCCC
TATTACTACT CCTGCTATGA ATCGCCGCGA TCGCACTTGG CTGAGTCGGG CCTGACGACC
ATCCCGGCAG AGTCGGAAGT GCGGCCTAGC GATCGCCCCA AAGTGATGAT TCTGGGCGGT
GGCCCCAACC GCATTGGTCA GGGCATCGAG TTCGACTACT GCTGCTGTCA TGCGGCTTTT
GCGCTGGCAG CGGATGGCTA CGAAACGATC ATGGTCAACT CCAACCCCGA GACGGTTTCG
ACTGACTACG ACACCAGCGA TCGCCTCTAC TTTGAGCCGC TGACTCGCGA GGATGTGCTG
AACATTCTGG AGGCCGAGCG GCCCCAGGGC GTAATCATCC AATTTGGCGG CCAAACGCCG
CTGAAGCTGG CGGTACCGCT GCAAACTTTC CTGCAAACGC CAGAAGGCCA AGCCCTTGGT
ACCCAGATTT GGGGTACTTC GCCAGACTCG ATCGATACGG CGGAAGACCG CGAACGCTTT
GAGCAAATCC TGCGCCAGCT CGATATTGCT CAGCCCGCCA ATGGTCTGGC CCGCAGTCCT
GAAGAGGCCT TAGCGATCGC TCATCGCATT GGCTACCCGA CGGTGGTGCG CCCCAGCTAC
GTTTTGGGCG GCCGAGCCAT GGAAATCGTC TATTCTGACG CCGAGCTAGA GCGCTACATG
ACCGAAGCCG TGCAGGTCGA GCCGGATCAC CCGATTTTGA TCGACAAGTT CCTCGAAAAC
GCGATCGAAG TCGACGTGGA TGCCCTCGCT GATCGCACTG GTCAAGTTGT GATCGGCGGG
ATCATGGAGC ACATTGAGCA GGCTGGGATT CACTCCGGCG ATAGCGCCTG TTCGCTGCCC
ACGGTCAGCC TCAATGAGAC GGTGCTGGAA ACAATCCGCG CTTGGACAAC CCAACTGGCG
AAAGCACTCA ACGTCATTGG CCTGATGAAC ATTCAGTTCG CGGTCAAAGA TGAGCAGGTC
TATATTCTCG AAGCCAACCC CCGCGCCTCG CGGACGGTGC CCTTTGTCTC CAAGGCGATC
GGGCGTCCAC TCGCCAAAAT TGCAGCGCGG CTGATGTCCG GTCAAACCTT GGCGGATCTC
GGCATCACTT CTGAGTTAGT GCCCAGCTAC CTTTCGGTTA AGGAGGCAGT GCTGCCCTTC
GATCGCTTCC CCGGGACGGA TACTCTCTTG GGGCCTGAAA TGCGCTCTAC TGGCGAGGTG
ATGGGCATTG ATGTGGACTT TGGTCGCGCC TTTGCTAAAG CGGAGCTAGC AGCCTCCCAG
CGACTACCGC GCCAAGGCAC GGTCTTTATC TCCGTCAGCG ATCGCGATAA AGCTGCGATC
GGGCCAATTG CTCGGGAATT CCTACAGTTG GGCTTCCGAG TGGTTGCAAC GGGTGGCACT
CAAAAAGTGT TGGCAGAGCA GCGACTCTCC GTTGAGCCGA TTCTCAAAGT GCATGAGGGT
CGTCCTCACG TTCTGGATGC ACTCAAGAAC GATCAGATTC AGCTGATCAT CAATACGCCC
GCCGGCGCTC GCGCCAAAGT GGACGACCAA ATCATTCGCC GGGCAGCACT GGATTACAAA
GTGCCAACTG TCACCACGAT CGCGGGGGCG AAAGCTACTG TTGAAGCGAT TCGTGCCTTG
CTAGAGCAAC CGCTGCAAGT GAAATCCTTA CAGGACTATC AACAGCAAGG CTAG
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| Protein sequence | MPRRQDIRKI LLLGSGPIVI GQACEFDYSG TQACKALREE GYEVVLVNSN PATIMTDPET
ADRTYIEPLT PELVAQVIER ERPDALLPTM GGQTALNLAV ALAKNGTLDR FGVELIGAKL
EAIEKAEDRL LFKEAMERIG VKVCPSGIAN NMAEAQAIAE QIGTYPLIIR PAFTMGGTGG
GIAYNQEEFE LIVQSGLDAS PVSQILVEQS LIGWKEFELE VMRDLADNVV IICSIENLDP
MGVHTGDSIT VAPAQTLTDK EYQRLRDQAI AIIREIGVET GGSNIQFAIN PQDGDVIVIE
MNPRVSRSSA LASKATGFPI AKIAAKLAVG YSLDELKNDI TRQTPASFEP TIDYVVTKIP
RFAFEKFPGT PAQLTTMMKS VGEAMAIGRT FPESFQKALR SLEIGRSGWG CDRPETLPTL
EQIKPQLRTP SPDRIFAVRQ AMLLGLSDGD IYQLTGIDPW FLEKFREILE GEDFLKRASI
EQITPAQWLE VKQLGFSDRQ IAFALGSSEE AVRQRRQQQG IKPVYKLVDT CAAEFEAYTP
YYYSCYESPR SHLAESGLTT IPAESEVRPS DRPKVMILGG GPNRIGQGIE FDYCCCHAAF
ALAADGYETI MVNSNPETVS TDYDTSDRLY FEPLTREDVL NILEAERPQG VIIQFGGQTP
LKLAVPLQTF LQTPEGQALG TQIWGTSPDS IDTAEDRERF EQILRQLDIA QPANGLARSP
EEALAIAHRI GYPTVVRPSY VLGGRAMEIV YSDAELERYM TEAVQVEPDH PILIDKFLEN
AIEVDVDALA DRTGQVVIGG IMEHIEQAGI HSGDSACSLP TVSLNETVLE TIRAWTTQLA
KALNVIGLMN IQFAVKDEQV YILEANPRAS RTVPFVSKAI GRPLAKIAAR LMSGQTLADL
GITSELVPSY LSVKEAVLPF DRFPGTDTLL GPEMRSTGEV MGIDVDFGRA FAKAELAASQ
RLPRQGTVFI SVSDRDKAAI GPIAREFLQL GFRVVATGGT QKVLAEQRLS VEPILKVHEG
RPHVLDALKN DQIQLIINTP AGARAKVDDQ IIRRAALDYK VPTVTTIAGA KATVEAIRAL
LEQPLQVKSL QDYQQQG
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