| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2937 |
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| Symbol | |
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| ID | 9139649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3799843 |
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| End bp | 3801417 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_003630958 |
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| Protein GI | 296123180 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.726194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATG TTCTGATTGT CGACGATGAA CCGGCAATCT GCTGGGGGCT GGCGCGGCTT
TGCCGTCAAC TGGGTTGTAC GTCGACGATT GCTGCGACAG CCGAAGAGGC ACTGGAATGC
AGCCGGCGTG AGAGTTTTGA CGTGGTCTTT CTGGATGTTC GGCTGCCGGG GAAATCGGGG
CTGGAGATCC TCGAAACGAT CCGGCAGCAG AGCGCTTTCC CGAGAATTAT TGTGATGACC
GCTTATGGCC AGCTTTCGAC AGCCGTTGAT GCTGTGAGAA AAGGGGCCTT TGAGTATCTG
GTGAAGCCAT TTTCGCTCAG CCATGTGGAA CGACTGCTCG AACGGATCAT TCCTGCCACC
AATGCTGCAT CGGCAGGAAC TGATCAGGCG GCTGATTCCA CGCCCTCGTT GAACAACGCA
CAAAAGCTCG ACGAGAACCG TTTTGAGCTG AAACCCCATG AAGCCAAAGT GAATCAACTG
GTGGGTTCTT CGCCCGTCAT GCAGGAAGTT TTTCGACAGA TTGCCCTGGT GTCGGCATCG
GAAGCCTGCG TACATATTCA TGGGGAAAGT GGGACAGGCA AGGAACTCGC GGCCCGGGCG
ATTCATCATT ACAGCGGGCG AGAGAAAGGG CCTCTTGTGC CGGTCAATCT GGCGGCACTG
AATCCCGCAT TGGCTGAAAG CGAGCTGTTT GGCCATGTAA AAGGTGCCTA CACCGGAGCC
GATCTCTCGC GCCGGGGAGT CTTCGATCAG GCGGCTGGCG GTACGGTTTT CCTGGATGAA
GTGGCCGATA TTCCGCCAGC CTTGCAGGTG AAACTTTTGC GAGCACTCGA AGAGCGTGAG
ATCTGGCCTG TGGGGGCGGA TCAGCCTCAC CGCGTCGATT TTCGCTTGAT CTCGGCGACC
AATCAGAATC TGCTGGATGC TGTGCGGAGT GGTCAGTTCC GTCACGATCT GTATTACCGG
CTGGTGACGT TCCAGCTGGA GCTTCCTCCA TTGCGTGATC GCGTGGGCGA CATTCCTGAT
CTCGCCCGGC ATTTCCTCAG GCAGGTCGCG CCCAAAAGAT CCCATCTGGA ATTCACCACG
GAGTTTCTGG CAGCTTTGCA AGAGCGGCCA TGGCATGGGA ATGTGCGAGA ACTTCGCAAT
GCGATTGAAC ATGCCCTGAT CATGTCGCCA GTGGCCTCAC CCGCACCTTG GCACCTACCG
GCAGCTATGG CACCACTTGA AGTGCCGCCC GGTGCTGCGT CGCAAGTGAA TTCGGCGGCC
TCGCCATTCC ACCAGGCCAT TCCCACAGCT GAAACAAAGG GAGAACAGGA TCCGCTGACA
GTCGCTGTTC GGCAATGGGC GAAGACGAGG CTGCAGGAAG CGAAACTGCA GGCCAACCTC
GCGATTGAAG CTGCACCTCA ACTCGAAGAT GCTGGATTGC ATGCCCGCTT TCTGGCTCAA
GCAGAAGCGG AACTGTTTCA AACAATTCTG CATCAATGTC GGCAGAATAT GTCCGAAGCC
GCGAGACTTT TGGGAATTCA CCGCACGACG CTCAAGCGAA AACTCGAAGA GTTTGGGCTG
ATGGCTGATG ATTGA
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| Protein sequence | MSHVLIVDDE PAICWGLARL CRQLGCTSTI AATAEEALEC SRRESFDVVF LDVRLPGKSG
LEILETIRQQ SAFPRIIVMT AYGQLSTAVD AVRKGAFEYL VKPFSLSHVE RLLERIIPAT
NAASAGTDQA ADSTPSLNNA QKLDENRFEL KPHEAKVNQL VGSSPVMQEV FRQIALVSAS
EACVHIHGES GTGKELAARA IHHYSGREKG PLVPVNLAAL NPALAESELF GHVKGAYTGA
DLSRRGVFDQ AAGGTVFLDE VADIPPALQV KLLRALEERE IWPVGADQPH RVDFRLISAT
NQNLLDAVRS GQFRHDLYYR LVTFQLELPP LRDRVGDIPD LARHFLRQVA PKRSHLEFTT
EFLAALQERP WHGNVRELRN AIEHALIMSP VASPAPWHLP AAMAPLEVPP GAASQVNSAA
SPFHQAIPTA ETKGEQDPLT VAVRQWAKTR LQEAKLQANL AIEAAPQLED AGLHARFLAQ
AEAELFQTIL HQCRQNMSEA ARLLGIHRTT LKRKLEEFGL MADD
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