Gene Veis_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3145 
Symbol 
ID4690289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3496574 
End bp3497470 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content67% 
IMG OID639850903 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_997894 
Protein GI121610087 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.433007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.243208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGGG CATCGATCAC TGAGCCGGCC GATCTGGCGG CTGCGGGGCC TGCCGGGGCC 
GCGCCGGGCG CGCATGAAGA CCGGTTGCGC GCGCACCAGG AGCGGCAACG CCGGAGCGCA
GCCATGCTGC GCCTGGTCGT GCCCGTGGTC ATCGTGGCGT TGCTGCTGCT GCTGTGGGAA
TGGCTGGTGC GCGCCCACCG CATTCCGCAC TACATCCTGC CCGCGCCGTC GCTGATCCTG
CGCACGCTGT TTGAACATTG GGATTCGCTG TCGAGCGCGC TGTGGTTCAC GGTCAGGCTC
ACGCTGCTGG CGCTGGCCGC CGCCATCGTC GGCGGCGTGC TGCTGGCGAT TGCGTTCGCG
TTGTTCAAGT GGGTGGAGAT CGGCCTGTTC CCGATCGCGG TGATCCTGCA GGTGACGCCC
ATCATCGCCA TCGCGCCGCT GATCCTGATC TATGTGCCGA ACACCACGGC GGCCTTGCTG
CTGTGCGCCT GGATCGTGGC CTTTTTTCCG ATCCTGTCGA ACACCGTGAT CGGCCTGAAA
AGCGCGGACC GCAATCTGCG CGACCTGTTC TGGCTCTACC GGGCCTCGCC GTGGCAGACC
TTTCGCTACC TGCTCGCGCC GAGCGCGCTG CCGTACTTCA TGGCGGGCCT GAAGATCGCC
GGCGGCCTGA GCCTGATCGG CGCGGTGGTG GCCGAGTTCA CCGCCGGCAC GGCGGGCAAG
GAAACGGGGC TGGCCTCGCG CATTCTCGAA TCGAGCTTTC GCACCGAGAT TCCGATGATG
TTCGCGGCGC TGCTGCTGGT GTCGCTGCTG GGCATCGTGA TCTTCGTCTT GTTCGCCGCG
CTGTCGCGCC TGGTGCTCGG CCACTGGCAT GAAAGCGAGA TGCAGCATGA ACGCTAA
 
Protein sequence
MAWASITEPA DLAAAGPAGA APGAHEDRLR AHQERQRRSA AMLRLVVPVV IVALLLLLWE 
WLVRAHRIPH YILPAPSLIL RTLFEHWDSL SSALWFTVRL TLLALAAAIV GGVLLAIAFA
LFKWVEIGLF PIAVILQVTP IIAIAPLILI YVPNTTAALL LCAWIVAFFP ILSNTVIGLK
SADRNLRDLF WLYRASPWQT FRYLLAPSAL PYFMAGLKIA GGLSLIGAVV AEFTAGTAGK
ETGLASRILE SSFRTEIPMM FAALLLVSLL GIVIFVLFAA LSRLVLGHWH ESEMQHER