| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1088 |
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| Symbol | |
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| ID | 5835011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1185385 |
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| End bp | 1188858 |
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| Gene Length | 3474 bp |
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| Protein Length | 1157 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641366883 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001638563 |
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| Protein GI | 163850520 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.464939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAC GCACCGACAT CTCCTCCATT CTCATCATCG GTGCGGGCCC CATCATCATC
GGGCAGGCCT GCGAATTCGA TTATTCCGGC ACGCAGGCCT GCAAGGCTCT GCGGGAAGAG
GGCTACCGGA TCGTTCTGGT GAACTCGAAC CCGGCGACGA TCATGACCGA CCCGGACATG
GCCGACGCCA CCTATGTCGA GCCGATCACG CCGGAGATCG TCGCCAAGAT CATCGAGAAG
GAGCGGCCCG ACGCGCTGCT GCCCACCATG GGCGGACAGA CGGCGCTCAA CTGTGCGCTC
TCGCTGAAGC GCATGGGCGT GCTCGAAAAG TTCGGCGTGC AGATGATCGG CGCGACGGCT
GAAGCCATCG ACAAGGCGGA GGACCGCAAC CTCTTCCGTG ACGCGATGAC CAAGATCGGC
CTGGAGACGC CGAAATCCGC GCTCGCCAAC GCCTCGGCTG CCAAGAAGGC CGACCGCGAC
CGCTATCTCG CCGAGAAGGC GCGCATCGAG GCGGCGCAGT CGGATCCGGC CGTCCGCGCG
ACGGCGCTCG CCGAATTCGA TCGGCAGTGG AGCGGCGGCG AGGGCGACCG GCGGCGGCGC
TACATCGAGC ACGCGCTGGG TCAGGCGCTG ATCGCGCTCG CCGAAGTCGG CCTGCCGGCG
ATCATCCGCC CCTCCTTCAC CATGGGCGGC ACCGGCGGCG GCATCGCCTA CAACCGCGAG
GAATTCCTCG AGATCGTCGA GCGCGGCATC GACGCCTCGC CGACCAACGA GGTGCTGATC
GAGGAGAGCG TGCTCGGCTG GAAGGAGTAC GAGATGGAAG TCGTCCGCGA TAAGGCGGAT
AACTGCATCA TCGTCTGCTC CATCGAGAAC GTCGATCCGA TGGGCGTCCA CACGGGCGAC
TCGATCACCG TCGCGCCGGC ACTGACCCTC ACCGATAAAG AATATCAGGT GATGCGCGAC
GCCTCGCTCG CCGTGCTGCG CGAGATCGGC GTCGAGACCG GCGGCTCGAA CGTGCAGTTC
GCGATCGACC CGAAGACGGG CCGGATGATC GTGATCGAGA TGAACCCGCG CGTGTCGCGC
TCCTCGGCGC TGGCCTCGAA GGCCACCGGC TTCCCGATCG CCAAGGTCGC GGCCAAGCTC
GCCGTCGGCT ACACGCTGGA CGAGATCGCC AACGACATCA CCGGCGGCGC GACCCCGGCC
TCGTTCGAGC CGACGATCGA CTACGTCGTC ACCAAAATTC CTCGGTTTGC GTTCGAAAAA
TTCCCCGGCG CCGAGCCGAC GCTGACCACC GCGATGAAGT CGGTGGGTGA GGCCATGGCG
ATCGGCCGCT GCTTCGCGGA ATCCCTGCAG AAGGCCCTGC GCTCGCTGGA GACGGGGCTG
ACCGGCCTCG ACGAGATCGA GATTGAGGGT CTCGGCAAGG GCGACGACCA CAACGCGATC
AAGGCCGCGC TCGGCACGCC GACGCCGGAC CGGCTGCTCA AGGTCGCGCA GGCGATGCGC
CTCGGGATCA GCCACGAGGA GATCTACGCC TCCTGCGCGA TCGATCCGTG GTTCCTGGAG
CAGCTCCAGG CCATCGTCGA TCTGGAGAAC CGGGTAAAGG CGCATGGCCT GCCCAAGACC
CCGGGCGCCT TCCGCCAGCT CAAGGCCGCC GGCTTCTCCG ACGCGCGGCT GGCCGTGCTG
ACCGACACCG ACGAGGACGC CGTGCGCGCC GCCCGCCGGG GCTTGGGCGT GCGTCCGGTC
TTCAAGCGGA TCGACACCTG CGCCGCCGAG TTCAAGGCGC CGACCGCCTA CATGTACTCG
ACCTACGTCG CCCCCTTCGC CGGCCAGACC TCGGACGAGG CGTACCCGTC GGACAAGAAG
AAGGTCATCA TCCTCGGCGG CGGCCCGAAC CGGATCGGCC AGGGCATCGA GTTCGACTAT
TGCTGCTGCC ATGCCTGCTT CGCGCTGACC GAGGCCGGCT ACGAGACCAT CATGGTCAAC
TGCAACCCGG AGACGGTCTC GACCGACTAC GACACCTCCG ACCGGCTCTA TTTCGAGCCG
CTCACCGAAG AGGATGTCCT GGAGATCGTC GAGACCGAGC GGCAGGCGGG CACGCTCCAC
GGCGTGATCG TGCAGTTCGG CGGCCAGACC CCGCTCAAGC TCGCGCGCGC CCTCGAGGCC
GCCGGCGTGC CGATCCTCGG CACCTCGCCC GACGCCATCG ACCTCGCCGA GGACCGCGAC
CAGTTCAAGC GCCTGCTGGA CAAGCTCGGC CTCAAGCAGC CCAAGAACGG CATCGCCTAC
TCGGTGGAGC AGAGCCGGCT CGTCGCCGCC GAACTCGGCC TGCCCTTCGT GGTGCGCCCG
AGCTACGTGC TCGGCGGGCG GGCCATGGCG ATCATCCATG ACGAGGCGCA GTTCGCCGAG
TACCTGCTCG GCACGCTGCC GAGCCTGATC CCCTCCGACA TCAAGGCACG CTACCCCAAC
GACAAGACGG GGCAGATCAA CACGGTGCTG GGCAAGAACC CGCTCCTGTT CGACCGCTAC
CTGTCGGACG CGACCGAGGT CGATGTCGAT GCGGTCTGCG ACGGGCAGAG CGTGTTCATC
GCCGGCATCA TGGAGCACAT CGAGGAGGCG GGCATCCATT CCGGGGACAG CGCCTGCTCG
CTGCCGCCGC GCACGCTCTC GCCCGAGATC CTCGCCGAGT TGGAGCGGCA GACGAAGGCG
ATGGCGCTGG CTCTCAAGGT CGGCGGCCTG ATGAACGTGC AATACGCGAT CAAAGACGGC
GCGATCTACG TGCTGGAGGT GAACCCGCGC GCCTCGCGCA CGGTGCCCTT CGTCGCCAAG
GTGATCGGCG AGCCGATCGC CAAGATCGCC GCGCGGATCA TGGCCGGCGA GCGCCTCGAC
AGCTTCGGCC TCAAGCCGAA GCGGCTCGAC CACATCGCGG TGAAGGAGGC AGTGTTCCCC
TTCGCCCGCT TCCCCGGCGT CGACGTGCTG CTCGGACCGG AGATGCGCTC GACCGGCGAG
GTGATCGGGC TCGATGCTGG CTTCGGCGTG GCCTTCGCCA AGAGCCAGCT CGGATCGGGC
ACGGCGGTGC CGCGCACCGG CACGGTGTTC GTCTCCGTAC GTGACGACGA CAAGCCCCGC
GTGTTGCCGG CGATCCGGCA ACTCGCCGGC CTCGGCTTCA CCATCCTGGC GACCGGCGGC
ACGCAGCGCT ACCTGGCGGA CGAGGGCATT CCGACCCAGC GCATCAACAA GGTGCTGGAG
GGCCGTCCCC ACATCGTCGA TTCGATCAAG AACGGCGATA TCGCGCTGGT CATCAACACG
ACCGAGGGCG CCGGTGCGCT GTCCGACTCA CGCTCCCTGA GGCGGGCGGC CCTCTTGCAT
AAAGTGCCGT ACTACACCAC TCTCGCTGGC GCGATGGCGG CGGCCGAGGG GATCAAGGCC
TATCTTGAAG GCGATCTTCA GGTTCGCGCC TTGCAGGAAT ACTTCGCGGC CTAA
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| Protein sequence | MPKRTDISSI LIIGAGPIII GQACEFDYSG TQACKALREE GYRIVLVNSN PATIMTDPDM
ADATYVEPIT PEIVAKIIEK ERPDALLPTM GGQTALNCAL SLKRMGVLEK FGVQMIGATA
EAIDKAEDRN LFRDAMTKIG LETPKSALAN ASAAKKADRD RYLAEKARIE AAQSDPAVRA
TALAEFDRQW SGGEGDRRRR YIEHALGQAL IALAEVGLPA IIRPSFTMGG TGGGIAYNRE
EFLEIVERGI DASPTNEVLI EESVLGWKEY EMEVVRDKAD NCIIVCSIEN VDPMGVHTGD
SITVAPALTL TDKEYQVMRD ASLAVLREIG VETGGSNVQF AIDPKTGRMI VIEMNPRVSR
SSALASKATG FPIAKVAAKL AVGYTLDEIA NDITGGATPA SFEPTIDYVV TKIPRFAFEK
FPGAEPTLTT AMKSVGEAMA IGRCFAESLQ KALRSLETGL TGLDEIEIEG LGKGDDHNAI
KAALGTPTPD RLLKVAQAMR LGISHEEIYA SCAIDPWFLE QLQAIVDLEN RVKAHGLPKT
PGAFRQLKAA GFSDARLAVL TDTDEDAVRA ARRGLGVRPV FKRIDTCAAE FKAPTAYMYS
TYVAPFAGQT SDEAYPSDKK KVIILGGGPN RIGQGIEFDY CCCHACFALT EAGYETIMVN
CNPETVSTDY DTSDRLYFEP LTEEDVLEIV ETERQAGTLH GVIVQFGGQT PLKLARALEA
AGVPILGTSP DAIDLAEDRD QFKRLLDKLG LKQPKNGIAY SVEQSRLVAA ELGLPFVVRP
SYVLGGRAMA IIHDEAQFAE YLLGTLPSLI PSDIKARYPN DKTGQINTVL GKNPLLFDRY
LSDATEVDVD AVCDGQSVFI AGIMEHIEEA GIHSGDSACS LPPRTLSPEI LAELERQTKA
MALALKVGGL MNVQYAIKDG AIYVLEVNPR ASRTVPFVAK VIGEPIAKIA ARIMAGERLD
SFGLKPKRLD HIAVKEAVFP FARFPGVDVL LGPEMRSTGE VIGLDAGFGV AFAKSQLGSG
TAVPRTGTVF VSVRDDDKPR VLPAIRQLAG LGFTILATGG TQRYLADEGI PTQRINKVLE
GRPHIVDSIK NGDIALVINT TEGAGALSDS RSLRRAALLH KVPYYTTLAG AMAAAEGIKA
YLEGDLQVRA LQEYFAA
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