Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0287 |
Symbol | |
ID | 6478072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 336218 |
End bp | 336931 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642729421 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002026675 |
Protein GI | 194364065 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0371836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.118342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGA CCCCGATTGA TGCCAGCGTC CCGGCCGCGC GCGTGCTGGT GATCGATGAT GAAACCCAGA TCCGCCGGTT CCTGGACATC AGCCTGCGCG CGCAGGGCTA CCAGGTACGA CAGGCCGCCA CCGGCCAGGA AGGCCTGCAG CTGGCCGCCA GCGAGGACAT GGATCTGGTG ATCCTGGATA TCGGCCTGCC GGACATGGAA GGCCACGAGG TACTGGAACA GCTTCGGCAG TGGAGCCAGG TGCCGGTGAT CATGCTGACC GTGCGTGCCG GCGAAACCGA GAAGGTGCGC GCGCTGGATA CAGGCGCGAA CGACTACGTG ACCAAGCCGT TCGGCACGCA GGAGCTGATG GCGCGGGTGC GGGCGCTGCT GCGCACGCGC AGCGTGCCCA GTGATGGCAC GCCGCCGGTA TTCGACGATG GCCACCTGCA TGTGGACCTG GTGCGTCGTG AAGTGGCGCT GGATGGCGAG CCGGTGGCGC TTACCCGCAA GGAATACGCG TTGCTCTCAC TGCTGCTGCG CAATGCCGGG CGAGTGGTGA CCCAGCCGCA GATCCTGCAG GAGATCTGGG GACCGACCCA CCAGCACGAC ACTCATTACC TGCGCATCCT GGTCGGCAAG CTGCGGCACA AGCTGGGCGA TTCAGCGCTG GATTCGCGCT ACCTGTTCAC CGAACCGGGC GTGGGTTTGC GGTTCAAGGG GTAG
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Protein sequence | MSPTPIDASV PAARVLVIDD ETQIRRFLDI SLRAQGYQVR QAATGQEGLQ LAASEDMDLV ILDIGLPDME GHEVLEQLRQ WSQVPVIMLT VRAGETEKVR ALDTGANDYV TKPFGTQELM ARVRALLRTR SVPSDGTPPV FDDGHLHVDL VRREVALDGE PVALTRKEYA LLSLLLRNAG RVVTQPQILQ EIWGPTHQHD THYLRILVGK LRHKLGDSAL DSRYLFTEPG VGLRFKG
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