| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0583 |
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| Symbol | |
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| ID | 6331579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 598496 |
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| End bp | 600088 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656870 |
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| Product | MGS domain protein |
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| Protein accession | YP_001930775 |
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| Protein GI | 188996524 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.774187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCAGA AAATAATTAT TCTTGGAAGT GGTCCAAATA GAATTGGTCA AGGTGTAGAG
TTTGACTATG CATGCGTTCA CTGTGTTTGG TCTTTAAGAG AAGAAGGATA TAAGGCTATA
ATGGTGAACT GCAACCCAGA GACTGTATCA ACAGATTATG ACACTTCTGA CAAGTTATTC
TTTGAGCCTA TTGTCCTTGA AGATGTTTTA AACATTATAG AAAAAGAAAA ACCGCTTGGT
GTAGTTGTTC AGTTTGGGGG TCAAACACCG TTAAAACTTG CAAAACCCTT AGAAAAATTA
AATATACCAA TTCTTGGCAC ATCGCCAGAA AGTATAGACA TTGCAGAGGA CAGAGAAAGG
TTTAGAGATT TAATCATAAA GCTTGGAATA AAACAGCCAG AAAGTGCAAT AGCAAAATCA
AAGGATGAAG CTGTAAAAGT AGCTCAAGAA ATAGGTTTTC CAGTTCTTGT AAGACCTTCT
TACGTCCTTG GTGGTAGAGC TATGAGATTA GTCTATGACA TGGAAGAGCT TTTGAAATAC
ATAGAAGAAG CTGTCATGGT TACAGAAGAT AGACCAATCC TTATAGATAA ATTCCTTGAT
GGAAGTATAG AAGTTGATGT TGATTGTGTT TGTGATGGAG AGGATGTTTT AGTTGGTGCA
GTGATGGAGC ATATAGAAGA AGCCGGTATC CACTCAGGAG ATAGTGCTAC TTGCATTCCA
CATTACACAC TTCCGGATGA GGTAGTAATT AAGATAAAAG AGCAATCAAG AATGCTTGCG
AAAGCTTTAA ATACGATAGG ACTTATAAAC ATACAGTATG CGATAAAAGA CAACGAAATC
TACATTATTG AAGCAAACCC AAGAGCATCA AGAACAGTTC CGTTTGTAAG TAAGGCTATC
GGATATCCAC TTGCTAAGAT TGCATCAAAA GTTATGATTG GCAAAAAATT AAGAGAAATC
ATTCCGGAAG TTTTCCAGAT AAAAGACCCA CATCCAGCAA CAGACTTCCA CTCAAAAGAC
TTTAAATACT TCGCAGTTAA AGAAGTGGTT TTCCCTTGGA ATAGATTTCC GGAAGTAGAC
CCATTACTTG GTCCAGAGAT GAAAAGCACA GGAGAAGTGA TGGGTATTGA TGAAGACCTT
GGTCTTGCAT TTTGGAAAGC ACAAGCTGCA GCAGGTCAGT TGCTGCCAGA AAAAGGAAAT
GTGTTTATAT CAGTAGCAGA CAAAGACAAA CCTCACATTT TAGATATTGC AAAAGAGCTT
AAAAATCTTG GATTTAATAT TTATGCAACA ACGGGAACTT ATAAATACTT AACAGAAAAT
GGCATAGAAG CTAATCTTGT AAACAAGCTA TCGGAAGAAA GACCAAACAT CGTTGATAGA
ATTAAAAATA ATGAAATAGC TTTAATCATA AACACACCTT CCGGTAAAAG AGAAAGGTCT
GATGCATATT ATATTAGAAG AGCAGCAGTT GCAACAAAAA CACCATACTT TACAACCGTA
AGAGGTGCCC AAGCTGCTGT CATGGCAATA AAATCATACA AAGAGAAAGG ATTAACAGTA
AAATCATTAC AAGAAATCCA TACAGGAGTT TAA
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| Protein sequence | MKQKIIILGS GPNRIGQGVE FDYACVHCVW SLREEGYKAI MVNCNPETVS TDYDTSDKLF
FEPIVLEDVL NIIEKEKPLG VVVQFGGQTP LKLAKPLEKL NIPILGTSPE SIDIAEDRER
FRDLIIKLGI KQPESAIAKS KDEAVKVAQE IGFPVLVRPS YVLGGRAMRL VYDMEELLKY
IEEAVMVTED RPILIDKFLD GSIEVDVDCV CDGEDVLVGA VMEHIEEAGI HSGDSATCIP
HYTLPDEVVI KIKEQSRMLA KALNTIGLIN IQYAIKDNEI YIIEANPRAS RTVPFVSKAI
GYPLAKIASK VMIGKKLREI IPEVFQIKDP HPATDFHSKD FKYFAVKEVV FPWNRFPEVD
PLLGPEMKST GEVMGIDEDL GLAFWKAQAA AGQLLPEKGN VFISVADKDK PHILDIAKEL
KNLGFNIYAT TGTYKYLTEN GIEANLVNKL SEERPNIVDR IKNNEIALII NTPSGKRERS
DAYYIRRAAV ATKTPYFTTV RGAQAAVMAI KSYKEKGLTV KSLQEIHTGV
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