| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_1292 |
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| Symbol | carB |
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| ID | 4450984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008542 |
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| Strand | + |
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| Start bp | 1420675 |
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| End bp | 1423929 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639693328 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_834937 |
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| Protein GI | 162227934 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC GCACAGACAT CAAGAGCATC CTCATCATCG GCGCCGGCCC GATCATCATC
GGCCAGGCGT GCGAGTTCGA CTATTCGGGC GCGCAGGCTT GCAAGGCGTT GCGTGAGGAG
GGCTACAAGG TCGTTCTCGT CAACAGCAAC CCGGCGACGA TCATGACCGA CCCGAACACG
GCCGACGTGA CCTACATCGA GCCGATCACG TGGGAAGTCG TCGCACGCAT CATCGAGAAG
GAGCGCCCGG ACGCGATCCT GCCGACGATG GGCGGCCAGA CCGCGCTGAA CTGCGCGCTC
GACCTGCACC ACCACGGCGT GCTCGAGAAG TTCGGCGTCG AGCTGATCGG CGCGTCGCCG
GAAGCGATCG ACAAGGCGGA AGACCGCCAG AAGTTCAAGG AAGCGATGAC CAAGATCGGT
CTCGGTTCCG CGAAGTCGGG CATCGCGCAC TCGATGGAAG AGGCGACCAA GGTCCACGCC
GAGATCATGG CGGAGACGGG CGGCAGCGGC TACCCGGTCG TGATCCGCCC GTCGTTCACG
CTCGGCGGCT CGGGCGGCGG CATCGCGTAC AACCGCGAAG AGTTCGAAGA GATCTGCAAG
CGCGGTCTCG ACCTGTCGCC CACGCGCGAG CTGCTGATCG AAGAGTCGCT GCTCGGCTGG
AAGGAATACG AGATGGAAGT CGTGCGCGAC CGCGCCGACA ACTGCATCAT CGTCTGCTCG
ATCGAAAACC TCGACCCGAT GGGCGTGCAC ACCGGCGACT CGATCACGGT AGCGCCTGCG
CAGACGCTCA CCGACAAGGA ATACCAGATC CTGCGTAACG CATCGCTCGC GGTGCTGCGC
GAGATCGGCG TCGACACGGG CGGCTCGAAC GTGCAGTTCT CGATCAACCC GCGGGACGGC
CGCATGGTCG TCATCGAGAT GAACCCGCGC GTGTCGCGTT CGTCGGCGCT CGCATCGAAG
GCGACCGGCT TCCCGATCGC GAAGGTCGCG GCGAAGCTGG CGGTCGGCTA CACGCTCGAC
GAGCTGAAGA ACGAAATCAC CGGCGGCCAG ACGCCGGCGT CGTTCGAGCC GACGATCGAC
TACGTCGTCA CGAAGATTCC GCGTTTCGCG TTCGAGAAGT TCCGCGAAGC CGATTCGCGC
CTGACCACGC AGATGAAGTC GGTCGGCGAA GTGATGGCGA TCGGCCGCAC GTTCCAGGAA
TCGTTCCAGA AGGCGCTGCG CGGCCTCGAA GTCGGTGTCG ACGGCCTCGA CGAGAAGTCG
ACCAACCGCG ACGAGATCGC GATCGAGATC CACGAGCCGG GTCCGGACCG CATCTGGTAC
GTCGGCGATG CGTTCCGCAT CGGCATGACG GCCGAGGAAA TCTTCGCGGA AACCGCGATC
GATCCGTGGT TCCTCGAGCA GATCGAGCAG ATCATCCTGA AGGAAAAGGC GCTGTCGGGC
CGCACGCTCG CGTCGCTGAC GTTCGACGAG CTGCGCTACC TGAAGCAGAG CGGCTTCTCC
GACCGCCGCC TCGCGAAGCT GCTCGGCGCG ACGCCGGAAG ACGTCCGCAA GCGTCGCGTC
GAACTGAACG TGCGCCCGGT CTACAAGCGC GTCGACACGT GCGCGGCCGA GTTCGCGACG
AAAACCGCCT ACATGTACTC GACCTATGAG GAAGAGTGCG AGGCGCAGCC GACCACGAAC
AAGAAGATCA TGGTGCTGGG CGGCGGCCCG AACCGGATCG GCCAGGGCAT CGAGTTCGAC
TACTGCTGCG TGCACGCGGC GCTCGCGATG CGCGAGGACG GCTATGAAAC GATCATGGTC
AACTGCAACC CGGAAACGGT GTCGACCGAC TACGACACGT CCGACCGCCT GTACTTCGAG
CCGCTGACGC TCGAGGACGT GCTCGAGATC GTCGACAAGG AAAAGCCGGT CGGCGTGATC
GTCCAGTATG GTGGCCAGAC GCCGCTGAAG CTCGCGCTCG ACCTCGAGGC GCACGGCGTG
CCGATCGTCG GCACGTCGCC GGACATGATC GACGCGGCCG AAGACCGCGA ACGCTTCCAG
AAGCTGCTGC AGGACCTCGG CCTGCGCCAG CCGCCGAACC GCACCGCGCG CGCCGAAGAC
GAAGCGCTCG CGCTGGCCGA CGAAATCGGC TACCCGCTGG TCGTGCGTCC GTCGTACGTG
CTCGGCGGCC GCGCGATGGA AATCGTCCAC GAGCCGCGCG ACCTCGAGCG CTACATGCGC
GAGGCCGTGA AGGTGTCGAA CGATTCGCCG GTGCTGCTCG ACCGCTTCCT GAACGACGCG
ATCGAGTGCG ACGTCGACTG CATCTGCGAC GGCGAAGCCG TGTTCATCGG CGGCGTGATG
GAGCACATCG AGCAGGCGGG CGTCCACTCG GGCGATTCGG CATGCTCGCT GCCGCCGTAC
TCGCTGTCGA AGGAAACCGT GGCCGAGCTG AAGCGCCAGA CGGGCGCGAT GGCGAAGGCG
CTGAACGTGG TCGGCCTGAT GAACGTGCAG TTCGCGATCC AGCAGGTGCC GCAGGCGGAC
GGCTCGAAGC AGGACATCAT CTACGTGCTG GAAGTGAACC CGCGCGCGTC GCGCACGGTG
CCGTACGTGT CGAAGGCGAC CAGCCTGCCG CTCGCGAAGA TCGCGGCGCG CGCGATGGTC
GGCCAGAAGC TCGCGCAGCA GGGCGTGACG AAGGAAGTCG AGCCGCCGTA CTTCAGCGTG
AAGGAAGCGG TGTTCCCGTT CGTCAAGTTC CCGACCGTCG ATCCGGTCCT CGGGCCTGAA
ATGCGCTCGA CCGGCGAAGT GATGGGCGTC GGCCAGACGT TCGGCGAAGC GCTGTTCAAG
TCGCAGCTCG CCGCCGGTTC TCGCCTGCCG GAGTCGGGCA CGGTGCTGCT GACCGTGATG
GACGCGGACA AGCCGAAGGC CGTCGAAGTC GCGCGCATGC TGCACGACCT CGGCTACCCG
ATCGTCGCGA CCAAGGGCAC GGCTGCCGCG ATCGAAGCGG CCGGCGTGCC GGTGAAGGTC
GTGAACAAGG TGAAGGACGG CCGTCCGCAC ATCGTCGACA TGATCAAGAA CGGCGAGATC
GCACTCGTGT TCACGACGGT CGACGAGACG CGCCAGGCGA TCGCCGATTC GCGCTCGATC
CGCATGAGCG CGCAGGCGCA CAAGGTCACG TACTACACGA CGATGTCGGG CGCGCGCGCG
GCCGTTGAAG GCTTGCGCTA CCTGAAGGAT CTGGAAGTCT ATGATTTACA AGGTCTTCAC
GCTCGCCTAA ACTAA
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| Protein sequence | MPKRTDIKSI LIIGAGPIII GQACEFDYSG AQACKALREE GYKVVLVNSN PATIMTDPNT
ADVTYIEPIT WEVVARIIEK ERPDAILPTM GGQTALNCAL DLHHHGVLEK FGVELIGASP
EAIDKAEDRQ KFKEAMTKIG LGSAKSGIAH SMEEATKVHA EIMAETGGSG YPVVIRPSFT
LGGSGGGIAY NREEFEEICK RGLDLSPTRE LLIEESLLGW KEYEMEVVRD RADNCIIVCS
IENLDPMGVH TGDSITVAPA QTLTDKEYQI LRNASLAVLR EIGVDTGGSN VQFSINPRDG
RMVVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGQ TPASFEPTID
YVVTKIPRFA FEKFREADSR LTTQMKSVGE VMAIGRTFQE SFQKALRGLE VGVDGLDEKS
TNRDEIAIEI HEPGPDRIWY VGDAFRIGMT AEEIFAETAI DPWFLEQIEQ IILKEKALSG
RTLASLTFDE LRYLKQSGFS DRRLAKLLGA TPEDVRKRRV ELNVRPVYKR VDTCAAEFAT
KTAYMYSTYE EECEAQPTTN KKIMVLGGGP NRIGQGIEFD YCCVHAALAM REDGYETIMV
NCNPETVSTD YDTSDRLYFE PLTLEDVLEI VDKEKPVGVI VQYGGQTPLK LALDLEAHGV
PIVGTSPDMI DAAEDRERFQ KLLQDLGLRQ PPNRTARAED EALALADEIG YPLVVRPSYV
LGGRAMEIVH EPRDLERYMR EAVKVSNDSP VLLDRFLNDA IECDVDCICD GEAVFIGGVM
EHIEQAGVHS GDSACSLPPY SLSKETVAEL KRQTGAMAKA LNVVGLMNVQ FAIQQVPQAD
GSKQDIIYVL EVNPRASRTV PYVSKATSLP LAKIAARAMV GQKLAQQGVT KEVEPPYFSV
KEAVFPFVKF PTVDPVLGPE MRSTGEVMGV GQTFGEALFK SQLAAGSRLP ESGTVLLTVM
DADKPKAVEV ARMLHDLGYP IVATKGTAAA IEAAGVPVKV VNKVKDGRPH IVDMIKNGEI
ALVFTTVDET RQAIADSRSI RMSAQAHKVT YYTTMSGARA AVEGLRYLKD LEVYDLQGLH
ARLN
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