Gene MCA1852 details

Gene Information

• Locus tag: MCA1852
• Symbol: carB
• ID: 3102823
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 1986654
• End bp: 1989872
• Gene Length: 3219 bp
• Protein Length: 1072 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637171011
• Product: carbamoyl-phosphate synthase, large subunit
• Protein accession: YP_114289
• Protein GI: 53803859
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAAC GTACCGATAT CAAATCGATT CTGCTCCTGG GCGCCGGCCC CATCGTCATC 
GGCCAGGCCT GTGAGTTCGA CTACTCCGGC GCCCAGGCCT GCAAGGCGCT GAAGGAGGAA 
GGCTATCGGG TCATCCTGGT CAATTCGAAT CCGGCCACGA TCATGACGGA CCCGGAGATG 
GCCGATGCAA CCTACATCGA ACCGATCGAC TGGCAGACGG TTGCCCGCAT CATCGAAAAG 
GAGCGTCCGG ATGCGCTGCT GCCGACCATG GGCGGCCAGA CGGCGCTCAA CTGTGCACTG 
GACCTGGACC GCGAAGGTGT GCTGGAGCGG TTTGGGGTGG AGATGATCGG CGCCAGCCGC 
GAAGCCATCG CCAAGGCCGA GGACCGCGAC CAGTTCCGCA AGGCCATGAT CAAGATCGGC 
CTGTCAGTAC CGAAATCCGA GGTGGCTCAC AGCCTTGAAG AGGCGTTGTC CGTGCTGGAC 
ATGGTCGGCT ATCCCGCCAT CATCCGACCT TCCTTTACCC TGGGTGGGTC CGGTGGCGGT 
ATCGCCTACA ACCGCGAGGA GTTCGTGGAA ATCTGCGAAC GCGGGCTGGA GCTTTCGCCG 
ACCCACGAAC TGCTGATCGA GGAGTCGGTG CTCGGCTGGA AAGAGTACGA GATGGAGGTG 
GTGCGCGACC GTGCCGACAA CTGCATCATC GTCTGTTCGA TCGAAAACCT CGATCCCATG 
GGGGTTCATA CCGGCGATTC GATCACGGTC GCGCCGGCGC AGACGCTGAC CGACAAGGAA 
TACCAGATCA TGCGTGACGC CTCGATCGCG GTGCTGCGCG AGATCGGGGT GGATACCGGC 
GGTTCCAACG TCCAGTTCGC CGTCAATCCG AGGGACGGCC GTCTGATCGT GATCGAGATG 
AATCCCCGGG TGTCGCGTTC TTCGGCGCTG GCTTCCAAGG CCACCGGTTT CCCCATTGCC 
AAGGTCGCTG CCAAGCTGGC GGTCGGCTAT ACCCTGGACG AGCTGCGCAA CGAGATCACC 
GGCGGTGCCA TGCCGGCGTC GTTCGAACCG ACCATCGATT ATGTGGTGAC CAAGGTCCCG 
CGCTTCACCT TCGAAAAATT CCCGCAGGCG GACGATCGCC TCACCACCCA GATGAAGTCG 
GTAGGCGAAG CCATGGCGAT CGGCCGGACT TTCCAGGAGT CGCTGCAGAA GGCCTTACGC 
AGCCTGGAGA TCGGGGTGGA CGGGTTGGTC GGCAAGCTCA CTGCGGACAG CGACGACCGG 
GTGGAGCGCT TGCAGCGCGA GCTGGGCCAT CCGGGCTGCG ACCGTCTGTT CTACGTCGCC 
GACGCTTTCC GGCTGGGTTG GAGTCTCGAC CAGGTCCATG AGCTGAGTGC CATCGATCCC 
TGGTTCCTCG CCCAGATCGA GGATTTGATC CTCGAGGAAG CCGCCCTGGC CAAGCGTACC 
CTTGCATCGC TTACCCCTGA CGAACTGCTG GCTCTGAAAC GCAAGGGATT CTCCGATTCC 
CGTCTGGCCC GCCTGCTGGA CCGCAGCGAA GCCGAAGTGC GGGCGGTGCG ACATCGTTTC 
GGCATCCGTC CGGTGTACAA GCGGATCGAC TCCTGCGCGG CCGAGTTCGC CACCGTCACC 
GCTTATCTTT ACTCGACCTA CGAGGAAGAG TGTGAAGCCG CGCCGACGGA CCGGGAGAAG 
ATCGTCGTGC TCGGCGGCGG TCCCAACCGC ATCGGCCAGG GCATCGAGTT CGACTATTGC 
TGCGTGCACG CGGCGATGGC GCTGCGGGAG GATGGTTTCG AAACCATCAT GATCAACTGC 
AATCCGGAGA CGGTGTCGAC CGATTTCGAC ACCTCCGACC GCCTGTATTT CGAGCCGCTG 
ACGCTGGAGG ATGTGCTCGA AGTGGTTCAT CTGGAGAAGC CGAAGGGCGT GATCGTGCAA 
TACGGCGGCC AGACGCCGCT GAAGCTGGCC CGGGCGCTGG AAGCGGCCGG CGTGCCGATC 
ATCGGCACTT CGCCCGATTC CATAGACCTG GCCGAGGACC GTGAGCGCTT CCAGAAACTG 
ATCGACCGGC TCAACCTGAA ACAGCCGCCC AACCGCACCG CGCGCTCGCT GGAAGAGGCC 
CTGCGGGGTG CCCAGGAAAT AGGCTACCCG CTGGTCGTGC GTCCCTCCTA TGTATTGGGT 
GGCCGGGCCA TGGAAATCGT GTTCAACGAC GATGACCTCA AGCGCTATAT GCTGGAAGCC 
GTCAGTGTTT CCAACGAATC CCCGGTGCTG CTCGACCGCT TCCTGTCCGA TGCCATCGAG 
ATGGATGTGG ATGCCGTCGC CGACGGCCAG CGCGTGATGA TCGGCGGCTT GATGCAGCAC 
ATCGAGCAGG CGGGGGTGCA TTCGGGCGAT TCCGCCTGCT CGATTCCGCC GTATGACCTG 
CGGGCGGACA TCCAGGACCG GGTCAGAGAG CAGGTCCGCC TGCTGGCGGA GGCATTGGGC 
GTGGTCGGTT TGATGAACAC CCAGTTCGCC ATCCAGGATG ATGAGATATT CGTACTGGAA 
GTGAATCCGC GCGCCTCCCG CACCGTTCCC TTCGTCTCGA AGGCGACCGG ATATCCCTTG 
GCCAAGGTCG CGGCGCGCTG CATGGTCGGG CGCAGCCTCG ACCAGCAGGG CGTGAGCGAA 
GAACGCGTTC CGCCGTATTT CTCGGTGAAG GAGGCGGTGT TTCCCTTCAT CAAATTCCCT 
GGTGTCGACC CGCTGCTCGG GCCGGAGATG AAGTCGACCG GCGAGGTGAT GGGTGTCGGC 
GCCAGCTTCG GCGAGGCCTA CGCCAAGGCG CAGCGGGCCG CGAGTGTGCG TCTGGCCTAC 
GAGGGGACGA CCCTCATCAG CATCCGTGAC GCCGACAAGC CCAAGATCGT TCCGATCGCG 
AAGGCCCTGG TCGCCAGGGG GTTCCGCCTG GTGGCCACGC GAGGCACGGC GAAGGTGCTG 
CAGGATGCGG GCGTGCCTTG CGAAAAGGTG AACAAGGTGT ACGAAGGGCG GCCGCATATT 
GTCGACATGA TCAAGAACGG CCAGATTCAG CTTATCATCA ATACGACCGA GGGCAAGAAG 
GCCATCGCCG ATTCGTTCAC CATTCGGCGG CAGGCTCTGC AGCATCAGGT GACCTACACC 
ACCACGATTT CCGGCGCCCA TGCGATCTGC TGTGCGCTGG ACGAACTCGG CTCGGTGGAC 
GTCAACCGGC TGCAGGATTT GCATGGCGCC CTATCCTGA 

 

Protein sequence

MPKRTDIKSI LLLGAGPIVI GQACEFDYSG AQACKALKEE GYRVILVNSN PATIMTDPEM 
ADATYIEPID WQTVARIIEK ERPDALLPTM GGQTALNCAL DLDREGVLER FGVEMIGASR 
EAIAKAEDRD QFRKAMIKIG LSVPKSEVAH SLEEALSVLD MVGYPAIIRP SFTLGGSGGG 
IAYNREEFVE ICERGLELSP THELLIEESV LGWKEYEMEV VRDRADNCII VCSIENLDPM 
GVHTGDSITV APAQTLTDKE YQIMRDASIA VLREIGVDTG GSNVQFAVNP RDGRLIVIEM 
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELRNEIT GGAMPASFEP TIDYVVTKVP 
RFTFEKFPQA DDRLTTQMKS VGEAMAIGRT FQESLQKALR SLEIGVDGLV GKLTADSDDR 
VERLQRELGH PGCDRLFYVA DAFRLGWSLD QVHELSAIDP WFLAQIEDLI LEEAALAKRT 
LASLTPDELL ALKRKGFSDS RLARLLDRSE AEVRAVRHRF GIRPVYKRID SCAAEFATVT 
AYLYSTYEEE CEAAPTDREK IVVLGGGPNR IGQGIEFDYC CVHAAMALRE DGFETIMINC 
NPETVSTDFD TSDRLYFEPL TLEDVLEVVH LEKPKGVIVQ YGGQTPLKLA RALEAAGVPI 
IGTSPDSIDL AEDRERFQKL IDRLNLKQPP NRTARSLEEA LRGAQEIGYP LVVRPSYVLG 
GRAMEIVFND DDLKRYMLEA VSVSNESPVL LDRFLSDAIE MDVDAVADGQ RVMIGGLMQH 
IEQAGVHSGD SACSIPPYDL RADIQDRVRE QVRLLAEALG VVGLMNTQFA IQDDEIFVLE 
VNPRASRTVP FVSKATGYPL AKVAARCMVG RSLDQQGVSE ERVPPYFSVK EAVFPFIKFP 
GVDPLLGPEM KSTGEVMGVG ASFGEAYAKA QRAASVRLAY EGTTLISIRD ADKPKIVPIA 
KALVARGFRL VATRGTAKVL QDAGVPCEKV NKVYEGRPHI VDMIKNGQIQ LIINTTEGKK 
AIADSFTIRR QALQHQVTYT TTISGAHAIC CALDELGSVD VNRLQDLHGA LS