| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0639 |
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| Symbol | carB |
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| ID | 7134101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 569915 |
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| End bp | 573154 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643529045 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_002425128 |
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| Protein GI | 218666972 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAC ACCAGGACAT CAAAAGCGTC CTCCTCATCG GCGCCGGACC CATCATCATC
GGCCAGGCCT GTGAATTCGA TTATTCCGGC GTACAGGCCT GCAAGGCGTT GCGGGAAGAG
GGTTGCCGGG TCATTCTGGT CAACTCCAAC CCTGCCACCA TCATGACCGA TGCGCAGACT
GCGGACGCCA CCTATATCGA ACCCGTCGAG TGGCAAACCG TGGCGCGCAT CATCGCCATG
GAACGCCCCG ATGCCATTCT CCCCACCATG GGCGGTCAGA CCGCACTGAA CTGTGCCCTG
GACCTACACC GGGAGGGGGT GTTGGAGCAG TACGGTGTCA AACTAATCGG CGCTTCCGTG
GAAGCCATCC GTGAGGCCGA AGATCGCGGC CTCTTCAAAA AGGCCATGGA AGAAATCGGC
CTGGAAGTGG CCCGCTCCGC TTTCGGCCAT GATATGGAAG GCGCGCGCCA GATCGCGGAG
GATATCGGCT TTCCGGTCAT CATCCGGCCA TCCTTCACCC TGGGCGGCAC CGGCGGCGGC
ATTGCCTACA ACCGTGAGGA ATTTGAGGAC ATCGCGGCGC GCGGCCTGGA GGCCAGTCCT
ACCCACGAAA TCCTCATCGA AGAATCCATC ATCGGTTGGA AGGAATTCGA GATGGAAGTG
GTCCGCGACC GGGCGGATAA CTGTATCATC GTTTGCTCTA TCGAGAACTT CGATCCCATG
GGCATCCATA CCGGGGACTC CATCACCGTA GCCCCCGCCC AGACTCTTAC GGATCGTGAA
TACCAGCGCA TGCGGGATGC CTCCATCGCC GTGTTGCGGC GTATCGGGGT GGATACCGGC
GGCTCCAATG TACAGTTCGC CGTCAATCCC GAAGATGGGC GACTGATCGT CATCGAGATG
AACCCGCGGG TGTCGCGTTC TTCGGCGCTG GCCTCCAAGG CCACCGGGTT TCCCATTGCC
AAAATTGCCG CCAAGCTCGC ACTGGGTTAC ACCCTGGATG AGCTGCGCAA TGACATCACC
CAGGCGACAC CGGCGAGTTT CGAGCCGACC ATCGATTATG TGGTCACCAA AATCCCCCGC
TTCGCCTTCG AGAAGTTTCC CGAGGCCGAT GCCCACCTGA CCACTCAGAT GAAGTCAGTG
GGTGAAGTGA TGGCCATTGG CCGCAGCTTC CAGGAGTCGC TGCAAAAGGC GCTGCGTGGC
CTGGAGACGG GTGTGGATGG CCTGGATGAG AAACTCATCG GCAATGATCC GGACACCCTG
CAAAAACTGG AACAGGAGTT ACGGGTTCCC GGTGCCGATC GCCTCTGGTA CCTGGCGGAC
GCCGTACGGC GCGGCTGGGA TCAGGACAGC CTGCAACGCA TCACCCGCAT CGACCCCTGG
TTTCTGGAGC AGATTTTCGA GATCATTCAG ACCGAGGAAA GCCTGCGCGG TCTCTCTCTG
GCGGGCCTCG ACGATGCCCG GCTCCGCACC CTCAAAGGCA TGGGTTTCTC GGACCGGCGG
CTGTCCCGCC TGTTGGGTTG CCACGAGCAG CAGTTGCGTG AACAGCGCCA GAGGCTGGGT
GTCCGCCCCG TCTACAAACG GGTGGATACC TGTGCCGCCG AGTTCCGCTC GCCGACTCCG
TATCTCTACT CCACCTATGA GACGGAGTGC GAGGCGGAAC CGGGTGTTAA ACCCAAGATC
ATGATTCTGG GCGGCGGTCC CAACCGGATC GGACAGGGCA TCGAGTTTGA CTACTGTTGC
GTGCATGCGG CCATGGCCCT GCAGGAGGAT GGCTTTGAGA CCATCATGGT CAACTGCAAC
CCGGAAACGG TGTCCACCGA CTATGACACT TCCGATCGCC TGTATTTTGA GCCGCTCACC
CTGGAAGACG TCCTCGAAAT CGTCGCCGTC GAAAAGCCGC ATGGTGTGAT CGTCCAGTTT
GGCGGCCAGA CACCGCTGAA GCTCGCCAAC GATCTGGAGG CCGCCGGGGT GCCCATCATC
GGCACCACAC CGGATTCCAT CGATCTGGCT GAGGATCGCG AGCGCTTCCA GCAGCTTTTG
CAACGCCTCG ACCTGCGGCA ACCGGAAAAC GCCATTGCCC GGAGCGCCCC GGAAGCCCTG
AGCAAGGCGC GAGCGCTGGG CTACCCGCTG GTGGTACGCC CCTCCTATGT GCTGGGCGGT
CGCGCCATGC GCATCGTCTA TGGGGAAGAC GACCTGCAAC GCTACATGTT GGAAGCGGTG
CGCATCTCCA ATGACCAGCC CATCCTCCTG GACCGTTTCC TGAATGACGC CCTGGAAGTG
GACGTCGATG CCGTCGCCGA CAGCGGGCAA CAGGTGATCG TGGCTGGGAT CATGGAGCAC
ATCGAGCAGG CGGGAGTCCA CAGCGGCGAC TCGGCCTGCT GCCTGCCGCC CTACTCTCTG
TCCCCGGCCA TTCAAGACGA AATCCGGCGG CAGACCGTGG AACTGGCCCT GGCGCTCGGG
GTGGTGGGCC TGATGAACTG TCAGTTCGCC GTCCAGAACG AGCGCATCTA TGTGCTGGAG
GTTAACCCGC GCGCGTCACG GACGGTACCT TTCGTCTCCA AGGCTACGGG ATGGCCCCTG
GCCAAAATCG CCTCCCGCTG CATGACCGGA AAGTCTTTGG CCGCGCAGGG CGTTCCACAG
ATTCCCAACC CGCCCCATTT CAGCGTCAAG GAAGCGGTCT TCCCCTTTAT CAAATTTCCC
GGCGTGGATA TACTGCTAGG GCCGGAAATG AAGTCTACGG GCGAAGTGAT GGGTATAGGC
GCCAGTTTTG GTGAGGCTTT TCTAAAGGCG CAGGTTGGTG CGGGCGAACA CTTTCCGAGC
TCCGGCACGG TTTTTCTCAG TGTTCGCGAT GCCGATAAAA AGGGGCTCAC CCCGACCGCT
CGGATCCTGT CCGAACTCGG GTTCAAACTG ATCGCCACTG GGGGCACCGC AGCCTTCCTG
CAGAAGGAAG GTCTGGAAGT CGCCCCGGTT AACAAGGTGA CCGAAGGCCG TCCCCATATC
GTCGATGCAA TCAAGAACGG CAAGGTGCAG ATCATCATCA ACACCGTGGA CGAACGCCAG
TCGGTGCGGG ATTCTTTCAG TATCCGCCGC GCCGCTCTGC AGATGGGATT GACCTATTAC
ACTACCCTGG CTGGCGCCAC CGCGGGCGCC GCCGCCATTC ACGCTCTGAT GACGGAAGAA
TGCAGCGTAC TCCGGCTCCA GGATCTGAAC CAGAAAAGTA CCAGCACGAG GCAGATATGA
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| Protein sequence | MPKHQDIKSV LLIGAGPIII GQACEFDYSG VQACKALREE GCRVILVNSN PATIMTDAQT
ADATYIEPVE WQTVARIIAM ERPDAILPTM GGQTALNCAL DLHREGVLEQ YGVKLIGASV
EAIREAEDRG LFKKAMEEIG LEVARSAFGH DMEGARQIAE DIGFPVIIRP SFTLGGTGGG
IAYNREEFED IAARGLEASP THEILIEESI IGWKEFEMEV VRDRADNCII VCSIENFDPM
GIHTGDSITV APAQTLTDRE YQRMRDASIA VLRRIGVDTG GSNVQFAVNP EDGRLIVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLALGY TLDELRNDIT QATPASFEPT IDYVVTKIPR
FAFEKFPEAD AHLTTQMKSV GEVMAIGRSF QESLQKALRG LETGVDGLDE KLIGNDPDTL
QKLEQELRVP GADRLWYLAD AVRRGWDQDS LQRITRIDPW FLEQIFEIIQ TEESLRGLSL
AGLDDARLRT LKGMGFSDRR LSRLLGCHEQ QLREQRQRLG VRPVYKRVDT CAAEFRSPTP
YLYSTYETEC EAEPGVKPKI MILGGGPNRI GQGIEFDYCC VHAAMALQED GFETIMVNCN
PETVSTDYDT SDRLYFEPLT LEDVLEIVAV EKPHGVIVQF GGQTPLKLAN DLEAAGVPII
GTTPDSIDLA EDRERFQQLL QRLDLRQPEN AIARSAPEAL SKARALGYPL VVRPSYVLGG
RAMRIVYGED DLQRYMLEAV RISNDQPILL DRFLNDALEV DVDAVADSGQ QVIVAGIMEH
IEQAGVHSGD SACCLPPYSL SPAIQDEIRR QTVELALALG VVGLMNCQFA VQNERIYVLE
VNPRASRTVP FVSKATGWPL AKIASRCMTG KSLAAQGVPQ IPNPPHFSVK EAVFPFIKFP
GVDILLGPEM KSTGEVMGIG ASFGEAFLKA QVGAGEHFPS SGTVFLSVRD ADKKGLTPTA
RILSELGFKL IATGGTAAFL QKEGLEVAPV NKVTEGRPHI VDAIKNGKVQ IIINTVDERQ
SVRDSFSIRR AALQMGLTYY TTLAGATAGA AAIHALMTEE CSVLRLQDLN QKSTSTRQI
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