| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0911 |
|---|
| Symbol | carB |
|---|
| ID | 5162587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1004895 |
|---|
| End bp | 1008140 |
|---|
| Gene Length | 3246 bp |
|---|
| Protein Length | 1081 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640552827 |
|---|
| Product | carbamoyl phosphate synthase large subunit |
|---|
| Protein accession | YP_001234049 |
|---|
| Protein GI | 148259922 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
|---|
| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAAC GCACAGACAT CAAATCGATC CTGATCATCG GCGCCGGGCC CATCGTCATC
GGCCAGGCCT GCGAGTTCGA CTATTCCGGT GCCCAGGCCT GCAAGGCGCT GCGCGAGGAG
GGCTACCGGG TGATCCTGGT GAACTCCAAT CCCGCCACGA TCATGACCGA TCCCGAACTG
GCGGATGCCA CCTATATCGA GCCGATCACG CCGGAGATGG TCGAGAAGAT CATCATCAAG
GAACGGCCGG ATGCGGTGCT GCCCACCATG GGCGGGCAGA CGGCGCTGAA CACCGCGATG
GCGCTCGCCA AGGCCGGCAC GCTGGAGAAG CACGGCGTCG AGCTGATCGG CGCCCGCGCC
GAGGTGATCG ACCGCGCCGA GGACCGCCTG AAATTCCGCG ATGCGATGGC CGAGATCGGC
ATCGAAAGCC CGCGCAGCGC CATCGCCCAT ACGATGGACG AGGCGCGCGC AGCACTCGAC
CTGGTTGGCC TGCCGGCGGT GATCCGCCCC TCCTTCACCC TCGGCGGCAC CGGCGGCGGC
ATCGCCTACA ATCGCGAGGA ATTCCTCGAA ATCGTCGCCG GCGGGCTCGA CGCCTCGCCG
ACCACCGAGG TGCTGATCGA GGAAAGCGTG CTCGGCTGGA AGGAATACGA GATGGAGGTG
GTCCGCGACC AGGCGGACAA CTGCATCATC GTCTGCTCGA TCGAGAACAT CGACCCGATG
GGCGTGCACA CCGGCGACTC CGTCACGGTC GCCCCCGCGC TGACCCTGAC CGACCGCGAA
TACCAGCTGA TGCGCGACGC CTCGATCGCC TGTCTGCGCA AGATCGGCGT CGATACCGGC
GGTTCGAACG TGCAGTTCGG CATCAATCCG GCCGACGGGC GCATGGTCAT CATCGAGATG
AACCCCCGCG TCTCCCGCTC CTCGGCGCTG GCTTCGAAGG CGACCGGCTT TCCCATCGCC
AAGATCGCGG CGAAGCTCGC CGTCGGCTAC ACGCTCGACG AGCTGCGCAA CGACATCACC
CGAGTCACCC CGGCGAGCTT CGAGCCGACG ATCGACTACG TCGTCATCAA GATCCCGCGC
TTCACCTTCG AGAAGTTCCC CGGCACGCCG GCGCTGCTGA CCACCTCGAT GAAGTCGGTC
GGCGAGGCGA TGGCGATCGG CCGCTCCTTC CCCGAGGCGC TGCAAAAGGG GCTGCGCAGC
CTGGAGACCG GCCTCGCCGG GCTCGATCCG GTCGAGAAGC CGGGTGACGG CACGCGCGAT
GCCTTCCGCG CCGCGCTCTC CACCCCGCGA CCCGACCGGC TGCTGATCGC CGCCGAGGCG
CTGCGCGCCG GCCTCTCGGT CGAGGAAATC CACGCCGCCT GCAAGTTCGA CCCCTGGTTC
CTCCGCCAGA TGGAGGACAT CGTCGAGGCC GAACGCCGCG TCGCCGCGGA GGGCCTGCCC
GGCGACGAGC TCGGCATGCG CGCGCTCAAG GCGCTGGGGT TCTCCGACCG CCGCCTCGCC
GCCCTTACCG GCCGGAGTGA GGCTGATGTG AGCAAGGCGC GCCTCGCCCT CGGCGTCACC
CCGGTCTATC GCCGGATCGA CAGCACCGGC GGCGAATTCG CCTCGGCGAC CTCTTATATG
TTCGCGACCT ATGAAGGCGG CTTCGGCGCG CCGGTCTGCG AGGCGGAGCC GAGCGAGCGG
CGCAAGGTCG TCATTCTCGG CGGCGGCCCG AACCGGATCG GCCAGGGCAT CGAGTTCGAC
TATTGCTGCG TCCACGCCGC CTATGCGCTG CGCGAGGCGG GGTTCGAGAC CATCATGGTC
AACTGCAACC CCGAAACCGT CTCGACCGAC TACGACACCT CCGACCGCCT CTATTTCGAG
CCTCTCTTCG CCGAGGACGT GCTCTCCCTG CTCCGCCGCG AGCAGGAGCG CGGCACGCTG
CTCGGCTGCA TCGTGCAGTA TGGCGGGCAG ACGCCGCTCA AGCTCAGCCA GGCCCTCGCC
GAGGCCGGCA TCCCGATCCT CGGCACCTCG GCCGACGCGA TCGATGCCGC GGAGGACCGC
GAGCGCTTCC ACGACCTGCT GCGCTCGCTC GGCCTGCGCC AGCCGGAAAA CGGGCTGGCC
CGCTCGGCCG AGCAGGCGGA AGCGATCGTC GAGCGGATCG GCTTCCCCGT CGTCATCCGC
CCCTCCTACG TGCTCGGCGG CCGGGCGATG GAAATCGTCT ACGACCTCGC CAGCCTGCGC
CGCTACATGC GCGAGGCGGT GGTGGTCTCC GGCACCAACC CGGTGCTGAT CGACCGCTAC
CTGAACGATG CGATCGAGGT CGATGTCGAC TGCATCGCGG ACGGCCAGAG CGTCTACGTC
GCCGGCGTGA TGGAGCATAT CGAGGAGGCC GGCATCCATT CCGGCGACTC CGCCTGCTCG
CTGCCGCCCT ATTCGCTCTC GCCCGCCATC GTCGCCGAAC TGCGCGCCGA GACCGAGGCG
ATGGCGAAGG CGCTCAATGT TATCGGGCTG ATGAACGTGC AGTTCGCGAT CCAGGGCGAG
AACGTCTACG TGCTGGAGGT CAATCCGCGC GCCTCGCGCA CCGTGCCCTT CGTCGCCAAG
GCGACCGGCG TACCGGTGGC GAAGATCGGC GCGCGGGTGA TGGCCGGCGA GGCGCTGGCC
TCCTTCGGGC TGGACGACAG CGTGATGCGC AGTCACGTTG CGGTGAAGGA AGCGGTGTTC
CCCTTCGCCC GCTTCTCCGG CGTCGACGTG CTGCTGGGCC CCGAGATGAA GTCCACCGGC
GAGGTGATGG GGCTGGATGT CAGCTTCGCC CGCGCCTTCG CCAAGGCCCA GCTCGGCGCC
GGGGTGAAGC TGCCGCAGGC GGGCACGGTG TTCCTCTCGG TGCGGGATTC CGACAAGCCG
GCGATCCTCG CGATCGCCCG CCGCTTCGTC GATCTCGGCT TCGAGATCAT GGCGACCCGT
GGCACCGCCG CGCATCTTTC CGAAGCCGGC ATCGCCGCGC GGGCGGTGAA CAAGGTGCTG
GAGGGCCGGC CGCACTGCGT CGACTCGATC CGCTCCGGCG AGGTTCAGCT GGTGATCAAC
ACCGCCTCCG GCGCGCAGAC CGTGGCGGAC AGTTTCGACA TCCGCCGCCA GGCGCTGAAC
CACGGCGTGC CGCACTACAC GACCATCGCC GGCGCGCGGG CGGCCTCGCA CGCCATCGCC
GCCCTTGCCG CGGGCAGCCT TGAAGTCGCG CCGCTTCAGT CGTATTTTCC GCAATCGTTC
CGATGA
|
|---|
| Protein sequence | MPKRTDIKSI LIIGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEL
ADATYIEPIT PEMVEKIIIK ERPDAVLPTM GGQTALNTAM ALAKAGTLEK HGVELIGARA
EVIDRAEDRL KFRDAMAEIG IESPRSAIAH TMDEARAALD LVGLPAVIRP SFTLGGTGGG
IAYNREEFLE IVAGGLDASP TTEVLIEESV LGWKEYEMEV VRDQADNCII VCSIENIDPM
GVHTGDSVTV APALTLTDRE YQLMRDASIA CLRKIGVDTG GSNVQFGINP ADGRMVIIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELRNDIT RVTPASFEPT IDYVVIKIPR
FTFEKFPGTP ALLTTSMKSV GEAMAIGRSF PEALQKGLRS LETGLAGLDP VEKPGDGTRD
AFRAALSTPR PDRLLIAAEA LRAGLSVEEI HAACKFDPWF LRQMEDIVEA ERRVAAEGLP
GDELGMRALK ALGFSDRRLA ALTGRSEADV SKARLALGVT PVYRRIDSTG GEFASATSYM
FATYEGGFGA PVCEAEPSER RKVVILGGGP NRIGQGIEFD YCCVHAAYAL REAGFETIMV
NCNPETVSTD YDTSDRLYFE PLFAEDVLSL LRREQERGTL LGCIVQYGGQ TPLKLSQALA
EAGIPILGTS ADAIDAAEDR ERFHDLLRSL GLRQPENGLA RSAEQAEAIV ERIGFPVVIR
PSYVLGGRAM EIVYDLASLR RYMREAVVVS GTNPVLIDRY LNDAIEVDVD CIADGQSVYV
AGVMEHIEEA GIHSGDSACS LPPYSLSPAI VAELRAETEA MAKALNVIGL MNVQFAIQGE
NVYVLEVNPR ASRTVPFVAK ATGVPVAKIG ARVMAGEALA SFGLDDSVMR SHVAVKEAVF
PFARFSGVDV LLGPEMKSTG EVMGLDVSFA RAFAKAQLGA GVKLPQAGTV FLSVRDSDKP
AILAIARRFV DLGFEIMATR GTAAHLSEAG IAARAVNKVL EGRPHCVDSI RSGEVQLVIN
TASGAQTVAD SFDIRRQALN HGVPHYTTIA GARAASHAIA ALAAGSLEVA PLQSYFPQSF
R
|
|---|
| |