Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0939 |
Symbol | carB |
ID | 3570253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1018631 |
End bp | 1021837 |
Gene Length | 3207 bp |
Protein Length | 1068 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637679397 |
Product | carbamoyl phosphate synthase large subunit |
Protein accession | YP_284165 |
Protein GI | 71906578 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.245842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAAC GTACAGACAT AAAAAGTGTT TTGATTATTG GCGCCGGCCC GATCATCATC GGTCAGGCCT GCGAATTCGA CTACTCCGGC GCGCAAGCCT GCAAGGCGTT GCGCGAAGAG GGTTACAAGG TCATTCTGGT CAACTCCAAT CCGGCGACCA TCATGACCGA CCCGGAAATG GCCGATGTCA CCTACATCGA GCCGATCACC TGGCAGGTTG TCGCCAAGAT CATCGAAAAA GAACGCCCGG ACGCGCTGCT GCCGACCATG GGTGGCCAGA CCGCGCTGAA CTGCGCGCTC GATCTCGACC GCGAAGGCGT GCTCGCCAAG TTCAACGTCG AGCTGATCGG TGCTTCCAAG GAAGCGATCG ACAAGGCCGA AGACCGTCAG AAGTTCAAGG ATGCGATGAC CAAGATTGGT CTCGGTTCCG CCAAGTCTGC CACCGCGCAC AGCATGGAAG AGGCTTACCA GGTGCAGGCC GTGATCGGCT TCCCGACCAT CATCCGGCCC TCCTTCACGC TGGGCGGTAC GGGCGGCGGC ATCGCCTACA ACATGGAGGA GTTCGAGATC ATCTGCAAGC GCGGTCTCGA AGCATCGCCG ACCAACGAGC TGCTGATCGA GGAATCGCTG CTCGGCTGGA AGGAATACGA GATGGAAGTC GTCCGTGACA AGGCGGACAA CTGCATCATC ATCTGTTCGA TCGAGAACCT CGATCCGATG GGCGTGCACA CCGGCGACTC GATTACCGTT GCGCCGGCTC AGACGCTGAC CGACAAGGAA TACCAGATCC TGCGTAACGC CTCGATCGCC GTGTTGCGCG AGATTGGTGT CGATACGGGG GGGTCCAACG TCCAGTTCTC GATCAACCCG AAGGACGGTC GGATGATCGT CATCGAGATG AACCCGCGTG TTTCGCGTTC GTCGGCCCTG GCCTCCAAGG CGACCGGCTT CCCGATCGCC AAGATCGCCG CCAAGCTGTC GGTCGGCTAC ACGCTGGATG AACTGTCGAA CGACATCACC GGCGGCAAGA CGCCGGCCTC ATTCGAGCCC TCCATTGACT ACGTCGTGAC CAAGGTGCCG CGTTTCGCCT TCGAGAAATT CCCGCAGGCC GATTCGACGC TGACCACGCA GATGAAATCG GTTGGCGAAG TGATGGCTAT CGGTCGCACT TTCCAGGAAT CGCTGCAGAA AGCCTTGCGC GGTCTGGAAG TGGGTGTCGA TGGCTTCAAC CTGAAAACGG TCGATCCGGA AACCATCGAC GAACAACTGG CCCGGCCGAC GCCGGATCGC CTGTGGTACG TCGCTGACGC CTTCGGGATC GGCATGTCGG TCGAAAAAGT GTTTGACCTG ACCAAGATTG ATCCGTGGTT CCTGGTCCAG ATCAAGGAGA TCGTCGATCT CGAACTGGCT GTTGAAAAAC GTGAATTTTC TTCGTTGACC GCAGAAGAGC TGCGTTATCT CAAGCGTAAG GGATTTGCCG ACCGTCGTCT GGCTCACCTG ACCAAGACCA GTGAAACCGC TGTCCGCGAG CGTCGCCATG AACTCAAGGT GCGTCCGGTC TACAAGCGCG TTGACACCTG CGCTGCCGAG TTTTCGACCG GTACTGCCTA CATGTACTCG ACCTACGAGG ACGAGTGCGA GGCCATGCCG ACCGACAAGA AGAAGATCAT GGTGCTCGGC GGCGGTCCGA ACCGCATCGG TCAGGGCATC GAGTTCGACT ACTGCTGCGT GCATGCCGCG ATGGCGATGC GCGAGGATGG TTACGAGACC ATCATGGTCA ACTGCAATCC GGAAACCGTT TCCACCGACT ACGACACCTC CGACCGTCTG TACTTCGAGC CGCTGACGCT GGAAGACGTG CTGGAAATCT GCGCGATCGA AAAGCCGGTC GGCGTGATTG TCCAGTACGG TGGCCAGACC CCGCTCAAGC TTGCGCTGGC GCTGGAAGCC AATGGCGTGC CGATCATCGG CACGACGCCG GAGTCTATCG ACATCGCCGA AGACCGCGAG CGCTTCCAGA AGCTGCTGCA CGATCTCGGC CTGAAGCAAC CGCCGAATCG TACCGCTCGT ACCGAAGAGG ATGCGCTGCG TCTGGCTCAG GAGATCGGTT ATCCGCTGGT TGTTCGTCCG TCCTACGTGC TGGGCGGCCG GGCCATGGAA ATCGTCCATG AGCAGAAGGA CCTCGAGCGC TACATGCGCG AGGCGGTCAA GGTCTCCAAT GACTCGCCGG TGCTGCTCGA CCGCTTCCTG AACGACGCCG TCGAGTGTGA CGTCGATGCG CTTTCCGATG GCGAAGAAGT GATCATCGGT GGCGTCATGG AGCACATCGA ACAGGCGGGC GTGCACTCTG GTGACTCGGC CTGCTCGCTG CCGCCGTATT CTTTGTCGGC CGCCGTGCAG GACGAACTGC GTCGCCAGAC CAAGCTGATG GCCAAGGCGC TGAATGTTTG CGGCCTGATG AACGTCCAGT TCGCCATCAA GGACAACGAT GTCTACGTGC TGGAAGTGAA TCCGCGTGCG TCGCGCACCG TGCCTTTCGT TTCCAAAGCG ACTGGCCTGC AACTGGCGAA GATTGCCGCC CGCTGCATGG CGGGGCGCAG CCTGAAGGAC CAAGGTATTA CCAAGGAAAT CATTCCACCG TATTACTCGG TCAAGGAAGC AGTCTTCCCC TTCGTCAAAT TCCCGGGCGT CGATACCATT CTTGGGCCGG AAATGAAGTC GACCGGCGAA GTCATGGGGG TTGGTGTCAC CTTTGCCGAA GCCTTCGTCA AGTCGCAACT CGCTGCTGGC GTCAAGCTGC CAAAGTCCGG CAAGGTCTTC CTGTCAGTCA AGGATAGCGA TAAGGCCAAG GCGATCGAGA TCGCCCGCCA CCTGCACGAT GCCGGTTTCC ATCTTGCGGC AACGCGCGGT ACTGCGCACG CCATAGAGGC TGCCGGTCTG CCGGTGCAGT CGGTTAACAA GGTGACCGAA GGTCGTCCGC ACATTGTCGA CATGATCAAG AACAACGAAA TCGCACTGAT CATCAATACG GTGGAGGAAA AACGCGGTGC AATCAACGAC TCGCGTTCGA TCCGCACCTC GGGCCTGCAG GCACGGGTGA CCATGTATAC GACGATTTGG GGCGCCGAAG CCGCAGCTGA AGGTATCCGT CATCTGGGCG AGCTGGTGGT GTATCCGATT CAGGCGCTGC ACGAGCAGCT TCACTAA
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Protein sequence | MPKRTDIKSV LIIGAGPIII GQACEFDYSG AQACKALREE GYKVILVNSN PATIMTDPEM ADVTYIEPIT WQVVAKIIEK ERPDALLPTM GGQTALNCAL DLDREGVLAK FNVELIGASK EAIDKAEDRQ KFKDAMTKIG LGSAKSATAH SMEEAYQVQA VIGFPTIIRP SFTLGGTGGG IAYNMEEFEI ICKRGLEASP TNELLIEESL LGWKEYEMEV VRDKADNCII ICSIENLDPM GVHTGDSITV APAQTLTDKE YQILRNASIA VLREIGVDTG GSNVQFSINP KDGRMIVIEM NPRVSRSSAL ASKATGFPIA KIAAKLSVGY TLDELSNDIT GGKTPASFEP SIDYVVTKVP RFAFEKFPQA DSTLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGVDGFN LKTVDPETID EQLARPTPDR LWYVADAFGI GMSVEKVFDL TKIDPWFLVQ IKEIVDLELA VEKREFSSLT AEELRYLKRK GFADRRLAHL TKTSETAVRE RRHELKVRPV YKRVDTCAAE FSTGTAYMYS TYEDECEAMP TDKKKIMVLG GGPNRIGQGI EFDYCCVHAA MAMREDGYET IMVNCNPETV STDYDTSDRL YFEPLTLEDV LEICAIEKPV GVIVQYGGQT PLKLALALEA NGVPIIGTTP ESIDIAEDRE RFQKLLHDLG LKQPPNRTAR TEEDALRLAQ EIGYPLVVRP SYVLGGRAME IVHEQKDLER YMREAVKVSN DSPVLLDRFL NDAVECDVDA LSDGEEVIIG GVMEHIEQAG VHSGDSACSL PPYSLSAAVQ DELRRQTKLM AKALNVCGLM NVQFAIKDND VYVLEVNPRA SRTVPFVSKA TGLQLAKIAA RCMAGRSLKD QGITKEIIPP YYSVKEAVFP FVKFPGVDTI LGPEMKSTGE VMGVGVTFAE AFVKSQLAAG VKLPKSGKVF LSVKDSDKAK AIEIARHLHD AGFHLAATRG TAHAIEAAGL PVQSVNKVTE GRPHIVDMIK NNEIALIINT VEEKRGAIND SRSIRTSGLQ ARVTMYTTIW GAEAAAEGIR HLGELVVYPI QALHEQLH
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