Gene TRQ2_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1561 
Symbol 
ID6093009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp1570377 
End bp1571057 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content49% 
IMG OID642488761 
Producttwo component transcriptional regulator 
Protein accessionYP_001739580 
Protein GI170289342 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGAGTGA AGGTGCTGAT AGCTGAAGAC GACGAAGACA TAAGGAGCGT GTTGAAGAGA 
TACCTGGAAA CCGAAGGATA CGAGTGCGAC GAAGCAGAGT CCCTTTTCGA TCTCAAGAAA
AAACTCTCTG AAGGAACGTA CAACGTGCTT CTCCTCGATC TCATGTTTCC CGACGGTGTG
GCGATGGACG AAATTCCCGA GATGAAAGTT TCTCACCCGG AAATGGCCAT CATCATCATC
TCGGCAAGGG ACAGGGACAT GGACCGCATC TTTGGAATAG AGCTCGGAGC GGATGATTAC
GTGACAAAAC CTTTCAATCC AAGGGAAGTT CTCGCACGTG TGAAAGCGGT TCTGAGAAGG
ATGGGGAAAG AACAGAAGGT ACTGAGATTT GGAAGACTCG AGATCTTTCC AGAGGATTAC
ATAGTCAGAT ACGATGGAAA AAACGTTGAG ATGACAGCCA AAGAGTTCGA GCTTTTGAAA
CTCCTCGCCA CGACCCCGAA CAAGGTCTTT TCAAGAGAGG AGATCCTGAA CAGGGTGTGG
GGAGACGATT ACGTCTCTGA CAGGGTAGTG GATGTCCACA TCAGCGCCAT TCGATCGAAG
ATAGGAAAGG GATGGATAAA AACGGTGAGG GGATTGGGAT ACAAGTTTTC AACACGGGGT
GATGAGGGTG ATAGAGCTTG A
 
Protein sequence
MGVKVLIAED DEDIRSVLKR YLETEGYECD EAESLFDLKK KLSEGTYNVL LLDLMFPDGV 
AMDEIPEMKV SHPEMAIIII SARDRDMDRI FGIELGADDY VTKPFNPREV LARVKAVLRR
MGKEQKVLRF GRLEIFPEDY IVRYDGKNVE MTAKEFELLK LLATTPNKVF SREEILNRVW
GDDYVSDRVV DVHISAIRSK IGKGWIKTVR GLGYKFSTRG DEGDRA