| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_2124 |
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| Symbol | |
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| ID | 8807899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 2244135 |
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| End bp | 2245559 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_003461350 |
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| Protein GI | 289209284 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0345179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC GCCACGTCCT GGTCGTGGAC GACGAACCGG ACATCTGCGA ACTCCTCGAG
ATCACCCTCT CCCGCATGGG GATCGAGGCC ACCACGACGG AACACCTGAA CGGGGCGCGC
GAACTGCTCG CCGCGCGGGA CTTTGACCTC TGTCTGACCG ACATGCGCCT GCCCGATGGC
GACGGGCTGG ACCTCGTGCG CCACATCCAG GGTCAGCGCC CGGACCTTCC GGTGGCCGTG
ATCACGGCCC ACGGGAGTGT GGACACCGCT GTCCAGGCCC TCAAGCTGGG CGCATTCGAC
TTTGTCAGCA AGCCGGTGGA CCTGCAGCAG CTGCGCGAGC TGATTGACAC CGCACTGCGA
ATGGAACCCG CCCCCGACCT GCCCGGCGCG CTGAATACCG ACACGGTCCC GGACGCCGAA
ACCACCCGCA TCGACAGCCC CCTGCTCGGT CAGGCCCCGC CGATGCAGAC CCTGCGAGCG
ACGATCCAGA AGCTGGCGCG CAGCCAGGCA CCGGTGTTCA TCCGTGGCGA ATCCGGCTCC
GGCAAGGAGC TGGTGGCACG CGAGATCCAT CGCCTGGGGC CGCGCAGTGA TCGCCCATTT
GTGCCGGTCA ATTGCGCGGC AATCCCCGGC GAGTTGATGG AGAGCGAGTT CTTCGGCCAC
CGCAAGGGGG CCTTCACCGG GGCCACGCAG GATCACACCG GGCTGTTCCA GGCCGCCAGC
GGCGGCACGC TGTTTCTCGA CGAGGTCGCC GACCTGCCGC TGCCCATGCA GGTCAAGCTG
CTGCGCGCGA TCCAGGAACG CGCGATCAAG CCGGTCGGGG GCACGCGCGA GATCCCGGTG
GACGTGCGCC TTTTGTCGGC CACCCACCAC GACCTGGAGC GCGCGGTGGC CGAGGGGCGC
TTCCGCCAGG ACCTCTACTA CCGCCTGAAC GTGATCGAAC TGAAGGTCCC TGCGCTACGT
GAACGACGCG AGGACATCCC GGTGCTGGCC CAGTGCGTGC TGGCACGGAT CAGCGAGCAG
TGGGGTACCG AACCGCTGGA ACTGGCGCCG GACGCACTCG AGGTTCTCGC CCGGCATCCC
TTCCCGGGGA ACGTGCGCGA ACTGGAGAAC ATCCTCGAAC GCGCGGCCAC CCTCAGCGAG
GGCCCCACGA TACACGCCGA CAGCATTGAC CTGCCCCGTT CCGCACATGG CGAACCCTTG
CCATCGGCCG AGGCCCCGGG CTTTGTACCA CCCCCGCCCC GGCGCGAGAT ACCGACGGCC
ACGGCGGACG ACGTCGCCCT GGACCAGCGC CTGGCCGAGC AGGAACGCCA GGCCATCGCC
ACGGCGCTGC AGCAGACCGG CGGCAACCGC ACGGCGGCGG CGCGCCTGCT TGGGCTCAGC
TTTCGCCAGC TGCGCTATCG GCTCAAGAAG CTCGGGATCG AGTAA
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| Protein sequence | MSIRHVLVVD DEPDICELLE ITLSRMGIEA TTTEHLNGAR ELLAARDFDL CLTDMRLPDG
DGLDLVRHIQ GQRPDLPVAV ITAHGSVDTA VQALKLGAFD FVSKPVDLQQ LRELIDTALR
MEPAPDLPGA LNTDTVPDAE TTRIDSPLLG QAPPMQTLRA TIQKLARSQA PVFIRGESGS
GKELVAREIH RLGPRSDRPF VPVNCAAIPG ELMESEFFGH RKGAFTGATQ DHTGLFQAAS
GGTLFLDEVA DLPLPMQVKL LRAIQERAIK PVGGTREIPV DVRLLSATHH DLERAVAEGR
FRQDLYYRLN VIELKVPALR ERREDIPVLA QCVLARISEQ WGTEPLELAP DALEVLARHP
FPGNVRELEN ILERAATLSE GPTIHADSID LPRSAHGEPL PSAEAPGFVP PPPRREIPTA
TADDVALDQR LAEQERQAIA TALQQTGGNR TAAARLLGLS FRQLRYRLKK LGIE
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