Gene Mvan_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_3142 
Symbol 
ID4646374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp3337702 
End bp3338496 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID639806619 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_953950 
Protein GI120404121 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.32312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0411868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAC GCCGGATCGT GTCGCTGGCG GGGCCGCCGA TGGCACTGCT GGCGGTGGTG 
ATCGTCGCCT GGTACGCCGT CAGTTACCTG GTGCTCGACA GCAGCGAGAA GTTCCTGCTG
CCCCCGCCCC ACGACGTCGT GGCGCAGGGA CTGCTCGACG CCGACACCCG CGACGACATC
ACCAGCGCAC TGTGGGTGTC GGCGAAGGTG GCGATCATCG GGCTGGTCGC CGCGATCGTG
ATCGGTGGAG TTCTCGCGGT CGCCATGGCG CAGGCGAAAT GGGTCGAACG CTCGCTGTAC
CCGTGGGTGA TCCTGCTGCA GACGGTTCCG ATCCTGGCCA TCGTGCCGGT GATCGGCTTC
TGGTTCGGGT TCGAGCTGTT CGCCCGCGTC CTCGTCGTCG TGATCATCGC CCTGTTCCCG
CTGATCATCA ACCCGCTGCA GGGTCTGCTG GGCGCCGACC GCGGCCTGCA CGACCTGTTC
ACCCTGACCG GCGCGCGCCC GTTGACGCGG CTGCTGAAGC TGCAGATCCC GTCGGCCATG
CCGGATGTCT TCGTCGGCCT GCAGAGCGCC GCCGGACTGG CGGTGGTCGG CGCGACGGTC
GGTGACTACT TCTTCGGGCG CGGGCAGATC GGGTTGGGCA TGCTGCTGGC CCGGTACAGC
TCCCGGCTGC AGTCCGCCGA GATGCTGGCC ACCGTCCTCA CGGCCTGTCT GCTCGGCGTC
GTCGCATTCT GGATCTTCGG CGCGCTCGGC CGCCGGATCG TCGGCAGATG GTCACCTGCG
TGGGGGGCGC GCTAG
 
Protein sequence
MTARRIVSLA GPPMALLAVV IVAWYAVSYL VLDSSEKFLL PPPHDVVAQG LLDADTRDDI 
TSALWVSAKV AIIGLVAAIV IGGVLAVAMA QAKWVERSLY PWVILLQTVP ILAIVPVIGF
WFGFELFARV LVVVIIALFP LIINPLQGLL GADRGLHDLF TLTGARPLTR LLKLQIPSAM
PDVFVGLQSA AGLAVVGATV GDYFFGRGQI GLGMLLARYS SRLQSAEMLA TVLTACLLGV
VAFWIFGALG RRIVGRWSPA WGAR