More than 300 homologs were found in PanDaTox collection
for query gene Dfer_5727 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_5727  two component transcriptional regulator, LuxR family  100 
 
 		 212 aa  434  1e-121  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.412106 
 
 
-
 
NC_011891  A2cp1_2172  two component transcriptional regulator, LuxR family  31.58 
 
 		 210 aa  112  5e-24  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  30.1 
 
 		 215 aa  111  7.000000000000001e-24  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_009441  Fjoh_4664  two component LuxR family transcriptional regulator  31.13 
 
 		 219 aa  110  1.0000000000000001e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_2078  two component transcriptional regulator, LuxR family  30.95 
 
 		 210 aa  110  2.0000000000000002e-23  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_2253  two component transcriptional regulator, LuxR family  30.1 
 
 		 216 aa  110  2.0000000000000002e-23  Geobacter bemidjiensis Bem  Bacteria  normal  0.174263  n/a   
 
 
-
 
NC_007760  Adeh_1762  two component LuxR family transcriptional regulator  30.33 
 
 		 210 aa  109  4.0000000000000004e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  29.13 
 
 		 215 aa  107  1e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  30.77 
 
 		 214 aa  107  1e-22  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_007404  Tbd_2237  two component LuxR family transcriptional regulator  30.29 
 
 		 211 aa  106  2e-22  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007517  Gmet_2158  two component LuxR family transcriptional regulator  28.16 
 
 		 210 aa  106  3e-22  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0301144 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  30.29 
 
 		 215 aa  105  4e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  31.1 
 
 		 216 aa  105  4e-22  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  30.29 
 
 		 215 aa  105  4e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  29.61 
 
 		 215 aa  105  5e-22  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  32.21 
 
 		 213 aa  105  6e-22  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  29.33 
 
 		 215 aa  105  6e-22  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  29.61 
 
 		 215 aa  105  7e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  29.61 
 
 		 215 aa  105  7e-22  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal  1 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  30.81 
 
 		 221 aa  104  8e-22  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  28.85 
 
 		 215 aa  104  1e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  28.43 
 
 		 212 aa  104  1e-21  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  28.85 
 
 		 215 aa  104  1e-21  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  31.22 
 
 		 207 aa  103  2e-21  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  31.4 
 
 		 216 aa  103  2e-21  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  30.77 
 
 		 211 aa  103  2e-21  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  31.86 
 
 		 212 aa  103  2e-21  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_009997  Sbal195_2246  two component LuxR family transcriptional regulator  29.33 
 
 		 214 aa  102  3e-21  Shewanella baltica OS195  Bacteria  normal  0.0703025  hitchhiker  0.00413313 
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  32.85 
 
 		 212 aa  102  3e-21  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  28.37 
 
 		 215 aa  102  3e-21  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal  1 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  30.19 
 
 		 216 aa  102  3e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  29.67 
 
 		 222 aa  102  6e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  32.04 
 
 		 210 aa  102  6e-21  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  32.04 
 
 		 210 aa  102  6e-21  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  29.61 
 
 		 215 aa  101  7e-21  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  30.48 
 
 		 213 aa  101  8e-21  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  31.07 
 
 		 210 aa  101  8e-21  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_4067  two component LuxR family transcriptional regulator  28.64 
 
 		 233 aa  101  8e-21  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.836498  normal  0.141664 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  27.18 
 
 		 210 aa  101  9e-21  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  30.58 
 
 		 239 aa  100  1e-20  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  29.41 
 
 		 212 aa  100  1e-20  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  30.24 
 
 		 207 aa  100  1e-20  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  27.67 
 
 		 210 aa  100  1e-20  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  29.13 
 
 		 220 aa  100  1e-20  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  30.24 
 
 		 207 aa  100  1e-20  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  28.78 
 
 		 207 aa  101  1e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  30.58 
 
 		 210 aa  100  1e-20  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_008789  Hhal_0023  two component LuxR family transcriptional regulator  29.61 
 
 		 216 aa  100  1e-20  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  28.1 
 
 		 221 aa  100  2e-20  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  32.21 
 
 		 209 aa  100  2e-20  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  26.51 
 
 		 238 aa  100  2e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  29.13 
 
 		 215 aa  100  2e-20  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  29.13 
 
 		 215 aa  100  2e-20  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  28.44 
 
 		 216 aa  100  2e-20  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  29.13 
 
 		 282 aa  100  2e-20  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_1565  two component transcriptional regulator, LuxR family  29.86 
 
 		 214 aa  100  2e-20  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  29.13 
 
 		 215 aa  100  2e-20  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  29.13 
 
 		 215 aa  100  2e-20  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  29.13 
 
 		 215 aa  99.8  2e-20  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_010552  BamMC406_3499  two component LuxR family transcriptional regulator  29.23 
 
 		 203 aa  100  2e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00551314 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  28.77 
 
 		 214 aa  100  2e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  29.81 
 
 		 214 aa  100  2e-20  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  31.46 
 
 		 219 aa  99.4  3e-20  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  28.1 
 
 		 226 aa  99.8  3e-20  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  31.37 
 
 		 223 aa  99.8  3e-20  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  28.23 
 
 		 214 aa  99.8  3e-20  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  30.43 
 
 		 220 aa  99.4  3e-20  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  28.37 
 
 		 211 aa  99.4  3e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  29.63 
 
 		 232 aa  99.4  4e-20  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_010557  BamMC406_6196  two component LuxR family transcriptional regulator  28.02 
 
 		 215 aa  99  4e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  0.280791  normal  0.522243 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  30.58 
 
 		 206 aa  99.4  4e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_1943  two component LuxR family transcriptional regulator  29.81 
 
 		 214 aa  99.4  4e-20  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  29.33 
 
 		 235 aa  99  5e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  31.58 
 
 		 226 aa  99  5e-20  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007651  BTH_I1849  DNA-binding response regulator NarL  26.67 
 
 		 233 aa  98.6  6e-20  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_010087  Bmul_5903  two component LuxR family transcriptional regulator  28.23 
 
 		 215 aa  98.6  6e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.68975  normal  0.398777 
 
 
-
 
NC_008752  Aave_4382  two component LuxR family transcriptional regulator  31.1 
 
 		 209 aa  98.6  6e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  28.99 
 
 		 215 aa  98.6  7e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  28.5 
 
 		 215 aa  98.2  9e-20  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_008781  Pnap_0922  two component LuxR family transcriptional regulator  31.55 
 
 		 210 aa  97.4  1e-19  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.114328  normal  1 
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  28.99 
 
 		 219 aa  97.4  1e-19  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2571  transmission activator LetA  28.99 
 
 		 219 aa  97.4  1e-19  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  27.18 
 
 		 210 aa  97.4  1e-19  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  26.32 
 
 		 222 aa  97.4  1e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  27.18 
 
 		 210 aa  97.4  1e-19  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  29.61 
 
 		 210 aa  97.8  1e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_009523  RoseRS_4323  two component LuxR family transcriptional regulator  31.94 
 
 		 246 aa  96.7  2e-19  Roseiflexus sp. RS-1  Bacteria  normal  0.239635  normal  0.317944 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  27.18 
 
 		 210 aa  97.1  2e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008836  BMA10229_A3072  DNA-binding response regulator NarL  26.22 
 
 		 233 aa  96.7  2e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA1736  DNA-binding response regulator NarL  26.22 
 
 		 233 aa  96.7  2e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  28.5 
 
 		 215 aa  96.7  2e-19  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2246  DNA-binding response regulator NarL  26.22 
 
 		 233 aa  96.7  2e-19  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_1519  DNA-binding response regulator NarL  26.22 
 
 		 233 aa  96.7  2e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  0.281442  n/a   
 
 
-
 
NC_009076  BURPS1106A_2686  nitrate/nitrite response regulator protein NarL  26.22 
 
 		 233 aa  96.7  2e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  28.71 
 
 		 213 aa  96.7  2e-19  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  28.22 
 
 		 213 aa  97.1  2e-19  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_010622  Bphy_0097  two component LuxR family transcriptional regulator  29.13 
 
 		 218 aa  97.1  2e-19  Burkholderia phymatum STM815  Bacteria  normal  0.605108  normal  1 
 
 
-
 
NC_010625  Bphy_5813  two component LuxR family transcriptional regulator  28.17 
 
 		 215 aa  97.1  2e-19  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.118405 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  28.91 
 
 		 219 aa  96.7  2e-19  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_009074  BURPS668_2630  nitrate/nitrite response regulator protein NarL  26.22 
 
 		 233 aa  96.7  2e-19  Burkholderia pseudomallei 668  Bacteria  normal  0.14617  n/a   
 
 
-
 
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