Gene Cagg_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1308 
Symbol 
ID7268599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1608374 
End bp1609138 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content63% 
IMG OID643566151 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002462652 
Protein GI219848219 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000169849 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTACAC CACCCAACCT GGTTCACCGT TTCGTTCCGG CGTTGGCGCT CGGCATCGCG 
CTCTTGGCGG TGCTCGAATG GGGACTACCC GCTGCCGGCA TTCCTGCATA TCTCCTGCCA
CCACCGTCAC GGGTTATCAT CGCGGCTTTA CAGCCAGAAG TTCGCTTAGC CTATCACACC
ATCGCTACGG CCGGCGCCGC ATTGCTCGGC CTTGCCGTCG GTACCCTGAT CAGTTTCATT
GTCGCCGTTG CTTTTCTCTT TTCCCGCCCG CTCGAAGACG CCCTCTACCC GTGGGTCTTG
CTCGGCCAGA GTTTGCCCTC AGTCGCCTTG GCGCCGCTGC TTACCATTTG GCTAGGTGAA
GGGCTTGCGC CCCGCGCAGC AATGGCAGCT CTTTTCGCCG GCTTTCCCCT GCTCATCGCC
ACCATCAGCG GCCTCCGCCG ACCGGCGCCC GAACAATTGG CGATGATGCA AGCGTATGGC
GCGTCACAAT GGCAAATCCT GCGCATGCTA CGCCTACCGG CAGCGTTACC GTTTATCTTC
AGCGGGCTGC GCGTCGCCGG TGCGCTGGCC GTGATCGGCG CACTGGTGAG CGAGCTGGCC
GGTGCCGGCC GTGGGTTGGG CTATCTGATC ACCACCTCGA CCTACCGTTT AGCTACCGAC
CGCGCCTTTG CGGCTGTAGC TGCGGCCGCC GGATTGGCCC TCGCACTGCA CGGTGGTTTC
CTCTGGCTCG AACGCACGAT TGTCTACTGG GAACGTGATC GGTAA
 
Protein sequence
MTTPPNLVHR FVPALALGIA LLAVLEWGLP AAGIPAYLLP PPSRVIIAAL QPEVRLAYHT 
IATAGAALLG LAVGTLISFI VAVAFLFSRP LEDALYPWVL LGQSLPSVAL APLLTIWLGE
GLAPRAAMAA LFAGFPLLIA TISGLRRPAP EQLAMMQAYG ASQWQILRML RLPAALPFIF
SGLRVAGALA VIGALVSELA GAGRGLGYLI TTSTYRLATD RAFAAVAAAA GLALALHGGF
LWLERTIVYW ERDR