More than 300 homologs were found in PanDaTox collection
for query gene Slin_0750 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_0750  response regulator receiver protein  100 
 
 
124 aa  254  3e-67  Spirosoma linguale DSM 74  Bacteria  normal  0.55496  normal 
 
 
-
 
NC_013132  Cpin_0986  response regulator receiver protein  42.48 
 
 
143 aa  99  2e-20  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2890  response regulator receiver protein  42.62 
 
 
132 aa  78.2  0.00000000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_3234  two component Fis family transcriptional regulator  38.83 
 
 
475 aa  77.4  0.00000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS00402  putative two component response regulator transcription regulator protein  37.62 
 
 
221 aa  77  0.00000000000008  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00497843  normal 
 
 
-
 
NC_009439  Pmen_1831  two component transcriptional regulator  35.65 
 
 
225 aa  72.8  0.000000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.989444  normal  0.522163 
 
 
-
 
NC_009943  Dole_0868  two component, sigma54 specific, Fis family transcriptional regulator  31.78 
 
 
475 aa  71.2  0.000000000004  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1988  two component, sigma54 specific, transcriptional regulator, Fis family  37.5 
 
 
509 aa  70.9  0.000000000005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4687  two component transcriptional regulator, winged helix family  34.65 
 
 
221 aa  70.9  0.000000000006  Ralstonia pickettii 12J  Bacteria  normal  normal  0.195761 
 
 
-
 
NC_012857  Rpic12D_3610  two component transcriptional regulator, winged helix family  34.65 
 
 
221 aa  70.9  0.000000000006  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009429  Rsph17025_3680  histidine kinase A domain-containing protein  38.24 
 
 
220 aa  70.5  0.000000000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.894604 
 
 
-
 
NC_003910  CPS_3305  DNA-binding response regulator BaeR  38.6 
 
 
232 aa  69.7  0.00000000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.304306  n/a   
 
 
-
 
NC_007494  RSP_3430  transcriptional regulator  34.21 
 
 
221 aa  69.7  0.00000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.325979  n/a   
 
 
-
 
NC_009483  Gura_2708  two component, sigma-54 specific, Fis family transcriptional regulator  31.53 
 
 
468 aa  69.7  0.00000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0866  two component, sigma54 specific, Fis family transcriptional regulator  33.88 
 
 
496 aa  69.7  0.00000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.555974  normal  0.133337 
 
 
-
 
NC_009050  Rsph17029_3075  two component transcriptional regulator  34.21 
 
 
220 aa  69.7  0.00000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.0867071  normal  0.535547 
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  32.48 
 
 
234 aa  68.9  0.00000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_009616  Tmel_1824  two component transcriptional regulator  37.04 
 
 
222 aa  68.9  0.00000000002  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0664  two component transcriptional regulator  33.33 
 
 
237 aa  68.9  0.00000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  32.48 
 
 
234 aa  68.9  0.00000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3026  signal transduction histidine kinase, nitrogen specific, NtrB  37.17 
 
 
819 aa  68.9  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.956622  normal 
 
 
-
 
NC_009439  Pmen_0965  two-component response regulator PilR  37.61 
 
 
446 aa  69.3  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.25964  normal 
 
 
-
 
NC_009784  VIBHAR_04992  positive response regulator for pho regulon  33.96 
 
 
256 aa  68.2  0.00000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013061  Phep_2454  transcriptional regulator domain protein  33.33 
 
 
224 aa  68.6  0.00000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  0.02572  normal  0.811367 
 
 
-
 
NC_011992  Dtpsy_2940  two component, sigma54 specific, transcriptional regulator, Fis family  32.54 
 
 
502 aa  68.6  0.00000000003  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1503  two component, sigma54 specific, Fis family transcriptional regulator  31.82 
 
 
513 aa  68.6  0.00000000003  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3630  two component, sigma54 specific, Fis family transcriptional regulator  32.54 
 
 
502 aa  68.6  0.00000000003  Acidovorax sp. JS42  Bacteria  normal  0.670707  normal 
 
 
-
 
NC_008752  Aave_3274  two component transcriptional regulator  31.15 
 
 
230 aa  67.8  0.00000000004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.644217  normal  0.18395 
 
 
-
 
NC_011769  DvMF_1859  putative two component, sigma54 specific, transcriptional regulator, Fis family  31.9 
 
 
499 aa  67.8  0.00000000005  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013457  VEA_001205  DNA-binding response regulator  32.08 
 
 
243 aa  67.8  0.00000000005  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0717  two component transcriptional regulator, winged helix family  34.31 
 
 
226 aa  67.8  0.00000000005  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.000154116  n/a   
 
 
-
 
NC_009668  Oant_3252  two component transcriptional regulator  35.96 
 
 
220 aa  67.8  0.00000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2724  response regulator receiver domain-containing protein  35.4 
 
 
230 aa  67.8  0.00000000005  Saccharophagus degradans 2-40  Bacteria  normal  0.480114  normal 
 
 
-
 
NC_007954  Sden_0234  response regulator receiver  32.48 
 
 
221 aa  67.8  0.00000000005  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2937  sigma-54 factor interaction domain-containing protein  34.78 
 
 
524 aa  67.4  0.00000000006  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.726194  n/a   
 
 
-
 
NC_008781  Pnap_3383  two component, sigma54 specific, Fis family transcriptional regulator  33.86 
 
 
475 aa  67.4  0.00000000006  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.542066  normal 
 
 
-
 
NC_010718  Nther_0252  response regulator receiver protein  35.59 
 
 
239 aa  67.4  0.00000000006  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.114255 
 
 
-
 
NC_002620  TC0753  sigma-54 dependent response regulator  31.15 
 
 
387 aa  67  0.00000000007  Chlamydia muridarum Nigg  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1299  two component transcriptional regulator, winged helix family  36.89 
 
 
242 aa  67.4  0.00000000007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0317425  normal  0.569469 
 
 
-
 
NC_008531  LEUM_0585  DNA-binding response regulator  35.09 
 
 
230 aa  67.4  0.00000000007  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00125793  n/a   
 
 
-
 
NC_008751  Dvul_0349  two component, sigma54 specific, Fis family transcriptional regulator  31.03 
 
 
472 aa  67  0.00000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.809759 
 
 
-
 
NC_013889  TK90_2124  two component, sigma54 specific, transcriptional regulator, Fis family  35.04 
 
 
474 aa  67  0.00000000009  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0345179 
 
 
-
 
NC_013440  Hoch_5854  two component, sigma54 specific, transcriptional regulator, Fis family  36.89 
 
 
466 aa  67  0.00000000009  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU3217  sigma-54 dependent DNA-binding response regulator  32.79 
 
 
501 aa  66.6  0.0000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  31.62 
 
 
236 aa  66.2  0.0000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_011071  Smal_0287  two component transcriptional regulator, winged helix family  35.45 
 
 
237 aa  66.6  0.0000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0371836  normal  0.118342 
 
 
-
 
NC_007498  Pcar_0259  two component signal transduction response regulator  36.63 
 
 
513 aa  66.2  0.0000000001  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2067  two component transcriptional regulator, winged helix family  33.33 
 
 
233 aa  66.6  0.0000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000016314  n/a   
 
 
-
 
NC_011901  Tgr7_0312  response regulator receiver protein  37.3 
 
 
457 aa  66.6  0.0000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.831765  n/a   
 
 
-
 
NC_007908  Rfer_3345  two component, sigma54 specific, Fis family transcriptional regulator  33.03 
 
 
483 aa  66.2  0.0000000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3029  two component transcriptional regulator  31.86 
 
 
238 aa  66.6  0.0000000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.452516  normal 
 
 
-
 
NC_013739  Cwoe_0720  two component transcriptional regulator, winged helix family  34.55 
 
 
224 aa  66.6  0.0000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_3739  two component transcriptional regulator, winged helix family  29.82 
 
 
266 aa  66.2  0.0000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.453489  normal  0.0202921 
 
 
-
 
NC_010322  PputGB1_1011  two component transcriptional regulator  33.87 
 
 
241 aa  65.5  0.0000000002  Pseudomonas putida GB-1  Bacteria  normal  0.675078  normal 
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  36.28 
 
 
494 aa  65.9  0.0000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4373  two component transcriptional regulator  33.06 
 
 
243 aa  65.5  0.0000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0852  GAF sensor hybrid histidine kinase  30.97 
 
 
1055 aa  65.9  0.0000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0199  two component, sigma54 specific, transcriptional regulator, Fis family  31.58 
 
 
451 aa  65.5  0.0000000002  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.940712  n/a   
 
 
-
 
NC_008340  Mlg_0669  response regulator receiver protein  33.04 
 
 
123 aa  65.5  0.0000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  35.14 
 
 
430 aa  65.9  0.0000000002  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0319  response regulator receiver protein  30.25 
 
 
538 aa  65.5  0.0000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  31.19 
 
 
137 aa  65.1  0.0000000003  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_0130  two component transcriptional regulator, winged helix family  31.07 
 
 
224 aa  65.1  0.0000000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00147609  n/a   
 
 
-
 
NC_007958  RPD_4243  response regulator receiver  34.31 
 
 
219 aa  65.1  0.0000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.376113 
 
 
-
 
NC_013947  Snas_4900  two component transcriptional regulator, winged helix family  34.62 
 
 
221 aa  65.1  0.0000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.196174  normal 
 
 
-
 
NC_009439  Pmen_0794  two component transcriptional regulator  36.11 
 
 
232 aa  65.5  0.0000000003  Pseudomonas mendocina ymp  Bacteria  normal  0.665518  normal 
 
 
-
 
NC_012034  Athe_1885  response regulator receiver protein  33.62 
 
 
1066 aa  65.1  0.0000000003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.166704  n/a   
 
 
-
 
NC_008709  Ping_1245  two component, sigma54 specific, transcriptional regulator, Fis family protein  34.86 
 
 
472 aa  65.1  0.0000000003  Psychromonas ingrahamii 37  Bacteria  normal  0.390474  normal  0.0307837 
 
 
-
 
NC_009512  Pput_1050  two component transcriptional regulator  33.06 
 
 
260 aa  64.7  0.0000000004  Pseudomonas putida F1  Bacteria  normal  0.36572  normal 
 
 
-
 
NC_002947  PP_1012  winged helix family two component transcriptional regulator  33.06 
 
 
241 aa  64.7  0.0000000004  Pseudomonas putida KT2440  Bacteria  normal  0.0418267  normal 
 
 
-
 
NC_012918  GM21_0686  putative two component, sigma54 specific, transcriptional regulator, Fis family  28.83 
 
 
466 aa  64.7  0.0000000004  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000032274 
 
 
-
 
NC_004578  PSPTO_1290  DNA-binding response regulator  30.58 
 
 
245 aa  64.7  0.0000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1111  response regulator receiver:transcriptional regulatory protein, C-terminal  32.23 
 
 
245 aa  64.7  0.0000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.53214 
 
 
-
 
NC_009667  Oant_0471  two component transcriptional regulator  36.19 
 
 
221 aa  64.7  0.0000000004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_1114  response regulator receiver modulated serine phosphatase  34.4 
 
 
391 aa  64.7  0.0000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6147  two component transcriptional regulator, winged helix family  31.58 
 
 
244 aa  64.7  0.0000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.200947 
 
 
-
 
NC_011769  DvMF_2843  two component, sigma54 specific, transcriptional regulator, Fis family  32.35 
 
 
547 aa  64.7  0.0000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010338  Caul_2694  two component transcriptional regulator  37.61 
 
 
235 aa  64.7  0.0000000004  Caulobacter sp. K31  Bacteria  normal  0.154697  normal 
 
 
-
 
NC_009715  CCV52592_1693  two-component regulator  33.33 
 
 
223 aa  64.7  0.0000000004  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.0000232098  n/a   
 
 
-
 
NC_012917  PC1_2692  two component transcriptional regulator, winged helix family  33.91 
 
 
229 aa  64.7  0.0000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0673  putative two component, sigma54 specific, transcriptional regulator, Fis family  28.83 
 
 
474 aa  64.7  0.0000000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA0772  DNA-binding response regulator  34.75 
 
 
243 aa  64.3  0.0000000005  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0732  two component transcriptional regulator, winged helix family  30.91 
 
 
231 aa  64.3  0.0000000005  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0776  putative two component, sigma54 specific, transcriptional regulator, Fis family  34.31 
 
 
480 aa  64.3  0.0000000005  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_0003  response regulator receiver  38.46 
 
 
235 aa  64.3  0.0000000005  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2387  two component, sigma-54 specific, Fis family transcriptional regulator  36.27 
 
 
510 aa  64.7  0.0000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2232  two component, sigma54 specific, transcriptional regulator, Fis family  38.24 
 
 
509 aa  64.3  0.0000000005  Geobacter sp. M21  Bacteria  n/a    normal  0.0243568 
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  33.33 
 
 
235 aa  64.3  0.0000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_1927  two component transcriptional regulator  38.89 
 
 
232 aa  64.3  0.0000000005  Petrotoga mobilis SJ95  Bacteria  normal  0.0440711  n/a   
 
 
-
 
NC_010483  TRQ2_1561  two component transcriptional regulator  32.46 
 
 
226 aa  63.9  0.0000000006  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1512  two component transcriptional regulator  32.46 
 
 
226 aa  63.9  0.0000000006  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3564  two component transcriptional regulator  32.73 
 
 
230 aa  64.3  0.0000000006  Methylobacterium sp. 4-46  Bacteria  normal  0.153344  normal  0.125376 
 
 
-
 
NC_007947  Mfla_0716  two component transcriptional regulator  33.04 
 
 
233 aa  64.3  0.0000000006  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  32.73 
 
 
236 aa  63.9  0.0000000007  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1055  two component, sigma54 specific, Fis family transcriptional regulator  35.29 
 
 
508 aa  63.9  0.0000000007  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00334907 
 
 
-
 
NC_013512  Sdel_0235  response regulator receiver  32.35 
 
 
223 aa  63.9  0.0000000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1745  two component, sigma54 specific, transcriptional regulator, Fis family protein  35.71 
 
 
468 aa  63.9  0.0000000007  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2643  two component transcriptional regulator  33.04 
 
 
236 aa  63.9  0.0000000007  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5187  two-component response regulator PilR  35.9 
 
 
445 aa  63.5  0.0000000008  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2487  signal transduction histidine kinase with CheB and CheR activity  33.88 
 
 
1535 aa  63.9  0.0000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  0.162467  normal  0.455724 
 
 
-
 
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