Gene Smal_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0287 
Symbol 
ID6478072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp336218 
End bp336931 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID642729421 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002026675 
Protein GI194364065 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0371836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.118342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGA CCCCGATTGA TGCCAGCGTC CCGGCCGCGC GCGTGCTGGT GATCGATGAT 
GAAACCCAGA TCCGCCGGTT CCTGGACATC AGCCTGCGCG CGCAGGGCTA CCAGGTACGA
CAGGCCGCCA CCGGCCAGGA AGGCCTGCAG CTGGCCGCCA GCGAGGACAT GGATCTGGTG
ATCCTGGATA TCGGCCTGCC GGACATGGAA GGCCACGAGG TACTGGAACA GCTTCGGCAG
TGGAGCCAGG TGCCGGTGAT CATGCTGACC GTGCGTGCCG GCGAAACCGA GAAGGTGCGC
GCGCTGGATA CAGGCGCGAA CGACTACGTG ACCAAGCCGT TCGGCACGCA GGAGCTGATG
GCGCGGGTGC GGGCGCTGCT GCGCACGCGC AGCGTGCCCA GTGATGGCAC GCCGCCGGTA
TTCGACGATG GCCACCTGCA TGTGGACCTG GTGCGTCGTG AAGTGGCGCT GGATGGCGAG
CCGGTGGCGC TTACCCGCAA GGAATACGCG TTGCTCTCAC TGCTGCTGCG CAATGCCGGG
CGAGTGGTGA CCCAGCCGCA GATCCTGCAG GAGATCTGGG GACCGACCCA CCAGCACGAC
ACTCATTACC TGCGCATCCT GGTCGGCAAG CTGCGGCACA AGCTGGGCGA TTCAGCGCTG
GATTCGCGCT ACCTGTTCAC CGAACCGGGC GTGGGTTTGC GGTTCAAGGG GTAG
 
Protein sequence
MSPTPIDASV PAARVLVIDD ETQIRRFLDI SLRAQGYQVR QAATGQEGLQ LAASEDMDLV 
ILDIGLPDME GHEVLEQLRQ WSQVPVIMLT VRAGETEKVR ALDTGANDYV TKPFGTQELM
ARVRALLRTR SVPSDGTPPV FDDGHLHVDL VRREVALDGE PVALTRKEYA LLSLLLRNAG
RVVTQPQILQ EIWGPTHQHD THYLRILVGK LRHKLGDSAL DSRYLFTEPG VGLRFKG