Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0572 |
Symbol | |
ID | 3908265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 644925 |
End bp | 645749 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637882461 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_484194 |
Protein GI | 86747698 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0627389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.343483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAT CCGAGCCGAT CGAATTGCAG CCCGCGCGCC TCGGCGCGGC GCGCCTGCTG CGCGTGCTGC TGCCGGTCGT GGTGCTCGCC GCCGGCGTCG CGGCGTGGGA TCTGGTGGTG CGGCTCAACC AGATCCCGCC TTACATCCTG CCGGGTCCGG GGCTGGTGGC GCAGACGCTG GTCGCCGATT GGCCGATCCT GTCGGCCTCG CTGCTGGCGA CGCTGGCGAC CACGCTGCAG GGCTTTCTCG CCGCGGCGAT CGGCGGCATC GCGCTGGCGC TGCTGTTCAA CCAGTCGCGC TGGGTGGAGT ATTCGCTGTT CCCCTATGCG GTGGTGCTGC AGGTCACGCC GGTGATCGCG ATCGCGCCGC TACTGCTGAT CTATCTGCCG CAGGACACCG CGGTGGTGGC CTGCGCTTTC ATCGTCGCGT TCTTTCCGGT GCTCGCCAAC ACCACGCTCG GGCTGAATTC GGTCGATCGC AATCTCGCTG GGCTGTTCCG GCTGTACGGC GCCTCCCGCT GGCAGACGCT GCTGCGGCTG AAGCTGCCGG CGGCGCTGCC CTATATGCTC GGCGGCCTGC GCATCGCCGG CGGGCTGTCG CTGATCGGCG CGGTGGTGGC CGAGATCGCG GCGGGCTCCG CCGGCGCCGG CTCCGGCCTC GCCTATCGCA TTGCGGAGTC CGGCTACCGG CTCAACATTC CCCGCATGTT CGCCGCCTTG CTGTTGCTCT CGGCGGCGGG CATTGTCATC TATGCGGCGC TGGCGCTGCT GTCGCATCTG CTGCTGCGGC GCTGGCACGA AAGTGCGCTC GGAAAGGAAC AATGA
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Protein sequence | MSESEPIELQ PARLGAARLL RVLLPVVVLA AGVAAWDLVV RLNQIPPYIL PGPGLVAQTL VADWPILSAS LLATLATTLQ GFLAAAIGGI ALALLFNQSR WVEYSLFPYA VVLQVTPVIA IAPLLLIYLP QDTAVVACAF IVAFFPVLAN TTLGLNSVDR NLAGLFRLYG ASRWQTLLRL KLPAALPYML GGLRIAGGLS LIGAVVAEIA AGSAGAGSGL AYRIAESGYR LNIPRMFAAL LLLSAAGIVI YAALALLSHL LLRRWHESAL GKEQ
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