| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3552 |
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| Symbol | |
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| ID | 7388816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 2946680 |
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| End bp | 2947537 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643652384 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002550567 |
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| Protein GI | 222149610 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0625026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA AGATTGAAAC AGCAGCCGAC GCTGAAAGCC TGGCCATGCC AAAACAAGGC
CTATTTGCCC GCCACGGCGA AACCGTGCTG CGGGTGCTGA TCCCGTTTGC GGTGGTCGCG
GCTTTGGTGC TGGTCTGGCA TATCGGCGTC ACCGTCTCCG AGGTGCCGCA ATATATCCTG
CCCGGTCCGC TGGCCGTGGC AAAGGCACTC TACACCGATT GGGGAATTCT GGGACCGGCG
CTTTGGGTGA CGACGAAAAT CACTCTGATG TCGCTGGCCC TGGCGCTGAT CGGCGGTGTC
GGCATCGCGG TATTTCTCGT CCAGTCGAAA TGGATTGAAA CCGCTTTCTA TCCGATTGCG
GTCATCCTTC AGGTCACGCC TGTCGTCGCC ATTTCGCCGC TTATCCTGAT CTATGCACCC
TCAACCCAGG TGGCCCTGCT GATCTGCGCC TTTCTGGTCG CTTTCTTCCC AATCCTGTCC
AACATGGTGC AGGGGTTGAA AAGCGTCGAT CATAACCTGC TCAACCTATT CGACCTTTAC
GGCGCCTCAC GGCTGCAAAC GCTGCTCTAT CTGAAACTGC CGGCCTCGCT GCCCTATTTC
ATGACGGGGC TTCGGATCGG TGGCGGTCTG GCGCTGATTG CTGCCGTGGT GGCTGAATTT
GCCGCAGGCT CTGCCGGTGC AGGCTCTGGT CTGGCTTTCC GGCTGCTGGA ATCGCAATTC
CGGCTGAATA TTCCCCGGCT GTTTGCCGCC CTGTTTCTGC TATCGTGCCT CGGCGTGGTG
ATCTTCGCCA TCACCTCCTT CATCTCATGG CTGGCGTTGC ATCGCTGGCA TGAAAGCAGC
ATCAAGCGAG AAAACTGA
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| Protein sequence | MSQKIETAAD AESLAMPKQG LFARHGETVL RVLIPFAVVA ALVLVWHIGV TVSEVPQYIL
PGPLAVAKAL YTDWGILGPA LWVTTKITLM SLALALIGGV GIAVFLVQSK WIETAFYPIA
VILQVTPVVA ISPLILIYAP STQVALLICA FLVAFFPILS NMVQGLKSVD HNLLNLFDLY
GASRLQTLLY LKLPASLPYF MTGLRIGGGL ALIAAVVAEF AAGSAGAGSG LAFRLLESQF
RLNIPRLFAA LFLLSCLGVV IFAITSFISW LALHRWHESS IKREN
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