| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4723 |
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| Symbol | carB |
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| ID | 1042416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5368704 |
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| End bp | 5371925 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637148127 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | NP_746831 |
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| Protein GI | 161378120 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00575089 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGACAT CAAAAGCATC CTGATTCTCG GCGCTGGCCC GATCGTGATC
GGCCAGGCCT GCGAATTCGA CTACTCCGGC GCCCAGGCCT GTAAAGCCCT GCGCGAGGAA
GGTTTCCGCG TCATCCTGGT GAACTCCAAC CCAGCCACCA TCATGACCGA CCCGGCCATG
GCTGACGCCA CCTACATCGA GCCGATCAAG TGGCAATCGG TGGCCAAGAT CATCGAGAAA
GAGCGCCCGG ACGCCGTCCT GCCGACCATG GGTGGCCAGA CCGCCCTGAA CTGCGCCCTG
GACCTGGAGC GCCACGGCGT TCTGGAGAAG TTCGGCGTGG AGATGATCGG TGCCAACGCT
GACACCATCG ACAAGGCCGA AGACCGTTCG CGCTTCGACA AGGCCATGAA GGACATCGGC
CTGGAGTGCC CGCGCTCCGG TATCGCCCAC AGCATGGAAG AGGCCAATGC GGTCCTCGAG
AAGCTCGGCT TCCCGTGCAT CATTCGCCCG TCGTTCACCA TGGGCGGCAC CGGCGGCGGT
ATCGCTTACA ACCGTGAAGA GTTCGAAGAA ATCTGCACCC GTGGTCTGGA CCTGTCGCCG
ACCAAAGAGC TGCTGATCGA CGAATCGCTG ATCGGCTGGA AGGAATACGA GATGGAGGTG
GTCCGCGACA AGAAGGACAA CTGCATCATC GTCTGCTCGA TCGAGAACTT CGACCCGATG
GGTGTGCACA CCGGTGACTC GATCACTGTT GCCCCGGCAC AGACCCTGAC CGACAAGGAA
TACCAGATCA TGCGCAACGC CTCGCTGGCG GTGCTGCGTG AAATCGGTGT GGAAACCGGC
GGTTCCAACG TCCAGTTCGG CATTTGCCCG AACACCGGCC GCATGGTTGT CATCGAGATG
AACCCGCGCG TGTCGCGTTC GTCCGCCCTG GCCTCCAAGG CCACCGGCTT CCCGATCGCC
AAGATCGCCG CCAAGCTGGC CATTGGTTAC ACCCTCGACG AGCTGCAGAA CGACATCACT
GGCGGTCGCA CCCCAGCGTC CTTCGAACCT TCGATCGACT ACGTCGTCAC CAAGCTGCCA
CGCTTCGCCT TCGAGAAATT CCCGAAAGCC GACGCCCGCC TGACCACCCA GATGAAATCC
GTGGGTGAAG TCATGGCCAT CGGCCGTACT TTCCAGGAAT CCCTGCAGAA AGCCCTGCGC
GGCCTGGAAG TCGGCGCCTG CGGCCTCGAC CCGAAAGTCG ACCTGGCCAG CCCGGAAGCC
GCCAGCATCC TCAAGCGCGA ACTGACCGTG CCGGGTGCCG AGCGTATCTG GTACGTGGCT
GACGCCATGC GTTCGGGCAT GACCTGCGAA GAAATCTTCA ATCTGACCGG CATCGACATG
TGGTTCCTGG TGCAGATGGA AGACCTGATC AAGGAAGAAG AGAAGGTCAA GACCCTGGCC
CTGTCGGCAA TCGACAAGGA CTACATGCTG CGCCTCAAGC GCAAGGGCTT CTCGGACCAG
CGCCTGGCAG TACTGCTGGG TATCACCGAC AAGAACCTGC GTCGCCACCG CCACAAGCTG
GAAGTGTTCC CGGTGTACAA GCGCGTCGAC ACCTGCGCCG CCGAGTTCGC CACCGACACC
GCCTACCTGT ACTCCACCTA CGAGGAAGAG TGCGAGGCCA ACCCGTCGAC CCGCGACAAG
ATCATGATCC TGGGTGGCGG CCCGAACCGT ATCGGCCAAG GTATCGAGTT CGACTACTGC
TGCGTACACG CCGCCCTGGC GCTGCGTGAA GACGGTTACG AGACCATCAT GGTCAACTGC
AACCCGGAAA CCGTCTCCAC CGACTACGAC ACTTCCGACC GCCTGTACTT CGAGCCGCTG
ACCCTGGAAG ACGTGCTGGA AGTCTGCCGC GTCGAGAAGC CGAAGGGCGT GATCGTTCAC
TACGGCGGCC AGACCCCGCT GAAGCTGGCC CGCGCTCTGG AAGAGGCTGG CGTGCCGATC
ATCGGTACCA GCCCTGACGC CATCGACCGC GCCGAAGACC GCGAGCGCTT CCAGCAGATG
GTTCAGCGCC TGAGCCTGCT GCAGCCGCCA AACGCCACCG TGCGCAGCGA AGAAGAAGCC
ATCCGTGCTG CGGGCAGCAT CGGCTACCCG CTGGTCGTGC GTCCGTCCTA CGTACTGGGC
GGCCGTGCCA TGGAGATCGT CTACGAGCTG GACGAGCTCA AGCGCTACCT GCGTGAAGCG
GTACAAGTGT CGAACGACAG CCCGGTACTG CTCGACCACT TCCTCAACTG CGCCATCGAG
ATGGACGTGG ATGCGGTGTG CGACGGCACC GACGTGGTCA TCGGCGCGAT CATGCAGCAC
ATCGAGCAGG CCGGCGTACA CTCCGGCGAC TCGGCGTGCT CGCTGCCACC TTACTCGCTG
AGCAAGGAAG TGCAGGACGA AGTCCGCGTT CAGGTCAAGA AAATGGCGCT GGAGCTGGGT
GTAGTCGGCC TGATGAACGT GCAGCTGGCC CTGCAGGGCG ACAAGATCTA CGTGATCGAA
GTCAACCCGC GTGCCTCGCG TACCGTACCG TTCGTGTCCA AGTGCATCGG CACGTCCCTG
GCGATGATCG CAGCCCGTGT CATGGCGGGT AAAACCCTGA AAGAGCTGGG CTTCACCCAG
GAAATCATCC CGAACTTCTA CAGCGTGAAG GAAGCCGTCT TCCCGTTCGC CAAGTTCCCA
GGGGTTGACC CGATCCTCGG CCCTGAGATG AAATCGACCG GTGAAGTGAT GGGTGTCGGT
GACAGCTTCG GTGAAGCCTT CGCCAAAGCC CAGATGGGTG CCAGCGAAGT GCTGCCGACT
GGCGGTACCG CGTTCATCAG CGTGCGCGAC GACGACAAGC CACAAGTGGC CGGCGTTGCC
CGCGACCTGA TCGCCCTGGG CTTCGAAGTG GTTGCCACTG CCGGCACCGC CAAGGTTATC
GAGGCGGCTG GCCTGAAAGT GCGCCGTGTG AACAAGGTGA CCGAAGGTCG CCCTCACGTG
GTCGACATGA TCAAGAACGA CGAAGTGTCG CTGATCATCA ACACCACCGA AGGTCGCCAG
TCGATCGCCG ACTCCTACTC GATTCGTCGC AATGCGCTGC AGCACAAGAT TTACTGCACC
ACTACCATTG CGGCTGGTGA AGCCATCTGC GAAGCGCTGA AATTCGGTCC GGAAAAGACC
GTTCGTCGCT TGCAGGATCT GCATGCAGGA CTGAAAGCAT GA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GFRVILVNSN PATIMTDPAM
ADATYIEPIK WQSVAKIIEK ERPDAVLPTM GGQTALNCAL DLERHGVLEK FGVEMIGANA
DTIDKAEDRS RFDKAMKDIG LECPRSGIAH SMEEANAVLE KLGFPCIIRP SFTMGGTGGG
IAYNREEFEE ICTRGLDLSP TKELLIDESL IGWKEYEMEV VRDKKDNCII VCSIENFDPM
GVHTGDSITV APAQTLTDKE YQIMRNASLA VLREIGVETG GSNVQFGICP NTGRMVVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAIGY TLDELQNDIT GGRTPASFEP SIDYVVTKLP
RFAFEKFPKA DARLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGACGLD PKVDLASPEA
ASILKRELTV PGAERIWYVA DAMRSGMTCE EIFNLTGIDM WFLVQMEDLI KEEEKVKTLA
LSAIDKDYML RLKRKGFSDQ RLAVLLGITD KNLRRHRHKL EVFPVYKRVD TCAAEFATDT
AYLYSTYEEE CEANPSTRDK IMILGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPL TLEDVLEVCR VEKPKGVIVH YGGQTPLKLA RALEEAGVPI
IGTSPDAIDR AEDRERFQQM VQRLSLLQPP NATVRSEEEA IRAAGSIGYP LVVRPSYVLG
GRAMEIVYEL DELKRYLREA VQVSNDSPVL LDHFLNCAIE MDVDAVCDGT DVVIGAIMQH
IEQAGVHSGD SACSLPPYSL SKEVQDEVRV QVKKMALELG VVGLMNVQLA LQGDKIYVIE
VNPRASRTVP FVSKCIGTSL AMIAARVMAG KTLKELGFTQ EIIPNFYSVK EAVFPFAKFP
GVDPILGPEM KSTGEVMGVG DSFGEAFAKA QMGASEVLPT GGTAFISVRD DDKPQVAGVA
RDLIALGFEV VATAGTAKVI EAAGLKVRRV NKVTEGRPHV VDMIKNDEVS LIINTTEGRQ
SIADSYSIRR NALQHKIYCT TTIAAGEAIC EALKFGPEKT VRRLQDLHAG LKA
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