| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0709 |
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| Symbol | carB |
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| ID | 6109619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 780762 |
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| End bp | 783983 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641620466 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001747583 |
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| Protein GI | 170719895 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0416816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGACAT CAAAAGCATC CTGATTCTCG GCGCTGGCCC GATCGTGATC
GGCCAGGCCT GTGAATTCGA CTACTCCGGC GCCCAGGCCT GTAAAGCCCT GCGTGAGGAA
GGTTTCCGCG TCATCCTGGT GAACTCCAAC CCAGCCACCA TCATGACCGA CCCGGCCATG
GCCGACGCCA CCTACATCGA GCCGATCAAG TGGCAGTCAG TGGCCAAGAT CATCGAAAAA
GAGCGCCCGG ACGCCGTTTT GCCGACCATG GGTGGCCAGA CCGCACTGAA CTGCGCCCTG
GACCTGGAGC GCCACGGCGT TCTGGAGAAG TTCGGCGTAG AGATGATCGG TGCCAACGCC
GACACCATCG ACAAGGCCGA AGACCGCTCG CGCTTCGACA AGGCCATGAA GGACATCGGC
CTGGAGTGCC CGCGCTCCGG TATCGCCCAC AGCATGGAAG AGGCCAATGC GGTCCTTGAG
AAGCTTGGCT TCCCATGCAT CATCCGCCCG TCGTTCACCA TGGGTGGCAC AGGTGGTGGT
ATCGCTTACA ACCGTGAAGA GTTCGAAGAA ATCTGCACCC GTGGTCTGGA CCTGTCGCCG
ACCAAAGAGC TGCTGATCGA CGAATCGCTG ATCGGCTGGA AAGAGTACGA GATGGAAGTG
GTCCGCGACA AAAAGGACAA CTGCATCATC GTCTGCTCGA TCGAAAACTT CGACCCGATG
GGCGTGCACA CCGGTGACTC GATCACCGTT GCTCCAGCGC AGACCCTGAC CGACAAGGAA
TACCAGATCA TGCGCAACGC CTCGCTGGCG GTGCTGCGTG AAATTGGCGT TGAAACCGGC
GGTTCCAACG TGCAGTTCGG TATCTGCCCG AACACCGGCC GCATGGTCGT GATCGAGATG
AACCCGCGTG TTTCGCGTTC CTCGGCGCTG GCTTCCAAGG CAACTGGCTT CCCGATCGCC
AAGATCGCCG CCAAGCTGGC CATTGGTTAC ACCCTTGACG AACTGCAGAA CGACATCACT
GGCGGCCGTA CTCCGGCGTC CTTCGAGCCG TCGATCGACT ACGTCGTCAC CAAGCTGCCA
CGCTTCGCCT TCGAGAAATT CCCGAAAGCC GACGCCCGCC TGACCACCCA GATGAAGTCC
GTGGGTGAAG TCATGGCCAT CGGCCGTACC TTCCAGGAAT CCCTGCAGAA AGCCCTGCGC
GGCCTGGAAG TCGGTGCTTG CGGTCTTGAC CCTAAAGTCG ACCTGGCCAG CCCGGAAGCC
GCCGGCATCC TCAAGCGCGA GCTGACCGTG CCGGGTGCCG AGCGCATCTG GTACGTGGCT
GACGCCATGC GTTCGGGTAT GACCTGCGAA GAGATCTTCG CCCTGACCGG CATCGACATG
TGGTTCCTGG TTCAGATGGA AGACCTGATC AAGGAAGAAG AGAAGGTCAA GACCCTGGCC
CTGTCGGCGA TCGACAAGGA CTACATGCTG CGCCTCAAGC GCAAGGGCTT CTCGGACCAG
CGTCTGGCCA AGCTGCTCGG CATCACCGAC AAGAACCTGC GCCGTCACCG CCACAAGCTG
GAAGTGTTCC CGGTGTACAA GCGCGTCGAC ACCTGCGCTG CCGAGTTCGC CACCGACACC
GCCTACCTGT ACTCCACCTA CGAGGAAGAG TGCGAGGCCA ACCCGTCGAC CCGCGACAAG
ATCATGATCC TGGGTGGCGG CCCTAACCGT ATCGGTCAAG GCATCGAGTT CGACTATTGC
TGCGTACACG CGGCACTGGC ACTGCGTGAA GACGGTTACG AGACCATCAT GGTCAACTGC
AACCCGGAAA CCGTCTCCAC CGACTACGAC ACCTCCGACC GCCTGTACTT CGAGCCGTTG
ACCCTGGAAG ACGTGCTGGA AGTCTGCCGC GTCGAGAAGC CCAAGGGCGT CATCGTCCAC
TACGGCGGCC AGACCCCGCT GAAACTGGCT CGCGCCCTGG AAGAGGCCGG CGTACCGATC
ATCGGTACCA GCCCGGACGC CATCGACCGT GCCGAAGACC GTGAGCGCTT CCAGCAGATG
GTTCAGCGCC TGAACCTGCT GCAGCCGCCA AACGCTACCG TGCGCAGCGA AGAAGAAGCC
ATCCGTGCCG CGGGCGGTAT CGGTTACCCG CTGGTGGTGC GCCCTTCCTA CGTACTGGGC
GGCCGTGCGA TGGAGATCGT CTACGAACTG GACGAGCTCA AGCGCTACCT GCGTGAAGCC
GTGCAAGTGT CCAACGACAG CCCGGTACTG CTGGACCACT TCCTCAACTG CGCCATCGAG
ATGGACGTGG ATGCGGTCTG CGACGGCACC GACGTGGTGA TCGGCGCGAT CATGCAGCAC
ATCGAGCAGG CCGGCGTTCA CTCCGGTGAC TCGGCGTGCT CGCTGCCGCC TTACTCGCTG
AGCAAGGACG TGCAGGACCA GGTTCGCGAT CAGGTACGCA AGATGGCCCT GGAGCTGGGC
GTGGTTGGCC TGATGAACGT GCAGTTGGCC TTGCAGGGCG ACAAGATCTA CGTGATCGAA
GTCAACCCGC GCGCCTCGCG TACCGTGCCG TTCGTGTCCA AGTGCATCGG CACTTCCCTG
GCGATGATCG CTGCCCGCGT CATGGCTGGC AAAACCCTGA AAGAGCTGGG CTTCACCCAG
GAAATCATCC CGAACTTCTA CAGCGTCAAG GAAGCCGTCT TCCCGTTCGC CAAGTTCCCG
GGGGTTGACC CGATCCTCGG CCCTGAGATG AAATCGACCG GTGAAGTCAT GGGTGTCGGT
GACAGCTTCG GTGAAGCGTT CGCCAAGGCT CAGATGGGTG CCAGCGAAGT GCTGCCAACG
GGCGGTACCG CGTTCATCAG CGTACGTGAC GACGACAAGC CGCAAGTGGC TGGAGTTGCC
CGTGACCTGA TCGCCCTGGG CTTCGAAGTG GTCGCTACTG CAGGTACCGC CAAGGTCATC
GAGGCGGCTG GCCTGAAAGT GCGCCGCGTG AACAAGGTGA CCGAAGGCCG TCCGCACGTG
GTCGACATGA TCAAGAACGA CGAAGTGTCG TTGATCATCA ACACCACCGA AGGCCGTCAG
TCGATTGCCG ATTCCTATTC GATTCGTCGC AATGCGTTGC AGCACAAGAT CTACTGCACC
ACGACCATTG CGGCTGGTGA AGCCATCTGC GAAGCGCTGA AATTCGGCCC TGAAAAGACC
GTTCGTCGCT TGCAGGATCT GCATGCAGGA CTTAAAGCAT GA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GFRVILVNSN PATIMTDPAM
ADATYIEPIK WQSVAKIIEK ERPDAVLPTM GGQTALNCAL DLERHGVLEK FGVEMIGANA
DTIDKAEDRS RFDKAMKDIG LECPRSGIAH SMEEANAVLE KLGFPCIIRP SFTMGGTGGG
IAYNREEFEE ICTRGLDLSP TKELLIDESL IGWKEYEMEV VRDKKDNCII VCSIENFDPM
GVHTGDSITV APAQTLTDKE YQIMRNASLA VLREIGVETG GSNVQFGICP NTGRMVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAIGY TLDELQNDIT GGRTPASFEP SIDYVVTKLP
RFAFEKFPKA DARLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGACGLD PKVDLASPEA
AGILKRELTV PGAERIWYVA DAMRSGMTCE EIFALTGIDM WFLVQMEDLI KEEEKVKTLA
LSAIDKDYML RLKRKGFSDQ RLAKLLGITD KNLRRHRHKL EVFPVYKRVD TCAAEFATDT
AYLYSTYEEE CEANPSTRDK IMILGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPL TLEDVLEVCR VEKPKGVIVH YGGQTPLKLA RALEEAGVPI
IGTSPDAIDR AEDRERFQQM VQRLNLLQPP NATVRSEEEA IRAAGGIGYP LVVRPSYVLG
GRAMEIVYEL DELKRYLREA VQVSNDSPVL LDHFLNCAIE MDVDAVCDGT DVVIGAIMQH
IEQAGVHSGD SACSLPPYSL SKDVQDQVRD QVRKMALELG VVGLMNVQLA LQGDKIYVIE
VNPRASRTVP FVSKCIGTSL AMIAARVMAG KTLKELGFTQ EIIPNFYSVK EAVFPFAKFP
GVDPILGPEM KSTGEVMGVG DSFGEAFAKA QMGASEVLPT GGTAFISVRD DDKPQVAGVA
RDLIALGFEV VATAGTAKVI EAAGLKVRRV NKVTEGRPHV VDMIKNDEVS LIINTTEGRQ
SIADSYSIRR NALQHKIYCT TTIAAGEAIC EALKFGPEKT VRRLQDLHAG LKA
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