| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3345 |
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| Symbol | |
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| ID | 3963044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3713339 |
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| End bp | 3714790 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637918165 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_524585 |
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| Protein GI | 89902114 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCAA ACACAACGCT GAGCAATGCC CGGATTCTGG TCGTCGATGA CGAGCCCGAC
TTGCGCACGC TGTACGAGTT GACACTGTTG CGCGAGGGTT ACAGGGTGGA AACAGCCGGC
AACCTGGCTG AGGCCTTGCA GCATCTGGGC GAGCGCCGCT TTGACGTTGT GATTACCGAC
ATGCGCCTGC CTGATGGTCT GGGCCTGGAA CTGATCCAGC AACTGCGGGC GCAACAGCGC
CCGGAGCGAT GCGTCGTCAT CACAGCCTAT GGCTCGGCAG AAAATGCCGT CGAGTCACTC
AAGACGGGCG CGTTTGACTA TCTGACCAAG CCGGTTGATC TCAAGCAGTT TCGATCCGTC
ATCGCCTCTG CCGTGCAAGA CCCGGCTCCG CGGCCAACCG CGGTCGGTCG CGCCGGCTCG
CCACTCCCTG AGAGCAGCGA TGCCGTGTTG CAGCGGCTGG TGGGGGAATC AGACAGCATG
AGGCGGGTCA AGGAGCGCAT CGTCAAGGTG GCACGCAGCA TGGCACCCGT GTTGGTGCAT
GGCGAGTCCG GCACCGGCAA GGAACTGGTG GCGCGTGCCA TTCATGCCAA CAGTCACCGC
ACCGGCAGCG CCTGGGTCGC GGTGAACTGC AGCGCGATTC CCGAGAGTCT GCTCGAAGCC
GAATTTTTTG GCTCAAAGAA AGGCGCCTAC ACAGGATCAA CCCAGGACCG CGTTGGCTTC
TTCCAGGCCG CAAGCGGTGG CACCTTGTTT CTCGATGAAA TTGGCGACCT GCCCCTGTCG
ATGCAGTCAA AGTTGCTGCG GGCCATCCAG GAGCGTTGTA TCCGCCCGAT CGGGTCGTCC
CAGGAAGAAC CGGTCGATGT CCGCATCATC AGCGCCACGC ACAAAGACCT GAGTCTGGAA
GTGTTGGCGG GCCGCTTTCG GCAGGATTTG TATTACCGTC TGGATGTCAT TGAAATTGAG
ATTGCACCAT TGCGCGAACG CCGGGAAGAC TTGCCTGCGC TGTGCCAGAC CTTGCTGCGC
CGGATCGCGT TTGAGGCGGG CATTCCGGTG CCGACACTCT CCAAAGCGGG ACTTGAACAG
CTCTCCCAAG ACCCGCTGCC CGGCAACGTG CGCGAGCTGG AGAATCTGTT GCAGCGCGCC
GTCGCCTTGA GTGACGGCGA TGAACTCCAG CTTGAACTCA CCGCTCGGCA GCCGCTGACC
CAGGACGCCT CTTTTCTGGA TAGCGGCCCG ACACCGCTGG ACGATGATCA AACCACCATC
CCCAGCGACT TGCAAAGCCA TCTCGACACT CAGGAACGCG ACATCCTGAT TCAGGCTCTG
CGTGAAACCG GCTTCAATCG CACCGCCGCA GCGGCCCGGC TCGGTTTGAG CCAGCGCCAA
ATGGGTTATC GCATTGCCAG ATTGAATATT GTTACCCCGC ACAGCGGCGA ATTGTCCGAT
GAGTCCCTTT AA
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| Protein sequence | MASNTTLSNA RILVVDDEPD LRTLYELTLL REGYRVETAG NLAEALQHLG ERRFDVVITD
MRLPDGLGLE LIQQLRAQQR PERCVVITAY GSAENAVESL KTGAFDYLTK PVDLKQFRSV
IASAVQDPAP RPTAVGRAGS PLPESSDAVL QRLVGESDSM RRVKERIVKV ARSMAPVLVH
GESGTGKELV ARAIHANSHR TGSAWVAVNC SAIPESLLEA EFFGSKKGAY TGSTQDRVGF
FQAASGGTLF LDEIGDLPLS MQSKLLRAIQ ERCIRPIGSS QEEPVDVRII SATHKDLSLE
VLAGRFRQDL YYRLDVIEIE IAPLRERRED LPALCQTLLR RIAFEAGIPV PTLSKAGLEQ
LSQDPLPGNV RELENLLQRA VALSDGDELQ LELTARQPLT QDASFLDSGP TPLDDDQTTI
PSDLQSHLDT QERDILIQAL RETGFNRTAA AARLGLSQRQ MGYRIARLNI VTPHSGELSD
ESL
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