More than 300 homologs were found in PanDaTox collection
for query gene Franean1_3891 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_3891  binding-protein-dependent transport systems inner membrane component  100 
 
 
300 aa  579  1e-164  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.000896674  normal  0.103005 
 
 
-
 
NC_013521  Sked_17280  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  52.33 
 
 
325 aa  288  9e-77  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.158115  normal  0.544115 
 
 
-
 
NC_009921  Franean1_2281  binding-protein-dependent transport systems inner membrane component  53.47 
 
 
281 aa  279  4e-74  Frankia sp. EAN1pec  Bacteria  normal  0.695693  normal  0.331928 
 
 
-
 
NC_012669  Bcav_3788  binding-protein-dependent transport systems inner membrane component  55.06 
 
 
317 aa  269  4e-71  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0255815  normal 
 
 
-
 
NC_008726  Mvan_3142  binding-protein-dependent transport systems inner membrane component  50.78 
 
 
264 aa  256  2e-67  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.32312  normal  0.0411868 
 
 
-
 
NC_013441  Gbro_0259  binding-protein-dependent transport systems inner membrane component  50.81 
 
 
453 aa  255  6e-67  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  37 
 
 
277 aa  159  6e-38  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2588  binding-protein-dependent transport systems inner membrane component  39.47 
 
 
267 aa  147  3e-34  Pseudomonas putida W619  Bacteria  normal  normal  0.417353 
 
 
-
 
NC_002947  PP_3210  ABC transporter, permease protein  39.47 
 
 
267 aa  145  7.0000000000000006e-34  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
264 aa  140  1.9999999999999998e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
264 aa  140  1.9999999999999998e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  36.89 
 
 
267 aa  136  5e-31  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_007953  Bxe_C0801  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  32.66 
 
 
298 aa  135  9.999999999999999e-31  Burkholderia xenovorans LB400  Bacteria  normal  0.0745387  normal 
 
 
-
 
NC_009485  BBta_1263  ABC transporter permease  34.51 
 
 
262 aa  134  9.999999999999999e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.165267 
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
264 aa  135  9.999999999999999e-31  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  37.55 
 
 
252 aa  134  1.9999999999999998e-30  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  32.56 
 
 
280 aa  132  1.0000000000000001e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_008312  Tery_1625  binding-protein-dependent transport systems inner membrane component  35.68 
 
 
285 aa  128  1.0000000000000001e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0792607  normal  0.95709 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  32.84 
 
 
268 aa  127  2.0000000000000002e-28  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
283 aa  127  2.0000000000000002e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_007802  Jann_1473  binding-protein-dependent transport systems inner membrane component  34.26 
 
 
283 aa  125  6e-28  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3562  binding-protein-dependent transport systems inner membrane component  38.06 
 
 
263 aa  124  2e-27  Opitutus terrae PB90-1  Bacteria  normal  0.120198  normal  0.916816 
 
 
-
 
NC_013440  Hoch_2033  binding-protein-dependent transport systems inner membrane component  37.36 
 
 
275 aa  122  7e-27  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0253714  normal  0.258175 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
281 aa  120  3e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
254 aa  119  6e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  32 
 
 
257 aa  118  9e-26  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_011369  Rleg2_1676  binding-protein-dependent transport systems inner membrane component  33.55 
 
 
287 aa  118  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00381914  normal 
 
 
-
 
NC_011989  Avi_3552  ABC transporter membrane spanning protein  32.17 
 
 
285 aa  117  3e-25  Agrobacterium vitis S4  Bacteria  normal  0.0625026  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  33.18 
 
 
250 aa  115  1.0000000000000001e-24  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4665  binding-protein-dependent transport systems inner membrane component  33.22 
 
 
284 aa  115  1.0000000000000001e-24  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.65192 
 
 
-
 
NC_009952  Dshi_1382  binding-protein-dependent transport systems inner membrane component  32.36 
 
 
285 aa  114  1.0000000000000001e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.13305  normal 
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  33.98 
 
 
251 aa  114  2.0000000000000002e-24  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  33.03 
 
 
250 aa  113  4.0000000000000004e-24  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  33.03 
 
 
250 aa  113  5e-24  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  33.03 
 
 
250 aa  113  5e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  33.5 
 
 
251 aa  112  5e-24  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  33.03 
 
 
250 aa  113  5e-24  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  33.5 
 
 
250 aa  112  6e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  30.51 
 
 
277 aa  111  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  29.92 
 
 
257 aa  110  2.0000000000000002e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  32.45 
 
 
246 aa  110  3e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  33.01 
 
 
250 aa  110  3e-23  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  33.5 
 
 
251 aa  109  5e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  32.37 
 
 
250 aa  109  7.000000000000001e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  34.56 
 
 
261 aa  108  1e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  30.95 
 
 
249 aa  108  1e-22  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  30.09 
 
 
253 aa  108  1e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1076  ABC transporter-like protein  31.82 
 
 
488 aa  107  2e-22  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.276573 
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  31.58 
 
 
259 aa  107  2e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_007406  Nwi_0333  binding-protein dependent transport system inner membrane protein  35.6 
 
 
278 aa  107  3e-22  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_0427  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
279 aa  107  3e-22  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  29.3 
 
 
260 aa  107  3e-22  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_011004  Rpal_0469  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
274 aa  106  4e-22  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.858995  n/a   
 
 
-
 
NC_008825  Mpe_A3414  ATP-binding protein of ABC transporter  34.38 
 
 
280 aa  106  5e-22  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.24016 
 
 
-
 
NC_009485  BBta_7480  ABC transporter permease  36.16 
 
 
271 aa  106  5e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.477102  normal  0.131238 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
286 aa  106  6e-22  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  31.08 
 
 
287 aa  106  6e-22  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  28.85 
 
 
281 aa  105  9e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  35.38 
 
 
281 aa  105  1e-21  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  29.11 
 
 
258 aa  104  1e-21  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  33.33 
 
 
288 aa  103  3e-21  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
282 aa  103  3e-21  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  32.82 
 
 
289 aa  103  3e-21  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_013521  Sked_02100  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  29.17 
 
 
308 aa  103  5e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_5134  binding-protein-dependent transport systems inner membrane component  32.3 
 
 
294 aa  102  6e-21  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  29.5 
 
 
266 aa  102  1e-20  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0258  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
274 aa  101  1e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.750925 
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  29.5 
 
 
266 aa  101  1e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007925  RPC_0572  binding-protein-dependent transport systems inner membrane component  36.72 
 
 
276 aa  100  2e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_3419  binding-protein-dependent transport systems inner membrane component  29.34 
 
 
258 aa  100  3e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.121812  n/a   
 
 
-
 
NC_014212  Mesil_0817  ABC transporter related protein  31.87 
 
 
492 aa  100  3e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  0.309085  normal  0.730271 
 
 
-
 
NC_012850  Rleg_3934  binding-protein-dependent transport systems inner membrane component  33.48 
 
 
278 aa  100  3e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.421742  normal 
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
362 aa  100  3e-20  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2621  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
281 aa  99.8  5e-20  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00000218671  n/a   
 
 
-
 
NC_011757  Mchl_2050  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
321 aa  99.4  7e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.577348 
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  30.59 
 
 
375 aa  99  8e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  30.77 
 
 
375 aa  98.2  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0572  binding-protein-dependent transport systems inner membrane component  36.27 
 
 
274 aa  98.6  1e-19  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0627389  normal  0.343483 
 
 
-
 
NC_011666  Msil_1164  binding-protein-dependent transport systems inner membrane component  38.79 
 
 
260 aa  98.6  1e-19  Methylocella silvestris BL2  Bacteria  n/a    normal  0.233018 
 
 
-
 
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  34.51 
 
 
321 aa  97.8  2e-19  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
270 aa  98.2  2e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3904  binding-protein-dependent transport systems inner membrane component  32.08 
 
 
281 aa  97.8  2e-19  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
286 aa  98.2  2e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_009953  Sare_4268  binding-protein-dependent transport systems inner membrane component  28.4 
 
 
282 aa  97.1  3e-19  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0113678 
 
 
-
 
NC_009523  RoseRS_0669  binding-protein-dependent transport systems inner membrane component  28.69 
 
 
272 aa  97.4  3e-19  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0848141 
 
 
-
 
NC_006274  BCZK0354  ABC transporter, permease  28.77 
 
 
265 aa  97.4  3e-19  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  32.45 
 
 
268 aa  97.4  3e-19  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_009428  Rsph17025_1464  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
287 aa  97.1  3e-19  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  30.58 
 
 
273 aa  96.7  4e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3145  binding-protein-dependent transport systems inner membrane component  33.63 
 
 
298 aa  96.7  4e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.433007  normal  0.243208 
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  32.97 
 
 
322 aa  96.7  5e-19  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  30.31 
 
 
263 aa  96.3  5e-19  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_013093  Amir_4887  binding-protein-dependent transport systems inner membrane component  29.75 
 
 
267 aa  96.7  5e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  30.24 
 
 
273 aa  96.7  5e-19  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  29.65 
 
 
257 aa  96.7  5e-19  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  32.89 
 
 
322 aa  96.3  6e-19  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  27.82 
 
 
266 aa  96.3  6e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  30.22 
 
 
265 aa  96.3  6e-19  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  36.97 
 
 
260 aa  95.9  7e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
254 aa  95.5  8e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
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