More than 300 homologs were found in PanDaTox collection
for query gene Mrub_1883 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013946  Mrub_1883  binding-protein-dependent transport systems inner membrane component  100 
 
 
322 aa  625  1e-178  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.167871 
 
 
-
 
NC_014212  Mesil_2099  binding-protein-dependent transport systems inner membrane component  78.36 
 
 
306 aa  440  9.999999999999999e-123  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_3460  ABC transporter membrane spanning protein  44.17 
 
 
288 aa  217  2e-55  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2372  binding-protein-dependent transport systems inner membrane component  48.71 
 
 
289 aa  216  4e-55  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.239724 
 
 
-
 
NC_008254  Meso_2046  binding-protein-dependent transport systems inner membrane component  48.12 
 
 
286 aa  214  1.9999999999999998e-54  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3297  binding-protein-dependent transport systems inner membrane component  48.71 
 
 
375 aa  213  2.9999999999999995e-54  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.149558 
 
 
-
 
NC_011369  Rleg2_3042  binding-protein-dependent transport systems inner membrane component  44.4 
 
 
375 aa  211  1e-53  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_0344  binding-protein-dependent transport systems inner membrane component  44.86 
 
 
286 aa  209  7e-53  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.113814  n/a   
 
 
-
 
NC_010172  Mext_1731  binding-protein-dependent transport systems inner membrane component  50.45 
 
 
321 aa  208  1e-52  Methylobacterium extorquens PA1  Bacteria  normal  0.443029  normal 
 
 
-
 
NC_011757  Mchl_2050  binding-protein-dependent transport systems inner membrane component  50.45 
 
 
321 aa  207  2e-52  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.577348 
 
 
-
 
NC_008044  TM1040_1494  binding-protein-dependent transport systems inner membrane component  48.71 
 
 
281 aa  207  3e-52  Ruegeria sp. TM1040  Bacteria  normal  0.58323  normal 
 
 
-
 
NC_007643  Rru_A3455  binding-protein dependent transport system inner membrane protein  50.87 
 
 
322 aa  204  2e-51  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.833863  n/a   
 
 
-
 
NC_012880  Dd703_0037  binding-protein-dependent transport systems inner membrane component  48.67 
 
 
362 aa  203  4e-51  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1373  binding-protein-dependent transport systems inner membrane component  45.63 
 
 
303 aa  202  6e-51  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.674946  normal  0.833857 
 
 
-
 
NC_007802  Jann_2700  binding-protein-dependent transport systems inner membrane component  47.41 
 
 
316 aa  201  9.999999999999999e-51  Jannaschia sp. CCS1  Bacteria  normal  0.505407  normal  0.565906 
 
 
-
 
NC_009485  BBta_6031  putative ABC transporter, permease protein  45.16 
 
 
325 aa  199  3.9999999999999996e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1083  binding-protein-dependent transport systems inner membrane component  50 
 
 
321 aa  199  7e-50  Methylobacterium populi BJ001  Bacteria  normal  0.148611  normal  0.032179 
 
 
-
 
NC_009428  Rsph17025_1465  binding-protein-dependent transport systems inner membrane component  47.76 
 
 
283 aa  197  3e-49  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0180  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  48.71 
 
 
283 aa  191  1e-47  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.105797  n/a   
 
 
-
 
NC_009049  Rsph17029_1813  binding-protein-dependent transport systems inner membrane component  48.71 
 
 
283 aa  191  1e-47  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.210707  normal  0.296576 
 
 
-
 
NC_009921  Franean1_3131  binding-protein-dependent transport systems inner membrane component  36.78 
 
 
281 aa  140  1.9999999999999998e-32  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4254  binding-protein-dependent transport systems inner membrane component  33.88 
 
 
283 aa  136  6.0000000000000005e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.0441349  normal  0.902161 
 
 
-
 
NC_008786  Veis_3506  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
282 aa  131  1.0000000000000001e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0528385  normal  0.0939424 
 
 
-
 
NC_009485  BBta_1169  putative ABC transporter permease protein  39.79 
 
 
279 aa  132  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0620  binding-protein-dependent transport systems inner membrane component  35.65 
 
 
254 aa  130  3e-29  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.63161  normal 
 
 
-
 
NC_011894  Mnod_2985  binding-protein-dependent transport systems inner membrane component  35.5 
 
 
273 aa  127  4.0000000000000003e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1862  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
257 aa  126  5e-28  Variovorax paradoxus S110  Bacteria  normal  0.116723  n/a   
 
 
-
 
NC_013739  Cwoe_3810  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
258 aa  125  7e-28  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.42897 
 
 
-
 
NC_007778  RPB_3118  binding-protein dependent transport system inner membrane protein  34.05 
 
 
284 aa  120  3e-26  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1221  binding-protein-dependent transport systems inner membrane component  33.77 
 
 
246 aa  120  3e-26  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010511  M446_0770  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
273 aa  118  9.999999999999999e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_012852  Rleg_6281  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
256 aa  119  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.783663  normal 
 
 
-
 
NC_009485  BBta_7629  putative ABC transporter permease protein  34.75 
 
 
282 aa  117  3e-25  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.262472  normal  0.441686 
 
 
-
 
NC_012669  Bcav_3788  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
317 aa  117  3e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0255815  normal 
 
 
-
 
NC_008148  Rxyl_3036  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
266 aa  117  3e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2574  binding-protein-dependent transport systems inner membrane component  37.37 
 
 
252 aa  117  3e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2100  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
275 aa  117  3.9999999999999997e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_2703  binding-protein-dependent transport systems inner membrane component  29.71 
 
 
263 aa  116  5e-25  Marinomonas sp. MWYL1  Bacteria  normal  0.88688  normal 
 
 
-
 
NC_013946  Mrub_1884  binding-protein-dependent transport systems inner membrane component  37.31 
 
 
307 aa  116  6e-25  Meiothermus ruber DSM 1279  Bacteria  normal  0.665089  normal  0.160596 
 
 
-
 
NC_007963  Csal_1933  binding-protein-dependent transport systems inner membrane component  31.54 
 
 
255 aa  115  6.9999999999999995e-25  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.323499  n/a   
 
 
-
 
NC_013946  Mrub_1393  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
254 aa  115  1.0000000000000001e-24  Meiothermus ruber DSM 1279  Bacteria  normal  0.302994  normal  0.157809 
 
 
-
 
NC_007643  Rru_A3454  binding-protein dependent transport system inner membrane protein  35.02 
 
 
298 aa  114  2.0000000000000002e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3753  binding-protein-dependent transport systems inner membrane component  31.36 
 
 
268 aa  114  3e-24  Jannaschia sp. CCS1  Bacteria  normal  0.333865  normal 
 
 
-
 
NC_013525  Tter_0403  binding-protein-dependent transport systems inner membrane component  30.57 
 
 
271 aa  114  3e-24  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011830  Dhaf_0877  binding-protein-dependent transport systems inner membrane component  31.05 
 
 
260 aa  114  3e-24  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.00000000112184  n/a   
 
 
-
 
NC_013235  Namu_1668  binding-protein-dependent transport systems inner membrane component  31.02 
 
 
288 aa  113  4.0000000000000004e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  0.173855  normal  0.365472 
 
 
-
 
NC_009952  Dshi_2545  binding-protein-dependent transport system protein  32.44 
 
 
287 aa  112  6e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.240068  normal  0.521676 
 
 
-
 
NC_005945  BAS0693  ABC transporter permease  31.02 
 
 
250 aa  111  1.0000000000000001e-23  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0637  ABC transporter, permease  31.02 
 
 
250 aa  111  1.0000000000000001e-23  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013165  Shel_13670  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  31.7 
 
 
249 aa  112  1.0000000000000001e-23  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_0727  ABC transporter permease  31.02 
 
 
250 aa  111  1.0000000000000001e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0363276  n/a   
 
 
-
 
NC_011773  BCAH820_0804  putative ABC transporter, permease protein  31.02 
 
 
250 aa  112  1.0000000000000001e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.22036e-46 
 
 
-
 
NC_014210  Ndas_4504  binding-protein-dependent transport systems inner membrane component  32.58 
 
 
281 aa  111  1.0000000000000001e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0784  putative ABC transporter, permease protein  31.02 
 
 
250 aa  112  1.0000000000000001e-23  Bacillus cereus B4264  Bacteria  normal  0.605831  n/a   
 
 
-
 
NC_005957  BT9727_0637  ABC transporter, permease  31.02 
 
 
250 aa  111  2.0000000000000002e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00537874  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0643  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
251 aa  111  2.0000000000000002e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6052  binding-protein-dependent transport systems inner membrane component  32.71 
 
 
274 aa  111  2.0000000000000002e-23  Variovorax paradoxus S110  Bacteria  normal  0.0454164  n/a   
 
 
-
 
NC_011988  Avi_5406  ABC transporter membrane spanning protein  28.46 
 
 
251 aa  111  2.0000000000000002e-23  Agrobacterium vitis S4  Bacteria  normal  0.408693  n/a   
 
 
-
 
NC_003909  BCE_0797  ABC transporter, permease protein, putative  30.56 
 
 
250 aa  110  3e-23  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_2038  binding-protein-dependent transport systems inner membrane component  32 
 
 
264 aa  110  3e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.697058  normal  0.743835 
 
 
-
 
NC_011658  BCAH187_A0881  putative ABC transporter, permease protein  31.02 
 
 
251 aa  110  3e-23  Bacillus cereus AH187  Bacteria  hitchhiker  0.00328051  n/a   
 
 
-
 
NC_009784  VIBHAR_06840  ABC-type nitrate/sulfonate/bicarbonate transport system permease component  32.88 
 
 
266 aa  110  4.0000000000000004e-23  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011772  BCG9842_B4547  putative ABC transporter, permease protein  31.02 
 
 
251 aa  110  4.0000000000000004e-23  Bacillus cereus G9842  Bacteria  normal  0.113137  normal  0.441246 
 
 
-
 
NC_010172  Mext_1719  binding-protein-dependent transport systems inner membrane component  32 
 
 
264 aa  110  4.0000000000000004e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_3269  binding-protein-dependent transport systems inner membrane component  34.91 
 
 
253 aa  110  5e-23  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.283078  normal 
 
 
-
 
NC_007778  RPB_3099  binding-protein dependent transport system inner membrane protein  37.23 
 
 
261 aa  109  6e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.578785 
 
 
-
 
NC_008254  Meso_0814  binding-protein-dependent transport systems inner membrane component  32.21 
 
 
270 aa  109  6e-23  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000865  hydroxymethylpyrimidine ABC transporter transmembrane component  32.88 
 
 
266 aa  109  8.000000000000001e-23  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3112  binding-protein-dependent transport systems inner membrane component  35.29 
 
 
253 aa  108  9.000000000000001e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0371548 
 
 
-
 
NC_013093  Amir_2627  binding-protein-dependent transport systems inner membrane component  31 
 
 
288 aa  108  1e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  0.752734  n/a   
 
 
-
 
NC_013515  Smon_0476  binding-protein-dependent transport systems inner membrane component  28.33 
 
 
249 aa  108  1e-22  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013223  Dret_2296  binding-protein-dependent transport systems inner membrane component  36.02 
 
 
250 aa  108  1e-22  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3166  ABC transporter, inner membrane subunit  33.6 
 
 
281 aa  107  2e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3093  binding-protein dependent transport system inner membrane protein  29.11 
 
 
259 aa  107  2e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.942666 
 
 
-
 
NC_009720  Xaut_3758  binding-protein-dependent transport systems inner membrane component  31.3 
 
 
256 aa  107  2e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1308  binding-protein-dependent transport systems inner membrane component  37.15 
 
 
254 aa  107  2e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000169849 
 
 
-
 
NC_009012  Cthe_2116  binding-protein-dependent transport systems inner membrane component  26.85 
 
 
253 aa  107  2e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4760  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
267 aa  107  2e-22  Variovorax paradoxus S110  Bacteria  normal  0.318809  n/a   
 
 
-
 
NC_009669  Oant_4580  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
257 aa  107  2e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_3205  binding-protein-dependent transport systems inner membrane component  28.93 
 
 
265 aa  107  2e-22  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.000457845  n/a   
 
 
-
 
NC_009486  Tpet_0435  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
250 aa  107  3e-22  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1095  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
264 aa  107  3e-22  Methylobacterium populi BJ001  Bacteria  normal  0.0240883  normal  0.166534 
 
 
-
 
NC_012791  Vapar_0620  binding-protein-dependent transport systems inner membrane component  33.79 
 
 
258 aa  106  6e-22  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3904  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
281 aa  106  6e-22  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7650  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  36.02 
 
 
247 aa  105  1e-21  Burkholderia sp. 383  Bacteria  normal  0.621765  normal 
 
 
-
 
NC_010623  Bphy_3181  binding-protein-dependent transport systems inner membrane component  32.35 
 
 
277 aa  105  1e-21  Burkholderia phymatum STM815  Bacteria  normal  0.0283642  normal 
 
 
-
 
NC_007951  Bxe_A2015  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  32.6 
 
 
252 aa  105  1e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3871  binding-protein-dependent transport systems inner membrane component  34.58 
 
 
280 aa  105  1e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.208081  n/a   
 
 
-
 
NC_008709  Ping_2376  ABC transporter substrate binding inner membrane protein  30.13 
 
 
265 aa  104  2e-21  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013203  Apar_0391  binding-protein-dependent transport systems inner membrane component  30.63 
 
 
257 aa  104  3e-21  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_0259  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
453 aa  103  3e-21  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_3035  binding-protein-dependent transport systems inner membrane component  31.22 
 
 
256 aa  103  3e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0450  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
222 aa  103  3e-21  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2867  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
277 aa  103  3e-21  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2084  binding-protein-dependent transport systems inner membrane component  33.04 
 
 
260 aa  103  4e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.566245  n/a   
 
 
-
 
NC_009972  Haur_1578  binding-protein-dependent transport systems inner membrane component  33.93 
 
 
274 aa  103  5e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000362296  n/a   
 
 
-
 
NC_013739  Cwoe_2761  binding-protein-dependent transport systems inner membrane component  36.93 
 
 
258 aa  103  6e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.165765  normal  0.0247635 
 
 
-
 
NC_009719  Plav_0891  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
268 aa  102  1e-20  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.223421 
 
 
-
 
NC_009674  Bcer98_0614  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
250 aa  102  1e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_17280  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  33.82 
 
 
325 aa  102  1e-20  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.158115  normal  0.544115 
 
 
-
 
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