Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4900 |
Symbol | |
ID | 8886107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5205355 |
End bp | 5206020 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003513634 |
Protein GI | 291302356 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.196174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCA TTCTGATCAT CGAGGACTCC GAGCGCATCA CCGCGTTCCT GACCAAGGGG CTGGCGGCGG CGGGGTTCAC GCCGAGCGTG GCCCACACCG GGGCCGAGGG GCTGGGGCGG GCGTTGACCG GCGAGGTGGA CCTGATCGTC CTGGACATCG GTCTGCCCGA TATGGACGGT TTCGATCTGT TGCGAGCGTT GCGGGCCGCG GGCCGGGACA CGCCGGTGAT CATCCTGACG GCGCGCGACA GCGCCACCGA CCGGGTGACG GGCCTGTCGG ACGGGGCCGA CGACTACATG CCCAAACCGT TCTCGGTGGA CGAACTGCTG GCCCGGATCC GGTTGCGGCT GCGTCCGGTC TCGGGCGGCG GCAGCGACCA GGCGGTGCTG CGGGTCGGGG ACCTGGAGCT GGACCTGCGC ACCCGGGCGG TGCGGGCCGG TGGCCGTCAG GTGGAGCTGA CCGCCCGGGA GCTGTCGCTT CTGGACACGT TGATGCGCAA CGCCGGGCAG GTGCTGTCGC GCGAGCAGCT GCTGAGCCGG GTGTGGGGTT TCGACTTCGA TCCCGGGTCC AATGTGGTGG ACGTCTACGT GCGGTACCTG CGCCGCAAGA TCGGCGCCGA CCGTATCGAA ACGGTGCGGG GCCTGGGGTA CCGGCTCACC CAATGA
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Protein sequence | MSRILIIEDS ERITAFLTKG LAAAGFTPSV AHTGAEGLGR ALTGEVDLIV LDIGLPDMDG FDLLRALRAA GRDTPVIILT ARDSATDRVT GLSDGADDYM PKPFSVDELL ARIRLRLRPV SGGGSDQAVL RVGDLELDLR TRAVRAGGRQ VELTARELSL LDTLMRNAGQ VLSREQLLSR VWGFDFDPGS NVVDVYVRYL RRKIGADRIE TVRGLGYRLT Q
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