Gene RPB_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0572 
Symbol 
ID3908265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp644925 
End bp645749 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content69% 
IMG OID637882461 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_484194 
Protein GI86747698 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0627389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.343483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT CCGAGCCGAT CGAATTGCAG CCCGCGCGCC TCGGCGCGGC GCGCCTGCTG 
CGCGTGCTGC TGCCGGTCGT GGTGCTCGCC GCCGGCGTCG CGGCGTGGGA TCTGGTGGTG
CGGCTCAACC AGATCCCGCC TTACATCCTG CCGGGTCCGG GGCTGGTGGC GCAGACGCTG
GTCGCCGATT GGCCGATCCT GTCGGCCTCG CTGCTGGCGA CGCTGGCGAC CACGCTGCAG
GGCTTTCTCG CCGCGGCGAT CGGCGGCATC GCGCTGGCGC TGCTGTTCAA CCAGTCGCGC
TGGGTGGAGT ATTCGCTGTT CCCCTATGCG GTGGTGCTGC AGGTCACGCC GGTGATCGCG
ATCGCGCCGC TACTGCTGAT CTATCTGCCG CAGGACACCG CGGTGGTGGC CTGCGCTTTC
ATCGTCGCGT TCTTTCCGGT GCTCGCCAAC ACCACGCTCG GGCTGAATTC GGTCGATCGC
AATCTCGCTG GGCTGTTCCG GCTGTACGGC GCCTCCCGCT GGCAGACGCT GCTGCGGCTG
AAGCTGCCGG CGGCGCTGCC CTATATGCTC GGCGGCCTGC GCATCGCCGG CGGGCTGTCG
CTGATCGGCG CGGTGGTGGC CGAGATCGCG GCGGGCTCCG CCGGCGCCGG CTCCGGCCTC
GCCTATCGCA TTGCGGAGTC CGGCTACCGG CTCAACATTC CCCGCATGTT CGCCGCCTTG
CTGTTGCTCT CGGCGGCGGG CATTGTCATC TATGCGGCGC TGGCGCTGCT GTCGCATCTG
CTGCTGCGGC GCTGGCACGA AAGTGCGCTC GGAAAGGAAC AATGA
 
Protein sequence
MSESEPIELQ PARLGAARLL RVLLPVVVLA AGVAAWDLVV RLNQIPPYIL PGPGLVAQTL 
VADWPILSAS LLATLATTLQ GFLAAAIGGI ALALLFNQSR WVEYSLFPYA VVLQVTPVIA
IAPLLLIYLP QDTAVVACAF IVAFFPVLAN TTLGLNSVDR NLAGLFRLYG ASRWQTLLRL
KLPAALPYML GGLRIAGGLS LIGAVVAEIA AGSAGAGSGL AYRIAESGYR LNIPRMFAAL
LLLSAAGIVI YAALALLSHL LLRRWHESAL GKEQ