Gene Dole_1446 details

Gene Information

• Locus tag: Dole_1446
• Symbol: carB
• ID: 5694283
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1721408
• End bp: 1724608
• Gene Length: 3201 bp
• Protein Length: 1066 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641264041
• Product: carbamoyl phosphate synthase large subunit
• Protein accession: YP_001529327
• Protein GI: 158521457
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAAGC GGGACGACAT ACATAAAGTA ATGATCATCG GGTCCGGTCC CATCATCATC 
GGACAGGCCT GCGAGTTTGA CTATTCCGGC ACCCAGGCCT GCAAGGCCCT TCGCAGCCTG 
GGCTACACCG TTGTGCTGGT CAACTCCAAC CCGGCCACCA TCATGACGGA CCCTGGTATG 
GCGGACATCA CCTATATCGA GCCCCTGAAC GTGGCCACCC TGACTCGGAT CATTGAAAAA 
GAGCGGCCCG ACGCCCTTCT GCCCAACCTC GGAGGCCAGT CCGGGCTCAA CCTCTCTTCC 
GAGCTCCACC AGGCCGGCGT GCTGGACAAA TACGGGGTCA AGATCATCGG CGTTAACGTG 
GATGCCATAA AGCGGGGCGA GGACCGCACC GAGTTCAAGA ACACCATGGA GCGGCTGGGC 
ATTGAGATGG CCAGGAGCAG GACGGTCACC ACCGTGGAAG ACGCCGAAAA AGTGGCCGAG 
GAGATCGGTT ACCCGGTGGT GATCCGGCCG GCCTACACCA TGGGCGGCAC CGGCGGCGGG 
TTTGTCTACA ACGTGGAAGA ACTCCGCGTC ATCGCGGCCC GGGGGCTGGC CGCCAGCATG 
GTCAACCAGG TACTGGTGGA GGAGTCGGTA CTGGGCTGGG AAGAGCTGGA GCTGGAGGTG 
GTGCGGGACG CCAAAAACCA GAAGATCACG GTCTGCTTCA TTGAGAACGT GGATGCCATG 
GGGGTCCACA CCGGTGACTC CTTCTGCACG GCGCCCATGA TGACCATCTC GCCCGCGCTT 
CAGGAACGGC TTCAGAAGTA CTCCTATGAT ATCGTGGACG CCATCGAGGT GATCGGCGGC 
ACCAACGTGC AGTTTGCCCA CGACCCGGCA ACCGGCCGGG TGGTGGTCAT CGAGATCAAC 
CCCCGCACCT CCCGGTCGTC GGCCCTGGCC TCCAAGGCAA CGGGCTTTCC CATTGCCATG 
GTATCGGCCC TGCTGGCCGG GGGGCTGACC CTGGATGAGA TTCCCTACTG GCGGGATGGC 
ACCCTGGAAA AGTACACCCC CTCCGGGGAT TACGTGGTGG TAAAGTTTGC CAAGTGGGCT 
TTTGAAAAGT TTGTCGGCGC CGAAGATGTG CTGGGCACCC AGATGAAGGC CGTGGGCGAG 
GTGATGAGCA TCGGGAAAAA CTACAAGGAG GCCCTGCAGA AGGCGATCCG GTCCCTGGAA 
AACGGCCGCC ACGGACTGGG CTTTGCCAAA AACTTCAACA CGATCTCCTT AGATGACCTG 
ATGGCAAAGC TGCGTAAGCC CTCCAGCGAG AGGCAGTTTA TTATGTACGA GGCCCTGCGA 
AAAGGGGCAA CCATCGAGGC CCTGCACGGG CTGACCCACA TCAAGGCCTG GTTTATCGAG 
CAGATGAAGG AACTGGTGGA CCTGGAAGAG ACACTGATCA AACACCGGGG AAACCTGCCG 
CCGGACGACC TGTTTGTGAC GGCCAAAAAG GACGGGTTTG CCGACGCCTA CCTGTCAAAA 
ATTCTGGCCG TGCCCGAGAC CGAGATCCGG AAAAAGCGCC TCTCCCTGGG CCTGGCCGAG 
GCCTGGGAGC CGGTGCCGGT AAGCGGGGTG GAGAACGCGG CCTACTACTA CTCCACCTAC 
AACGCCCCGG ACCAGGTGGC GGTGTCGGAA AACAGGAAGG TCATGGTGCT GGGCGGCGGC 
CCCAACCGCA TCGGCCAGGG CATTGAGTTC GATTACTGCT GCGTTCACGC CGCCTTTGCC 
ATTCGGGATC AGGGGCTGGA ATCGATCATG GTCAACTGCA ATCCGGAAAC GGTCTCCACG 
GATTACGACA CATCCAATAA GCTCTATTTC GAACCCCTGA CCGTGGAGGA TGTGCTCAGC 
ATCTACGCAA AGGAAAAGCC CGATGGCGTG ATCGTGCAGT TCGGCGGCCA GACCCCGCTC 
AACCTCGCCA GGGCACTGGA AGCGGCGGGC GTCAACATCC TTGGTACCTC GCCGGACACC 
ATCGACCTGG CCGAGGACCG GGACCGGTTC CGTCAGGTGA TGCAGGACTT GGGCATTCCC 
CAGCCCGAAT CGGGCATGGC CAGCACCCTG GACCAGGCCC TGGAGATCGC GGCCCGCATT 
GGCTATCCGC TGATGGTGCG GCCCTCCTAT GTGCTGGGGG GCAGGGCCAT GGAGGTGGTG 
GCCGATGAAG AGATGCTGCG CCAGTATGTG ACGGCGGCCG TGGACGTGTC GCCGGACCGG 
CCCATTCTCA TCGACAAGTT CCTGGAAAAC GCCATCGAGG CCGAGGCCGA CGCTATTGCC 
GACGGCACCG ACGCCTTTGT GCCCGCCGTG ATGGAGCATA TCGAACTGGC CGGAGTCCAT 
TCCGGAGACT CGGCCTGCGT GCTGCCGCCG GTCTCCATTC CGGAAAAACA CATCAACACC 
ATTGTGGACT ACACGCGGAA GATCGCCATG ACCCTGAAGG TGGTGGGGCT GATGAACATT 
CAGTACGCCA TTGCCGACGA CTGCGTCTAT ATTCTGGAAG CCAACCCCCG GGCCTCCCGC 
ACCGTGCCCC TGGTCTCCAA GGTGTGCAAT ATTCCCATGG CCCGGTACGC GGCACAGATC 
ATGATGGGCG AGACCTTGGC CGACCTGGAT TTAAAGCCGC GCAAGGTCCG CCATTTCGGC 
GTCAAGGAGT CGGTTTTTCC GTTTAACATG TTTCCCGAGG TCGACCCGGT GCTGGGGCCG 
GAGATGCGCT CCACAGGCGA GGTGCTGGGC ATTGCAGACT CCTTCGGCTA CGCCTTTTTC 
AAGGCCCAGG AGGCCACCCA GGCCCCGCTG CCCACCGGCG GGGCCGTGCT GATCACCGTG 
GCCGACAAGG ACAAGCAGGC CATTCTGGAA ACGGCTCGCC TGTTCAGCGA TCTGGGCTTT 
ACCGTGCTGG CCACCCAGGG CACCGGCGAG TTTCTCTCCC GCCAGGGCAT TGCCGCCCAG 
GCTGTCACCA AGCTGGGCCA TGGCCGGCCC GACATCGTGG ACCTGATCAA GAACGGCGAT 
ATCCAACTGC TGGTCAACAC GCCGGGCGGC AAGGCCAGCA AGGAGGATGA CTCCTATATC 
CGCAAGGCGG CGGTCAAGTA CAAGGTGCCG TACATGACCA CCGTAGCCGC CTCCCTGGCC 
GCGGCCCGGG GCATTGCCGC ACGGAACCGG GGCGAAGAGC AGATCCATTC GCTTCAGGAG 
TACCACGCCA ACATCACCTG A 

 

Protein sequence

MPKRDDIHKV MIIGSGPIII GQACEFDYSG TQACKALRSL GYTVVLVNSN PATIMTDPGM 
ADITYIEPLN VATLTRIIEK ERPDALLPNL GGQSGLNLSS ELHQAGVLDK YGVKIIGVNV 
DAIKRGEDRT EFKNTMERLG IEMARSRTVT TVEDAEKVAE EIGYPVVIRP AYTMGGTGGG 
FVYNVEELRV IAARGLAASM VNQVLVEESV LGWEELELEV VRDAKNQKIT VCFIENVDAM 
GVHTGDSFCT APMMTISPAL QERLQKYSYD IVDAIEVIGG TNVQFAHDPA TGRVVVIEIN 
PRTSRSSALA SKATGFPIAM VSALLAGGLT LDEIPYWRDG TLEKYTPSGD YVVVKFAKWA 
FEKFVGAEDV LGTQMKAVGE VMSIGKNYKE ALQKAIRSLE NGRHGLGFAK NFNTISLDDL 
MAKLRKPSSE RQFIMYEALR KGATIEALHG LTHIKAWFIE QMKELVDLEE TLIKHRGNLP 
PDDLFVTAKK DGFADAYLSK ILAVPETEIR KKRLSLGLAE AWEPVPVSGV ENAAYYYSTY 
NAPDQVAVSE NRKVMVLGGG PNRIGQGIEF DYCCVHAAFA IRDQGLESIM VNCNPETVST 
DYDTSNKLYF EPLTVEDVLS IYAKEKPDGV IVQFGGQTPL NLARALEAAG VNILGTSPDT 
IDLAEDRDRF RQVMQDLGIP QPESGMASTL DQALEIAARI GYPLMVRPSY VLGGRAMEVV 
ADEEMLRQYV TAAVDVSPDR PILIDKFLEN AIEAEADAIA DGTDAFVPAV MEHIELAGVH 
SGDSACVLPP VSIPEKHINT IVDYTRKIAM TLKVVGLMNI QYAIADDCVY ILEANPRASR 
TVPLVSKVCN IPMARYAAQI MMGETLADLD LKPRKVRHFG VKESVFPFNM FPEVDPVLGP 
EMRSTGEVLG IADSFGYAFF KAQEATQAPL PTGGAVLITV ADKDKQAILE TARLFSDLGF 
TVLATQGTGE FLSRQGIAAQ AVTKLGHGRP DIVDLIKNGD IQLLVNTPGG KASKEDDSYI 
RKAAVKYKVP YMTTVAASLA AARGIAARNR GEEQIHSLQE YHANIT