Gene RPC_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0572 
Symbol 
ID3970738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp624126 
End bp624956 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content66% 
IMG OID637923689 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_530466 
Protein GI90422096 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CCGGCGAGCC GCAGCGCGAT CGCGAGGCCC GCGGCATCGC GGCGACGCGG 
TTGTTGCAGA TCGCCTTGCC GGCCATTGTG CTGGCGTTGG CGATCGCCGG ATGGCATCTC
GCGGTGCGGC TCAACGACAT TCCGCCTTAT GTGCTTCCCG GACCCGGATT GGTGCTGCGG
ACGCTGATCG CGGATTGGCC GGTGCTGTCG GGCTCATTGC TCACCACGCT GTGGACCACG
CTGGAGGGCT TCGTCGCCGC GGCGATCGGC GGCATCGCGC TGGCGATCCT GTTCAACCAG
TCGCGCTGGC TGGAATTTGC GTTGTTGCCC TATGCGATCA TCCTGCAGGT GACCCCGGTG
ATCGCGATCG CGCCGTTGTT GTTGATCTAT CTGCCGCAGG ACACCGCGGT GATCGCCTGC
GCCTTCATCG TGGCGTTCTT TCCGGTGCTC GCCAACACCA CGCTGGGGTT GAGTTCGGTG
GACCGCAATC TTGCCGGGCT GTTCCGGCTC TATGGCGCGT CGCGCCTGCA GACCCTGCTG
CGGCTGAAGC TGCCGGCGGC ATTGCCGTAT ATCCTGGGCG GGTTGCGGAT CGCCGGCGGG
CTGTCGTTGA TCGGCGCGGT GGTCGCCGAG ATCGCCGCGG GCTCCGCCGG CGCCGGCTCC
GGGCTCGCCT ACCGCATCGC CGAGTCGAGC TACCGGCTCA ACATTCCGCG GATGTTCGCG
GCATTGCTGT TGCTCTCGCT GGCCGGGATT GTCATTTATG GGCTGCTGGC GCTGGTCTCG
CATCTTGCGT TGCGACGCTG GCACGAAAGC GCGCTGGGAA AGGACAATTG A
 
Protein sequence
MSDAGEPQRD REARGIAATR LLQIALPAIV LALAIAGWHL AVRLNDIPPY VLPGPGLVLR 
TLIADWPVLS GSLLTTLWTT LEGFVAAAIG GIALAILFNQ SRWLEFALLP YAIILQVTPV
IAIAPLLLIY LPQDTAVIAC AFIVAFFPVL ANTTLGLSSV DRNLAGLFRL YGASRLQTLL
RLKLPAALPY ILGGLRIAGG LSLIGAVVAE IAAGSAGAGS GLAYRIAESS YRLNIPRMFA
ALLLLSLAGI VIYGLLALVS HLALRRWHES ALGKDN