| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5727 |
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| Symbol | |
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| ID | 8229343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6882607 |
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| End bp | 6883245 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644933572 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003090080 |
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| Protein GI | 255039459 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.412106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATATAG TTTTAGTCGA CGAGCATTTT CTGTTGGTAG ATGCTCTGCA AAACCTTTTG
AAATCGATGC CGGAAGTCAG CGACGTGGAC ATTTATACCG ATGGCAAAGA GTTTATTGCT
GAACGCGCCG CGCACCCGCC GGACATCCTT GTCATGGACC TCGCGCTGAA TGGCATGAAC
AGTATCGAAC TGCTGGATAT CTGCCGCAGT ACGCTGCCGA GCGAAATGAA GATCATCGTG
CTGTCGGCAG TTACCGACGC CCAGACGGTC AAACACACGA TCCGCCGGGG CGCCAATAGC
TTTCTGTCAA AATCGACGGC ATTGGAAGAA TTCCTGGAAT CGATTTTTCA GGTGTACAAG
GGCAAGCAAT ACATCGGGCG TTCCATCCGC GAAAGTCTGG TCAACAGTGT TTTTTCGGAA
GAAGAAGTTG TGCTGCACCT TTCACCGCGC GAAAAGCAGG TGCTGCGTAA GGTATGCAGC
GGACATACGA TCAAGGAGAT TGCCTACGAA CTGAAACTGA GCACCCACAC CGTGCAGTAT
TATCACCGGA GTGTGATGGA TAAATTGAAG GTCCGCCGCA CGACCGACCT CATCGTGTAC
GCCATGCAGC ACGGCCTGTA TATCCCGGAA GCCAGGTAG
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| Protein sequence | MDIVLVDEHF LLVDALQNLL KSMPEVSDVD IYTDGKEFIA ERAAHPPDIL VMDLALNGMN
SIELLDICRS TLPSEMKIIV LSAVTDAQTV KHTIRRGANS FLSKSTALEE FLESIFQVYK
GKQYIGRSIR ESLVNSVFSE EEVVLHLSPR EKQVLRKVCS GHTIKEIAYE LKLSTHTVQY
YHRSVMDKLK VRRTTDLIVY AMQHGLYIPE AR
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