Gene Nwi_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0333 
Symbol 
ID3676162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp374572 
End bp375408 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID637711873 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_316952 
Protein GI75674531 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAC CATCCCCGCC TGCGCCGACC GGCAGCGAGG CATCGGCGCG CGATTCGCTG 
AGGCCGGCGG TGCGTGTGCT GCTGCCGCTC GCGGTGTTGG GCGTCGGCGT TCTCGCGTGG
GACGCGCTCG TGCGCTTCAA GGACATTCCG CCCTATGTGC TGCCGGGCCC GGGCCTGGTG
GCGGCGACGC TGGTGCAGGA CTGGCCGATC CTGTGGCGCT CGCTGCTGAC GACCCTGCTG
ACCACGATGG AGGGCTTTAT CGCCGCCGCC ATCGGCGGCG TCGCGCTCGC GCTGCTGTTC
AACCAGTCGA AATGGCTGGA GCAGGCGCTG TTGCCCTATG CGATCATCCT GCAGGTCACG
CCGGTGATCG CGATTGCGCC GCTGCTTCTG ATCTACCTGC CGCAGCAGAC GGCGGTTGTG
GTTTGCGCCT GGATCGTGGC CTTCTTTCCG GTGCTGTCGA ACACCACGCT CGGCCTCAAT
TCGGTGGATC GCAATCTCGC CGGGCTGTTC CGGCTTTATG GCGCATCGCG GATGCAGACG
CTGCGTTATC TGAAGCTGCC GGCCGCTCTG CCGTACATTC TCGGCGGATT ACGCATCGCC
GGCGGCTTGT CGCTGATCGG CGCGGTGGTT GCTGAAATCG CGGCCGGTTC GGCTGGCGCC
GGCTCGGGCC TCGCCTACCG GATCGCGGAG TCAGGCTACC GGCTCAACAT TCCCCGCATG
TTCGCGGCGC TGCTGTTGCT CTCGGTGGCG GGCATTGTCA TTTATATGTG CCTCGCGGCA
GTATCGCATC TGATGCTGCG GCGCTGGCAT GAAAGCGCGC TCGGGAAGGA AAAATGA
 
Protein sequence
MTSPSPPAPT GSEASARDSL RPAVRVLLPL AVLGVGVLAW DALVRFKDIP PYVLPGPGLV 
AATLVQDWPI LWRSLLTTLL TTMEGFIAAA IGGVALALLF NQSKWLEQAL LPYAIILQVT
PVIAIAPLLL IYLPQQTAVV VCAWIVAFFP VLSNTTLGLN SVDRNLAGLF RLYGASRMQT
LRYLKLPAAL PYILGGLRIA GGLSLIGAVV AEIAAGSAGA GSGLAYRIAE SGYRLNIPRM
FAALLLLSVA GIVIYMCLAA VSHLMLRRWH ESALGKEK