More than 300 homologs were found in PanDaTox collection
for query gene Snas_0178 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0178  two component transcriptional regulator, LuxR family  100 
 
 
221 aa  434  1e-121  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  56.13 
 
 
230 aa  226  2e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.77 
 
 
222 aa  205  5e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  51.42 
 
 
214 aa  204  8e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  52.13 
 
 
215 aa  202  2e-51  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  53.77 
 
 
228 aa  202  4e-51  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  50.7 
 
 
227 aa  201  7e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013595  Sros_8799  response regulator receiver protein  54.21 
 
 
227 aa  199  1.9999999999999998e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.755207  normal 
 
 
-
 
NC_013739  Cwoe_5656  two component transcriptional regulator, LuxR family  55.19 
 
 
222 aa  199  1.9999999999999998e-50  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1125  two component transcriptional regulator, LuxR family  54.95 
 
 
229 aa  198  7e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.306134 
 
 
-
 
NC_014165  Tbis_0951  LuxR family two component transcriptional regulator  51.44 
 
 
221 aa  197  9e-50  Thermobispora bispora DSM 43833  Bacteria  normal  0.392411  normal  0.343359 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  50.7 
 
 
226 aa  196  2.0000000000000003e-49  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_014210  Ndas_4417  two component transcriptional regulator, LuxR family  53.33 
 
 
232 aa  195  5.000000000000001e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0822  two component transcriptional regulator, LuxR family  52.75 
 
 
229 aa  194  6e-49  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2689  two component transcriptional regulator, LuxR family  55.19 
 
 
223 aa  194  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.364406  normal  0.346923 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  54.76 
 
 
220 aa  192  3e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal 
 
 
-
 
NC_008699  Noca_1318  response regulator receiver  49.08 
 
 
225 aa  192  5e-48  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  51.16 
 
 
218 aa  191  8e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  47.09 
 
 
233 aa  191  9e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  49.53 
 
 
239 aa  190  1e-47  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1603  two component LuxR family transcriptional regulator  54.25 
 
 
245 aa  190  1e-47  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0252513 
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  47.89 
 
 
216 aa  189  4e-47  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  50.46 
 
 
218 aa  188  5.999999999999999e-47  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  53.15 
 
 
241 aa  187  9e-47  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  47.66 
 
 
226 aa  187  9e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  48.6 
 
 
228 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal 
 
 
-
 
NC_013131  Caci_0683  two component transcriptional regulator, LuxR family  45.33 
 
 
234 aa  187  1e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.344925  normal 
 
 
-
 
NC_013757  Gobs_1986  two component transcriptional regulator, LuxR family  49.3 
 
 
226 aa  187  1e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01320  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.27 
 
 
261 aa  187  1e-46  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  49.53 
 
 
218 aa  186  2e-46  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  46.98 
 
 
230 aa  186  3e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_013530  Xcel_2601  two component transcriptional regulator, LuxR family  49.53 
 
 
234 aa  186  3e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.1212  n/a   
 
 
-
 
NC_013510  Tcur_0110  two component transcriptional regulator, LuxR family  49.32 
 
 
222 aa  186  4e-46  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.95 
 
 
230 aa  185  5e-46  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  52.38 
 
 
220 aa  185  6e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_013530  Xcel_0759  two component transcriptional regulator, LuxR family  50.7 
 
 
221 aa  185  6e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.174089  n/a   
 
 
-
 
NC_013204  Elen_2822  two component transcriptional regulator, LuxR family  47.96 
 
 
228 aa  184  7e-46  Eggerthella lenta DSM 2243  Bacteria  normal  0.0415698  normal  0.590713 
 
 
-
 
NC_009380  Strop_0395  two component LuxR family transcriptional regulator  51.42 
 
 
217 aa  184  7e-46  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  46.51 
 
 
215 aa  184  9e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_013739  Cwoe_4855  two component transcriptional regulator, LuxR family  48.9 
 
 
244 aa  184  9e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.093919  normal 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  48.36 
 
 
219 aa  184  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  50.7 
 
 
213 aa  184  1.0000000000000001e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_04500  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.14 
 
 
244 aa  183  2.0000000000000003e-45  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  48.83 
 
 
224 aa  183  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  47.44 
 
 
224 aa  182  3e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009664  Krad_4217  two component transcriptional regulator, LuxR family  51.17 
 
 
225 aa  182  4.0000000000000006e-45  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.000816589  normal  0.757819 
 
 
-
 
NC_013947  Snas_4662  two component transcriptional regulator, LuxR family  46.73 
 
 
221 aa  180  1e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.142047  hitchhiker  0.00679998 
 
 
-
 
NC_013595  Sros_4219  response regulator receiver protein  52.86 
 
 
217 aa  180  1e-44  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.0092025  hitchhiker  0.000784643 
 
 
-
 
NC_013947  Snas_1740  two component transcriptional regulator, LuxR family  47.66 
 
 
228 aa  179  2.9999999999999997e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  48.44 
 
 
234 aa  179  2.9999999999999997e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal 
 
 
-
 
NC_009921  Franean1_3846  two component LuxR family transcriptional regulator  48.36 
 
 
249 aa  179  2.9999999999999997e-44  Frankia sp. EAN1pec  Bacteria  normal  0.525033  normal  0.770826 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  49.53 
 
 
225 aa  179  4e-44  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  48.1 
 
 
215 aa  179  4e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_008541  Arth_4134  two component LuxR family transcriptional regulator  42.74 
 
 
250 aa  178  4.999999999999999e-44  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  46.61 
 
 
223 aa  178  4.999999999999999e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_009664  Krad_1998  two component transcriptional regulator, LuxR family  48.36 
 
 
225 aa  178  4.999999999999999e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.12496  normal 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  47.42 
 
 
219 aa  178  5.999999999999999e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  48.13 
 
 
224 aa  178  7e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  46.76 
 
 
221 aa  177  9e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal 
 
 
-
 
NC_013595  Sros_4672  response regulator receiver protein  49.02 
 
 
212 aa  177  9e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.223352  normal  0.339353 
 
 
-
 
NC_014210  Ndas_2780  two component transcriptional regulator, LuxR family  49.53 
 
 
219 aa  177  1e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.855193  normal  0.402473 
 
 
-
 
NC_013521  Sked_08490  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.8 
 
 
236 aa  177  1e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199706  normal  0.526513 
 
 
-
 
NC_013093  Amir_6405  two component transcriptional regulator, LuxR family  46.82 
 
 
225 aa  176  2e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  46.58 
 
 
229 aa  176  2e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  50 
 
 
222 aa  176  2e-43  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_013441  Gbro_4119  response regulator receiver  44.7 
 
 
230 aa  176  4e-43  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1746  response regulator receiver protein  48.57 
 
 
217 aa  175  4e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.59096  normal  0.157721 
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  47.85 
 
 
225 aa  175  5e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  46.54 
 
 
230 aa  174  6e-43  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.0025253 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  48.34 
 
 
220 aa  175  6e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  50 
 
 
225 aa  174  7e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  46.48 
 
 
227 aa  174  8e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  45.79 
 
 
219 aa  174  8e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal 
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  49.04 
 
 
213 aa  174  8e-43  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_007333  Tfu_1403  LuxR response regulator receiver  47.8 
 
 
214 aa  174  9.999999999999999e-43  Thermobifida fusca YX  Bacteria  normal  0.676683  n/a   
 
 
-
 
NC_013235  Namu_0544  two component transcriptional regulator, LuxR family  46.19 
 
 
215 aa  174  9.999999999999999e-43  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5068  two component transcriptional regulator, LuxR family  49.53 
 
 
220 aa  174  9.999999999999999e-43  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.708369  normal 
 
 
-
 
NC_013739  Cwoe_0549  two component transcriptional regulator, LuxR family  46.92 
 
 
220 aa  174  9.999999999999999e-43  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  47.37 
 
 
218 aa  174  9.999999999999999e-43  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  46.92 
 
 
234 aa  173  1.9999999999999998e-42  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  48.33 
 
 
223 aa  173  1.9999999999999998e-42  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013595  Sros_4577  response regulator receiver protein  43.72 
 
 
223 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.172592 
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  45.45 
 
 
219 aa  173  1.9999999999999998e-42  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_014151  Cfla_2391  two component transcriptional regulator, LuxR family  47.44 
 
 
239 aa  173  1.9999999999999998e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0696687  hitchhiker  0.00128542 
 
 
-
 
NC_013739  Cwoe_0676  two component transcriptional regulator, LuxR family  47.14 
 
 
215 aa  172  2.9999999999999996e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3387  two component transcriptional regulator, LuxR family  46.82 
 
 
223 aa  172  2.9999999999999996e-42  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.0000386408  hitchhiker  0.000570848 
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  47.87 
 
 
211 aa  172  3.9999999999999995e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  48.58 
 
 
221 aa  172  3.9999999999999995e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2469  two component transcriptional regulator, LuxR family  49.53 
 
 
229 aa  172  3.9999999999999995e-42  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000889267  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  48.6 
 
 
216 aa  171  5.999999999999999e-42  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013521  Sked_26900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.12 
 
 
247 aa  171  5.999999999999999e-42  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00793239  normal  0.935402 
 
 
-
 
NC_014210  Ndas_1972  two component transcriptional regulator, LuxR family  45.98 
 
 
217 aa  171  5.999999999999999e-42  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000794288  unclonable  0.0000000332591 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  47.12 
 
 
225 aa  171  5.999999999999999e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  46.08 
 
 
230 aa  171  6.999999999999999e-42  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  49.53 
 
 
221 aa  171  6.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  47.32 
 
 
225 aa  171  9e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.176655 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  44.34 
 
 
225 aa  170  1e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  46.92 
 
 
220 aa  171  1e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.62 
 
 
219 aa  171  1e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.263807 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  45.62 
 
 
241 aa  170  1e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>