| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2034 |
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| Symbol | carB |
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| ID | 6288681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2140433 |
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| End bp | 2143678 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625603 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001899600 |
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| Protein GI | 187929113 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.305177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT CAAAACCATC CTGATCATCG GCGCGGGTCC GATCATCATC
GGCCAGGCGT GTGAATTCGA TTACTCCGGC GCGCAGGCTT GCAAGGCGCT CCGTGAAGAA
GGCTTCAAGG TGGTCCTGGT CAACAGCAAC CCGGCCACGA TCATGACCGA CCCCAACACG
GCCGACGTGA CCTACATCGA GCCGATCACT TGGGAAGTCG TCGAGCGCAT CATCGCCAAG
GAGCGCCCCG ACGCGATCCT GCCGACGATG GGCGGCCAGA CCGCGCTCAA CTGCGCGCTG
GACCTGCATC GCCACGGCGT GCTGAAGAAG TACAACGTCG AGCTGATCGG CGCATCGCCC
GAGGCCATCG ACAAGGCGGA AGACCGCCAG AAGTTCAAGG ACGCGATGAC CAAGATCGGT
CTGGGTTCGG CCAAATCGGG CATCGCGCAT TCGATGGACG AAGCCGTGGC TGTGCAGTCG
CAGATCGCCA AGGAAACCGG CACGAGCGGC TACCCGATCG TGATCCGTCC GTCGTTCACG
CTGGGCGGCA CGGGCGGCGG CATCGCCTAC AACCGCGAAG AATTCGAAGA GATCTGCAAG
CGCGGTCTCG ACCTCTCGCC GACCAACGAG CTGCTGATCG AAGAATCGCT GCTCGGCTGG
AAGGAGTACG AGATGGAAGT CGTGCGCGAC AAGGCCGACA ACTGCATCAT CGTCTGCTCG
ATCGAGAACC TGGACCCGAT GGGCATCCAC ACCGGTGACT CCATCACTGT GGCCCCGGCG
CAGACCCTGA CCGACAAGGA ATACCAGATC CTGCGTAACG CCTCGCTGGC TGTGTTGCGC
GAGATCGGCG TGGATACCGG CGGCTCGAAC GTGCAGTTCT CGATCAATCC GCAGGATGGC
CGGATGATCG TGATCGAGAT GAACCCGCGT GTGTCGCGTT CGTCGGCGCT GGCGTCGAAG
GCCACCGGTT TCCCGATCGC CAAGGTCGCG GCCAAGCTGG CCGTGGGCTA CACGCTGGAC
GAGCTGAAGA ACGAGATCAC CGGCGGCGCG ACGCCGGCGT CGTTCGAGCC GTCGATCGAC
TACGTGGTCA CCAAGGTGCC GCGTTTCGCG TTCGAGAAAT TCCCGCAGGC CGACAGCCAC
CTGACCACGC AGATGAAGTC GGTCGGTGAG GTGATGGCCA TGGGCCGGAC GTTCCAGGAG
TCGTTCCAGA AGGCGCTGCG TGGCCTGGAA GTCGGCGTGG ACGGCCTGGA CGAAAAGTCC
ACCGACCGCG ACGAGATCAT CGAAGAGATC GGCGAAGCCG GTCCGGATCG CATCTGGTAT
CTGGGCGACG CATTCCGCCT GGGCCTGTCG ATCGACGAGG TTTATGCCGA GACGTCCGTT
GATCCGTGGT TCCTGGCGCA GATCGAAGAC ATCGTCAAGA CGGAAGCACT GGTGAAGTCC
CGCACGCTGG AAAGCCTGTC GGCTGCCGAG CTGCGTCTGC TCAAGCAGAA GGGTTTCTCC
GACCGCCGCC TTGCCAAGCT CACCAAGACG ACAGCCAAGG CCGTGCGCGA GAAGCGTATC
GCCGAGAAGG TGCGTCCGGT CTACAAACGT GTCGACACGT GCGCCGCTGA ATTCGCGACA
AACACGGCAT ACCTGTACTC CACGTACGAA GCCGAGCACG GCGAGTGCGA AGCCGAGCCG
ACCAGCAACA AGAAGATCAT GGTCCTGGGC GGCGGCCCGA ACCGGATCGG CCAAGGTATC
GAGTTCGACT ACTGCTGCGT GCACGCCGCG CTGGCACTGC GCGAAGACGG GTACGAGACC
ATCATGGTCA ACTGCAACCC GGAAACCGTC TCGACGGACT ACGACACGTC CGACCGCCTG
TACTTCGAGC CGGTGACGCT GGAAGACGTG CTCGAAATCG TTGACAAGGA AAAGCCGGTC
GGCGTGATCG TGCAATACGG CGGCCAGACG CCGCTGAAGC TCGCGCTGGA TCTGGAAGCC
AACGGCGTGC CCATCATCGG CACGTCGCCG GACATGATCG ACGCGGCCGA AGACCGTGAG
CGCTTCCAGA AGCTGCTGCA CGCGCTGGGA CTGCGCCAGC CGCCCAACCG CACCGCGCGT
GCCGAAGACG AAGCCCTCAA GCTGGCCGAA GAAATCGGCT ACCCGCTGGT GGTGCGTCCG
TCGTACGTGC TGGGTGGCCG CGCGATGGAA ATCGTGCACG AGCCGCGCGA CCTCGAGCGC
TACATGCGCG AAGCCGTGAA GGTGTCGAAC GACAGCCCCG TGCTGCTCGA CCGATTCCTG
AACGATGCCA TTGAATGCGA CGTGGATTGC CTTTCCGACG GCAAGCGCGT GTTCATCGGC
GGCGTGATGG AGCACATCGA ACAGGCCGGC GTGCACTCGG GCGACTCGGC TTGTTCGCTG
CCGCCGTACT CGCTGTCGCA GGCGACCGTC GACGAGCTCA AGCGCCAGAC CGCCGCGATG
GCCAAGGCGC TGAACGTGGT CGGCCTGATG AACGTGCAGT TTGCGATCCA GCAGAAGGGC
GGCGAAGACA TCGTCTACGT GCTGGAAGTG AACCCGCGTG CTTCGCGTAC GGTGCCGTAC
GTTTCGAAGG CGACCGGTAT TCCGCTGGCG AAGGTTGCGG CTCGCTGCAT GGCTGGCCAG
TCGCTGGATT CGCAAGGCGT CGAGACGGAA GTCGTGCCGG CGTACTACAG CGTCAAGGAG
GCTGTGTTCC CGTTCAACAA GTTCCCGGGG GTCGACCCGG TGCTCGGACC GGAAATGCGC
TCCACCGGCG AAGTGATGGG CGTTGGCAAG ACCTTTGGCG AGGCGCTCTT CAAGAGCCAG
CTGGCTGCCG GTTCGCGCCT GCCCGAGAAG GGTACCGTGC TGATGACGGT CAAGGACAGC
GACAAGCCGC AAGCCGTGGA AGTGGCCCGT GCGCTGCATA CGCTGGGCTA CCCGATCGTG
GCAACGCGCG GTACGGCCTC GGCCATTGAA GCTGCGGGCA TTCCGGTGCG CGTGGTGAAC
AAGGTGAAGG ACGGCCGTCC GCACATTGTC GACATGATCA AGAACAGCGA GATCGCGCTC
GTCTTCACGA CCGTCGACGA GACGCGTGCC GCAATCGCTG ACTCGCGCTC GATCCGCCAG
GCTGCATTGG CGCAGCGTGT CACGTACTAC ACGACCATCG CCGGTGCGCG TGCCGCGGTG
GAAGGTCTGA AGCACATGCA GCACCTCGAT GTGTATGACC TGCAGGGCCT GCACGCGACC
CTGTAA
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| Protein sequence | MPKRTDIKTI LIIGAGPIII GQACEFDYSG AQACKALREE GFKVVLVNSN PATIMTDPNT
ADVTYIEPIT WEVVERIIAK ERPDAILPTM GGQTALNCAL DLHRHGVLKK YNVELIGASP
EAIDKAEDRQ KFKDAMTKIG LGSAKSGIAH SMDEAVAVQS QIAKETGTSG YPIVIRPSFT
LGGTGGGIAY NREEFEEICK RGLDLSPTNE LLIEESLLGW KEYEMEVVRD KADNCIIVCS
IENLDPMGIH TGDSITVAPA QTLTDKEYQI LRNASLAVLR EIGVDTGGSN VQFSINPQDG
RMIVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGA TPASFEPSID
YVVTKVPRFA FEKFPQADSH LTTQMKSVGE VMAMGRTFQE SFQKALRGLE VGVDGLDEKS
TDRDEIIEEI GEAGPDRIWY LGDAFRLGLS IDEVYAETSV DPWFLAQIED IVKTEALVKS
RTLESLSAAE LRLLKQKGFS DRRLAKLTKT TAKAVREKRI AEKVRPVYKR VDTCAAEFAT
NTAYLYSTYE AEHGECEAEP TSNKKIMVLG GGPNRIGQGI EFDYCCVHAA LALREDGYET
IMVNCNPETV STDYDTSDRL YFEPVTLEDV LEIVDKEKPV GVIVQYGGQT PLKLALDLEA
NGVPIIGTSP DMIDAAEDRE RFQKLLHALG LRQPPNRTAR AEDEALKLAE EIGYPLVVRP
SYVLGGRAME IVHEPRDLER YMREAVKVSN DSPVLLDRFL NDAIECDVDC LSDGKRVFIG
GVMEHIEQAG VHSGDSACSL PPYSLSQATV DELKRQTAAM AKALNVVGLM NVQFAIQQKG
GEDIVYVLEV NPRASRTVPY VSKATGIPLA KVAARCMAGQ SLDSQGVETE VVPAYYSVKE
AVFPFNKFPG VDPVLGPEMR STGEVMGVGK TFGEALFKSQ LAAGSRLPEK GTVLMTVKDS
DKPQAVEVAR ALHTLGYPIV ATRGTASAIE AAGIPVRVVN KVKDGRPHIV DMIKNSEIAL
VFTTVDETRA AIADSRSIRQ AALAQRVTYY TTIAGARAAV EGLKHMQHLD VYDLQGLHAT
L
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